Gcaud169.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud169.t1
Unique NameGcaud169.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length311
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud169.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..177
NoneNo IPR availableCOILSCoilCoilcoord: 45..79
NoneNo IPR availableCOILSCoilCoilcoord: 209..229
NoneNo IPR availableCOILSCoilCoilcoord: 248..268
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..310
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 46..189
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1883_length_7897_cov_5.365744contigNODE_1883_length_7897_cov_5.365744:5108..6040 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud169.t1Gcaud169.t1Gracilaria caudata M_176_S67 malemRNANODE_1883_length_7897_cov_5.365744 5108..6040 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud169.t1 ID=Gcaud169.t1|Name=Gcaud169.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=311bp
MFKAMQNTIYSLVIPSVTAVVGVSAAHFYYRSMFEKLNSETGQLFDEKDK
EVRGLQSQNSDLEHRNKTLSCALEECEKRYGVSQRNLEVSVEEKQMITSQ
RDEAIANRNTAVENLESCEVEKELASIHLRRSEQEISELHAELERASQNA
LEMNNECTRLTEEANILEEESHNLKILSANRGDEIDSHLLTIRHLNDYIA
EMGDKDVSIQSLREHISTLEATLSQQQSQLLAYEEYLGQTEKRHQAQLDF
CLEKIQALLQEREDESRELKTFLTTHPHLDIDIALTLNADRRQQSAGSGL
SSGSSSSFSL*
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