Gcaud1691.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1691.t1
Unique NameGcaud1691.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length871
Homology
BLAST of Gcaud1691.t1 vs. uniprot
Match: A0A2V3INC3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INC3_9FLOR)

HSP 1 Score: 1198 bits (3100), Expect = 0.000e+0
Identity = 631/859 (73.46%), Postives = 716/859 (83.35%), Query Frame = 0
Query:    1 MSSSPLPHVSDDLKIWSYEEAETVEDSEEPCSSAIRLPATKFPERGRNHGKDDTPPPLPPKPAFARLQSEXXXXXXXXXXXXXLGLIPQSAXXXXXXXXXXARADKPVDALGKRRSYPFSSANVATD------NAAQNFIPPPPTRPVPPVPKSDRKPSYGEEGSWVPSFPDERNPLDPPQPPEPTIVSDGDIHRSSIGMEATELNAPFLSDQLPRLKASFPQPPYPLRSYRLASTYQTLNVSEQSENLNDAALLTLSAEDAEDALYGAFAVSRRRVKHLPSSNFRRRAPVPWRPYESREPTGQAWKVLHEYLTNDSLKTHGRNRALLLLTGYVVGACLEGMETGINLLTEIVRRMRGAERSERDGSAFTLLVNIAAHASFVKGSAWSRVEEVARKVFSDVVEDMHGRQDDDVMWERALRCYLFLLKSSDKHPSINISSKCLAALALRMNELTHTDVDHVLICNGLYPRLHETWDEFLTSAKLNMDYLEDVGGLQTVLTLFADTFSPSARRQLFVLIYDFAVLKYLEGLTEDVVVRHRDNIDSFRALLECHEMENVLTHVFKVGPWDGFVVDMLRVLLFNSLTIEYLGTRTENSSDEDQNVGRRAFQEKTGSASESDSRLGSQVGKPYRVPASRYISSSRALVKYLDKPFCISVLREIEAMAIHHSKFLFQRETMDHAREWKILRETYFTILRFTFARRGVVDGELSDVLNKLYASVVEITSCRSSVKGLLRMSEMIIEFFVVTTPFVPRSKSRSLQWDSTSKMILKGSVSVPRQVLLEANPSMFSLLLLASNVKVPCKRLSESRQCLIEFLGASKGGSSVVTPFVEDNDPIVAYRATELINSQSEVDRNSEATAGQSK 853
            MSSSPLP++  DL++WSYEEAE+V+DSE PCSS IRLP T FPER R   +D TPPPLP           XXXXXXXXXXXXX+GLIPQSAXXXXXXXXXX   ++P DALGKRRSYPFSSAN +        N   + +PPPP+RP+PPVP+SDRKPSYGEE SWVPSFPDER+PLDPPQPPEPTI+SDGD+ RSSIGMEATE N  +LSDQLP+LK   PQPPYP++ +R+AS +QTLNVS+++EN+N+ AL TLS E AEDALYGAFAVSRRR+K      F R+APVPW PYE  EPTGQAWKVLHEYLTN+SLKT+GRN ALLLL GYVVGACL+GMETGINLLTEIVRRMRGAERSERDGS FTLLVNI AHASFVKG+  SRVEEVARKVFSDVVEDMHGRQDDDVMWERALRCYLFLLKSSDK+PSINISS+CLAALAL M +LTHTDVD VLIC GL+PRLH TWDEFLTSA+LNMD  +++GGL+TVLTLFADT SPSAR +LF LIYDFAVLK LEGLTEDVV+R RDNID+FRALL+ HEMENVLT+VFKVG W+ FVVD+LR+LLF+ LT+EYLG R ENSSDEDQ VG++AFQEKTGS+S SDSRLGSQVG+PYR PASRYISS+RALVKYLDKPFC+ VLREIE+MA HHS+FLFQRETM HAREWKIL  T+  IL F FA R      LSD LNK+Y SVVEITS RSS+KGLL M E++IEFF VT PFV RS+ RS Q+DS  +M LKGSVSVPRQ+L EA+PSMFSLLLLA+  K   KRLS+SRQCL+EFLG S+ G  ++ PF EDNDPI+AYRA+E++N   E   +S     Q K
Sbjct:    1 MSSSPLPNLGTDLRLWSYEEAESVDDSEAPCSSVIRLPPTTFPERSRGTAQDTTPPPLPXXXXXXXXXXXXXXXXXXXXXXXXIGLIPQSAXXXXXXXXXXXXVERPADALGKRRSYPFSSANTSEQQKPNDSNVLSSILPPPPSRPLPPVPRSDRKPSYGEESSWVPSFPDERSPLDPPQPPEPTILSDGDVRRSSIGMEATEQNLAYLSDQLPKLKPMLPQPPYPVQCHRVASMFQTLNVSDENENVNEEALFTLSTESAEDALYGAFAVSRRRMKQDLHLGFIRKAPVPWHPYERFEPTGQAWKVLHEYLTNNSLKTYGRNSALLLLAGYVVGACLDGMETGINLLTEIVRRMRGAERSERDGSVFTLLVNIGAHASFVKGACSSRVEEVARKVFSDVVEDMHGRQDDDVMWERALRCYLFLLKSSDKYPSINISSQCLAALALHMGDLTHTDVDRVLICEGLFPRLHHTWDEFLTSAQLNMDCFDEIGGLKTVLTLFADTTSPSARNRLFNLIYDFAVLKCLEGLTEDVVLRLRDNIDTFRALLDGHEMENVLTNVFKVGTWENFVVDVLRLLLFSPLTVEYLGARAENSSDEDQPVGKKAFQEKTGSSSMSDSRLGSQVGRPYRTPASRYISSTRALVKYLDKPFCLRVLREIESMATHHSRFLFQRETMHHAREWKILCATHSDILNFVFASRAEARSALSDALNKIYTSVVEITSGRSSMKGLLHMCEIVIEFFAVTVPFVSRSRFRSNQFDSIPRMFLKGSVSVPRQLLQEADPSMFSLLLLATRTKATSKRLSDSRQCLVEFLGISRDGEQILKPFTEDNDPIIAYRASEVVNKHGEPHLDSSVVLEQGK 859          
BLAST of Gcaud1691.t1 vs. uniprot
Match: A0A2V3ID39_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID39_9FLOR)

HSP 1 Score: 865 bits (2235), Expect = 1.520e-307
Identity = 436/575 (75.83%), Postives = 489/575 (85.04%), Query Frame = 0
Query:  279 FRRRAPVPWRPYESREPTGQAWKVLHEYLTNDSLKTHGRNRALLLLTGYVVGACLEGMETGINLLTEIVRRMRGAERSERDGSAFTLLVNIAAHASFVKGSAWSRVEEVARKVFSDVVEDMHGRQDDDVMWERALRCYLFLLKSSDKHPSINISSKCLAALALRMNELTHTDVDHVLICNGLYPRLHETWDEFLTSAKLNMDYLEDVGGLQTVLTLFADTFSPSARRQLFVLIYDFAVLKYLEGLTEDVVVRHRDNIDSFRALLECHEMENVLTHVFKVGPWDGFVVDMLRVLLFNSLTIEYLGTRTENSSDEDQNVGRRAFQEKTGSASESDSRLGSQVGKPYRVPASRYISSSRALVKYLDKPFCISVLREIEAMAIHHSKFLFQRETMDHAREWKILRETYFTILRFTFARRGVVDGELSDVLNKLYASVVEITSCRSSVKGLLRMSEMIIEFFVVTTPFVPRSKSRSLQWDSTSKMILKGSVSVPRQVLLEANPSMFSLLLLASNVKVPCKRLSESRQCLIEFLGASKGGSSVVTPFVEDNDPIVAYRATELINSQSEVDRNSEATAGQSK 853
            F R+APVPW PYES EPTGQAWKVLHEYLTN+SLKTHGRN ALLLL GYVVGACL+GMETGINLLT IVRRMRGAERSERDGS FTLLVNI AHASFVKG+  SRVEEVARKVFSDV EDMHGRQDDDVMWERALRCYLFLLKSSDK+PSINISS+CLAALAL M +LTHTDVDHVLIC GL+PRLH TWDEFLTSA+LNM+  +++GGL+TVLTLFADT SPSAR +LF LIYDFAVLK LEGLTEDVV+R RDNID+FRALL+ HEMENVLT+VFKVG W+ FVVD+LR+LLF+ LT+EYLG R ENSSDEDQ VG +AFQEKTGS+S SDSRLGSQVG+PYR PASRYISS+RALVKYLDKPFC+ VLREIE+MA HHS+FLFQRETM HAREWKIL  T+  IL F FA RG     LSD LNK+Y SVVE+TS RSS+KGLL M E++IEFF VT PFV  S+ RS Q+DS  +M  KGSVSVPRQ+L EA+PSMFSLLLLA+  K   KRLS+SRQCL+EFLG S+ G  ++ PF EDNDPI+AYRA+E++N   E   +S     Q K
Sbjct:    9 FIRKAPVPWHPYESFEPTGQAWKVLHEYLTNNSLKTHGRNSALLLLAGYVVGACLDGMETGINLLTGIVRRMRGAERSERDGSVFTLLVNIGAHASFVKGAFSSRVEEVARKVFSDVAEDMHGRQDDDVMWERALRCYLFLLKSSDKYPSINISSQCLAALALHMGDLTHTDVDHVLICEGLFPRLHHTWDEFLTSAQLNMNCFDEIGGLKTVLTLFADTTSPSARNRLFNLIYDFAVLKCLEGLTEDVVLRLRDNIDTFRALLDGHEMENVLTNVFKVGAWENFVVDVLRLLLFSPLTVEYLGARAENSSDEDQPVGNKAFQEKTGSSSMSDSRLGSQVGRPYRTPASRYISSTRALVKYLDKPFCLRVLREIESMATHHSRFLFQRETMHHAREWKILCATHSDILNFVFASRGEARSALSDALNKIYTSVVEMTSGRSSMKGLLHMCEIVIEFFTVTVPFVSHSRFRSNQFDSIPRMFFKGSVSVPRQLLQEADPSMFSLLLLATRTKATSKRLSDSRQCLVEFLGISRDGEQILKPFTEDNDPIIAYRASEVVNKHREPRLDSSVVLEQGK 583          
BLAST of Gcaud1691.t1 vs. uniprot
Match: R7QFD0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFD0_CHOCR)

HSP 1 Score: 690 bits (1781), Expect = 6.740e-235
Identity = 401/827 (48.49%), Postives = 533/827 (64.45%), Query Frame = 0
Query:   17 SYEEAETVEDSEEPCSSAIRLPATKFPERGRNHGKDDTPPPLPPKPAFARLQSEXXXXXXXXXXXXXLGLIPQSAXXXXXXXXXXARADKPVDALGKRRSYPFSS----ANVATDNAAQNFIPPPPTRPVPPVPKSDRKPSYGEEGSWVPSFPDERNPLDPPQPPEPTIVSDGDIHRSSIGMEATELNAPFLSDQLPRLKASFPQPPYPLRSYRLASTYQTLNVSEQSENLNDAALLTLSAEDAEDALYGAFAVSRRRVKHLPSSNFRRRAPVPWRPYESREPTGQAWKVLHEYLTNDSLKTHGRNRALLLLTGYVVGACLEGMETGINLLTEIVRRMRGAERSERDGSAFTLLVNIAAHASFVKGSAWSRVEEVARKVFSDVVEDMHGRQDDDVMWERALRCYLFLLKSSDKHPSINISSKCLAALALRMNELTHTDVDHVLICNGLYPRLHETWDEFLTSAKLNMDY--LEDVGGLQTVLTLFADTFSPSARRQLFVLIYDFAVLKYLEGLTEDVVVRHRDNIDSFRALLECHEMENVLTHVFKVGPWDGFVVDMLRVLLFNSLTIEYLGTRTENSSDEDQNVGRRAFQEKTGSASESDSRLGSQVGKPYRVPASRYISSSRALVKYLDKPFCISVLREIEAMAIHHSKFLFQRETMDHAREWKILRETYFTILRFTFARRGVVDGELSDVLNKLYASVVEITSCRSSVKGLLRMSEMIIEFFVVTTPFVPR-SKSRSLQWDSTSKMILKGSVSVPRQVLLEANPSMFSLLLLASNVKVPCKRLSESRQCLIEFLGASKGGSSVVTPFVEDNDPIVAYRATELIN 836
            S EE E++ +SEEP SS IRLP       G +    + PPPLPPKP+FAR  +                +   + XXXXXXXXXX   +K VD   + R     S    +    D  +Q     PP+RPVP VP SDRKPSYGEEGSW+PS  DER+  DPP PPEPTIVS+GD+ RSS G   T   +    + +P L    P PPY  + YR +S +  +  S+Q E       L+LS   AED+  GA  +S++R+K +     + RAPV WR Y   E  G+AW VLHEYLTN +LK HGRNRAL LLTGYVV ACLEG E G  LL++IVRRMRGAERSERDGS FT+L+NIAAH SFV  S+W+ VE VA+KVFS+VVE MHGRQDD VMW+RALRC+L LL++S++ PS  ISS+CL+ALAL + +LTHTDVDHVL+  G+Y RL+   D+ L ++   +DY  +E++GGL TVLT++ DT S S R+ LF +IYD AV   LE  ++  V   RD+I +FRALLE  EM     H F+VGPW  FV+D +R+LLF+ L  + + + T   +++     R   +EK  S+S S +RL   +G+ Y+   SRY+ S R +V+ LDKPFC+ V++++E MAI H+  L +RET   AREW+IL E    + RF F+R    +  L++ L K Y + V++TS R ++  +LR+SEMII+FF V  PF  R S   ++  DS  KM LKG   V +++L +ANPS+F+LLLLA+  K P +RLSE RQCLIEFLG+++    ++ PFV++ D  VAYRA EL++
Sbjct:   20 SAEEYESIPESEEPLSSGIRLPRANPQPDGSSFALKNAPPPLPPKPSFARGSA----------------IHNPAXXXXXXXXXXXXXXEKIVDLPQRTRPATNFSLHRHSGTDFDEISQGAALLPPSRPVPAVPSSDRKPSYGEEGSWLPSNMDERSQFDPPFPPEPTIVSEGDLMRSSGGPVDTSTQS--FIEHIPNLTLPLPLPPYSAQRYRTSSMFPPIPRSDQHEGNLTEGFLSLSISSAEDSQVGAVVLSQQRLKGIAPLPIQNRAPVKWRFYPRNESGGEAWSVLHEYLTNTALKAHGRNRALQLLTGYVVSACLEGFEAGYGLLSQIVRRMRGAERSERDGSIFTILINIAAHTSFVHKSSWASVEGVAQKVFSEVVEHMHGRQDDYVMWDRALRCFLVLLRASNRRPSERISSRCLSALALHVGDLTHTDVDHVLVNEGIYQRLYSLPDDSLGTS---VDYGCMEEIGGLDTVLTIYTDTASSSVRQGLFRVIYDVAVRICLENTSQADVDILRDHIVTFRALLEVCEMSECFVHTFRVGPWPDFVMDTIRLLLFDPLGWKSMDSLTGRINEDSSANDRTVLREKAESSSISGTRLSGTIGRAYQSSVSRYVVSIRTMVRLLDKPFCLKVIQQLEKMAIEHAARLSKRETTHFAREWRILCEIESQLQRFIFSREEESEWSLTETLTKFYVATVDMTSGRCNLGSVLRLSEMIIDFFAVKVPFSKRTSVLANVAVDSGPKMFLKGQFLVSKELLEKANPSIFTLLLLATKTKRPSQRLSECRQCLIEFLGSNQKRVELLQPFVQEEDAAVAYRAGELVS 825          
BLAST of Gcaud1691.t1 vs. uniprot
Match: A0A2V3IFL8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFL8_9FLOR)

HSP 1 Score: 281 bits (720), Expect = 2.330e-85
Identity = 165/239 (69.04%), Postives = 191/239 (79.92%), Query Frame = 0
Query:    1 MSSSPLPHVSDDLKIWSYEEAETVEDSEEPCSSAIRLPATKFPERGRNHGKDDTPPPLPPKPAFARLQSEXXXXXXXXXXXXXLGLIPQSAXXXXXXXXXXARADKPVDALGKRRSYPFSSANVAT------DNAAQNFIPPPPTRPVPPVPKSDRKPSYGEEGSWVPSFPDERNPLDPPQPPEPTIVSDGDIHRSSIGMEATELNAPFLSDQLPRLKASFPQPPYPLRSYRLASTYQT 233
            MSSSPLP++S DL++WSYEEAE+V+DSE PCSS IRLP T FPER R   +D TPPPLP           XXXXXXXXXXXXX+GLIPQSAXXXXXXXXXX   ++P DALGKRRSYPFSSAN +        N   + +PPPP+RP+PPVP+SDRKPSYGEE SWVPSFPDER+PLDPPQPPEPTI+SDGD+ RSSIGMEATE N  +LSDQLP+LK   PQPPYP++ +R+AS +QT
Sbjct:    1 MSSSPLPNLSTDLRLWSYEEAESVDDSEAPCSSVIRLPPTTFPERSRGAAQDTTPPPLPXXXXXXXXXXXXXXXXXXXXXXXXIGLIPQSAXXXXXXXXXXXXVERPADALGKRRSYPFSSANTSEHQKPNDSNVLPSILPPPPSRPLPPVPRSDRKPSYGEESSWVPSFPDERSPLDPPQPPEPTILSDGDVRRSSIGMEATEQNLAYLSDQLPKLKPRLPQPPYPVQCHRVASMFQT 239          
The following BLAST results are available for this feature:
BLAST of Gcaud1691.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3INC3_9FLOR0.000e+073.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID39_9FLOR1.520e-30775.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QFD0_CHOCR6.740e-23548.49Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IFL8_9FLOR2.330e-8569.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 839..870

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_676_length_19860_cov_4.402802contigNODE_676_length_19860_cov_4.402802:7357..9969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1691.t1Gcaud1691.t1Gracilaria caudata M_176_S67 malemRNANODE_676_length_19860_cov_4.402802 7357..9969 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1691.t1 ID=Gcaud1691.t1|Name=Gcaud1691.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=871bp
MSSSPLPHVSDDLKIWSYEEAETVEDSEEPCSSAIRLPATKFPERGRNHG
KDDTPPPLPPKPAFARLQSETPPPLPPKPDFIRLGLIPQSAPPPLPPKPD
FARADKPVDALGKRRSYPFSSANVATDNAAQNFIPPPPTRPVPPVPKSDR
KPSYGEEGSWVPSFPDERNPLDPPQPPEPTIVSDGDIHRSSIGMEATELN
APFLSDQLPRLKASFPQPPYPLRSYRLASTYQTLNVSEQSENLNDAALLT
LSAEDAEDALYGAFAVSRRRVKHLPSSNFRRRAPVPWRPYESREPTGQAW
KVLHEYLTNDSLKTHGRNRALLLLTGYVVGACLEGMETGINLLTEIVRRM
RGAERSERDGSAFTLLVNIAAHASFVKGSAWSRVEEVARKVFSDVVEDMH
GRQDDDVMWERALRCYLFLLKSSDKHPSINISSKCLAALALRMNELTHTD
VDHVLICNGLYPRLHETWDEFLTSAKLNMDYLEDVGGLQTVLTLFADTFS
PSARRQLFVLIYDFAVLKYLEGLTEDVVVRHRDNIDSFRALLECHEMENV
LTHVFKVGPWDGFVVDMLRVLLFNSLTIEYLGTRTENSSDEDQNVGRRAF
QEKTGSASESDSRLGSQVGKPYRVPASRYISSSRALVKYLDKPFCISVLR
EIEAMAIHHSKFLFQRETMDHAREWKILRETYFTILRFTFARRGVVDGEL
SDVLNKLYASVVEITSCRSSVKGLLRMSEMIIEFFVVTTPFVPRSKSRSL
QWDSTSKMILKGSVSVPRQVLLEANPSMFSLLLLASNVKVPCKRLSESRQ
CLIEFLGASKGGSSVVTPFVEDNDPIVAYRATELINSQSEVDRNSEATAG
QSKLKCGSQENPQDSGPQDV*
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