Gcaud1686.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud1686.t1 vs. uniprot
Match: PSB28_GRATL (Photosystem II reaction center Psb28 protein n=26 Tax=Gracilariaceae TaxID=31469 RepID=PSB28_GRATL) HSP 1 Score: 219 bits (557), Expect = 4.340e-72 Identity = 106/113 (93.81%), Postives = 112/113 (99.12%), Query Frame = 0
Query: 1 MAVIQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILRSGMENKGDITGMYLQDDEGELMTRDVSAKFVNGKPQAIEAIYIIKNPQEWDRFMRFMEKYANRNKLSFTKA 113
MAVIQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDIL+SGME+KGDITGMYL+DDEGELMTRDVSAKF+NGKPQA+EAIYIIK+PQEWDRFMRFMEKYAN NKLSFTKA
Sbjct: 1 MAVIQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILKSGMEDKGDITGMYLKDDEGELMTRDVSAKFINGKPQAVEAIYIIKSPQEWDRFMRFMEKYANENKLSFTKA 113
BLAST of Gcaud1686.t1 vs. uniprot
Match: A0A345U974_9FLOR (Photosystem II reaction center Psb28 protein n=1 Tax=Agarophyton vermiculophyllum TaxID=2608709 RepID=A0A345U974_9FLOR) HSP 1 Score: 208 bits (530), Expect = 5.700e-68 Identity = 100/113 (88.50%), Postives = 111/113 (98.23%), Query Frame = 0
Query: 1 MAVIQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILRSGMENKGDITGMYLQDDEGELMTRDVSAKFVNGKPQAIEAIYIIKNPQEWDRFMRFMEKYANRNKLSFTKA 113
MAVIQFI+GINETVVADVSLTRSRDGS+GTATFRFN+PDIL+S M++KGDITGMYL+DDEGELMTRDVSAKF+NGKPQAIEA+Y+IK+PQEWDRFMRFMEKYAN NKLSFTKA
Sbjct: 1 MAVIQFIRGINETVVADVSLTRSRDGSQGTATFRFNSPDILQSSMQDKGDITGMYLKDDEGELMTRDVSAKFINGKPQAIEALYLIKSPQEWDRFMRFMEKYANDNKLSFTKA 113
BLAST of Gcaud1686.t1 vs. uniprot
Match: A0A0C5DHH8_GRALE (Photosystem II reaction center Psb28 protein n=6 Tax=Gracilariopsis TaxID=2781 RepID=A0A0C5DHH8_GRALE) HSP 1 Score: 204 bits (518), Expect = 3.850e-66 Identity = 98/113 (86.73%), Postives = 109/113 (96.46%), Query Frame = 0
Query: 1 MAVIQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILRSGMENKGDITGMYLQDDEGELMTRDVSAKFVNGKPQAIEAIYIIKNPQEWDRFMRFMEKYANRNKLSFTKA 113
MAVIQFIKGINETV+ADVSLTRS+DGS GTATFRFNNPDIL+S M+ KGDITGMYL+DDEGEL+TRDVSAKFVNGKPQAI +IYIIK+PQEWDRFMRFME+YAN+N+LSFTKA
Sbjct: 1 MAVIQFIKGINETVIADVSLTRSKDGSTGTATFRFNNPDILKSVMQEKGDITGMYLKDDEGELVTRDVSAKFVNGKPQAITSIYIIKSPQEWDRFMRFMERYANKNQLSFTKA 113
BLAST of Gcaud1686.t1 vs. uniprot
Match: A0A345UAZ2_9FLOR (Photosystem II reaction center Psb28 protein n=1 Tax=Melanthalia intermedia TaxID=172989 RepID=A0A345UAZ2_9FLOR) HSP 1 Score: 203 bits (517), Expect = 5.480e-66 Identity = 98/113 (86.73%), Postives = 110/113 (97.35%), Query Frame = 0
Query: 1 MAVIQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILRSGMENKGDITGMYLQDDEGELMTRDVSAKFVNGKPQAIEAIYIIKNPQEWDRFMRFMEKYANRNKLSFTKA 113
MA IQFIKGINETV+A+VSLTRSRDGSKGTATFRF+NPDIL+SGME+KGDITGMYL+D+EGEL+TRDVSAKFVNGKP+AIEA+YIIK PQEWDRFMRFME+YAN N+LSFTKA
Sbjct: 1 MASIQFIKGINETVIANVSLTRSRDGSKGTATFRFDNPDILKSGMEDKGDITGMYLKDNEGELVTRDVSAKFVNGKPRAIEAVYIIKTPQEWDRFMRFMEQYANDNELSFTKA 113
BLAST of Gcaud1686.t1 vs. uniprot
Match: A0A1C9CB89_9FLOR (Photosystem II reaction center Psb28 protein n=1 Tax=Ahnfeltia plicata TaxID=28023 RepID=A0A1C9CB89_9FLOR) HSP 1 Score: 194 bits (494), Expect = 1.760e-62 Identity = 92/113 (81.42%), Postives = 105/113 (92.92%), Query Frame = 0
Query: 1 MAVIQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILRSGMENKGDITGMYLQDDEGELMTRDVSAKFVNGKPQAIEAIYIIKNPQEWDRFMRFMEKYANRNKLSFTKA 113
MAVIQFI+GINET+V DV LTRSRDGS GTATFRFNNPDIL S ME+KGDITGMYL+D+EGEL+TRDV+AKF+NGKPQAIE++YIIK+P +WDRFMRFME+YAN N LSFTKA
Sbjct: 1 MAVIQFIQGINETIVPDVKLTRSRDGSTGTATFRFNNPDILMSKMESKGDITGMYLKDEEGELVTRDVNAKFINGKPQAIESVYIIKSPDDWDRFMRFMERYANDNNLSFTKA 113
BLAST of Gcaud1686.t1 vs. uniprot
Match: A0A1G4NXW4_9FLOR (Photosystem II reaction center Psb28 protein n=2 Tax=Nemaliales TaxID=2807 RepID=A0A1G4NXW4_9FLOR) HSP 1 Score: 192 bits (488), Expect = 1.500e-61 Identity = 92/113 (81.42%), Postives = 101/113 (89.38%), Query Frame = 0
Query: 1 MAVIQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILRSGMENKGDITGMYLQDDEGELMTRDVSAKFVNGKPQAIEAIYIIKNPQEWDRFMRFMEKYANRNKLSFTKA 113
MAVIQFIKGINE+VV DV LTRSRDGS GTATFRF NP IL S MENKGDITGMYL D+EGEL+TRDV+AKF+NG+PQAIE +YIIKNP+ WDRFMRFME+YAN N LSFTKA
Sbjct: 1 MAVIQFIKGINESVVPDVKLTRSRDGSTGTATFRFTNPTILDSSMENKGDITGMYLLDEEGELITRDVNAKFINGRPQAIECVYIIKNPENWDRFMRFMERYANENSLSFTKA 113
BLAST of Gcaud1686.t1 vs. uniprot
Match: A0A6M3WWC8_PTELU (Photosystem II reaction center Psb28 protein n=1 Tax=Pterocladia lucida TaxID=31408 RepID=A0A6M3WWC8_PTELU) HSP 1 Score: 192 bits (487), Expect = 2.130e-61 Identity = 89/113 (78.76%), Postives = 107/113 (94.69%), Query Frame = 0
Query: 1 MAVIQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILRSGMENKGDITGMYLQDDEGELMTRDVSAKFVNGKPQAIEAIYIIKNPQEWDRFMRFMEKYANRNKLSFTKA 113
MA+IQFI+GINETV+ DV LTRSRDGS GTATFRFNNPDILR ME+KGDITGMYL+DDEG+++T+DV+AKF+NGKP+AIEAIYIIK+P++WDRFMRFM+KYA+ N+LSFTKA
Sbjct: 1 MALIQFIQGINETVIPDVKLTRSRDGSTGTATFRFNNPDILRPDMEDKGDITGMYLKDDEGDMITKDVNAKFINGKPEAIEAIYIIKSPRDWDRFMRFMDKYADDNELSFTKA 113
BLAST of Gcaud1686.t1 vs. uniprot
Match: A0A1Z1MKN9_SPYFI (Photosystem II reaction center Psb28 protein n=1 Tax=Spyridia filamentosa TaxID=196632 RepID=A0A1Z1MKN9_SPYFI) HSP 1 Score: 191 bits (486), Expect = 2.920e-61 Identity = 92/114 (80.70%), Postives = 101/114 (88.60%), Query Frame = 0
Query: 1 MAVIQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILRSGMENKGDITGMYLQDDEGELMTRDVSAKFVNGKPQAIEAIYIIKNPQEWDRFMRFMEKYANRNKLSFTKAN 114
MA IQFIKGI ET VADVSLTRS+DGS GTA FRFNNPDIL+SGME KGDI GMYL D+EGELMT DVSAKF+NGKPQ IE +YIIK+P+EWDRFMRFME+YAN N LSFTKA+
Sbjct: 1 MAFIQFIKGIKETTVADVSLTRSKDGSTGTAKFRFNNPDILQSGMEKKGDIKGMYLNDEEGELMTTDVSAKFINGKPQGIECLYIIKSPEEWDRFMRFMERYANINNLSFTKAS 114
BLAST of Gcaud1686.t1 vs. uniprot
Match: A0A6H1U8S6_9FLOR (Photosystem II reaction center Psb28 protein n=1 Tax=Caulacanthus okamurae TaxID=152008 RepID=A0A6H1U8S6_9FLOR) HSP 1 Score: 190 bits (482), Expect = 1.310e-60 Identity = 88/114 (77.19%), Postives = 105/114 (92.11%), Query Frame = 0
Query: 1 MAVIQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILRSGMENKGDITGMYLQDDEGELMTRDVSAKFVNGKPQAIEAIYIIKNPQEWDRFMRFMEKYANRNKLSFTKAN 114
MA IQFI+GINETVVADV LTRS+DGS GTATFRFNNPDIL+S M++KGDITGMYL D+EG ++T++V+AKF+NGKPQAIEA YIIK+P++WDRFMRFME+Y N N+LSFTKAN
Sbjct: 4 MANIQFIQGINETVVADVKLTRSKDGSNGTATFRFNNPDILKSDMQDKGDITGMYLNDEEGSMVTKEVNAKFINGKPQAIEATYIIKSPKDWDRFMRFMERYGNENELSFTKAN 117
BLAST of Gcaud1686.t1 vs. uniprot
Match: A0A141SD41_9FLOR (Photosystem II reaction center Psb28 protein n=1 Tax=Sporolithon durum TaxID=48970 RepID=A0A141SD41_9FLOR) HSP 1 Score: 189 bits (481), Expect = 1.640e-60 Identity = 89/113 (78.76%), Postives = 103/113 (91.15%), Query Frame = 0
Query: 1 MAVIQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILRSGMENKGDITGMYLQDDEGELMTRDVSAKFVNGKPQAIEAIYIIKNPQEWDRFMRFMEKYANRNKLSFTKA 113
MA IQFI+GINE VV D+ LTRSRDGS GTATFRFN+PDIL S M+NKGDITGMYL+D+EGEL+TRDV+AKFVNGKP+AIE++YIIKNP+ WDRFMRFME+Y+N N LSFTKA
Sbjct: 1 MATIQFIRGINERVVPDIKLTRSRDGSTGTATFRFNSPDILMSNMKNKGDITGMYLKDEEGELVTRDVNAKFVNGKPKAIESVYIIKNPENWDRFMRFMERYSNDNDLSFTKA 113 The following BLAST results are available for this feature:
BLAST of Gcaud1686.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud1686.t1 ID=Gcaud1686.t1|Name=Gcaud1686.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=115bpback to top |