Gcaud1677.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud1677.t1 vs. uniprot
Match: A0A2V3IRS4_9FLOR (Exosome complex component RRP46 n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRS4_9FLOR) HSP 1 Score: 375 bits (963), Expect = 3.750e-129 Identity = 193/262 (73.66%), Postives = 229/262 (87.40%), Query Frame = 0
Query: 1 MDVDTPPFRGQGTGVDAMLGMRTETNAGRRDGRAQGEMRAMTVSHGELSRADGSARIKLGGTDVIVAIYGPMDCPHNKQQVEALHVHVAYRRREAMGAALAAANSATSNESVLTRDLQATVTDVVLTALHPRKAVVVAVQVLSDNGGVVAASINATSMALLDAGLPMRALPLAASVSIHNNALIVDPVLVEEREAHAVITITIDTALEKDDGFMSVYTIGDCGGEEIFAAAVAVCRQLVVKTRAFLRLGLEQKAAIRQIWNA 262
MD D+ FRG+G+GVDAMLGMRTE+ AGRRDGR+ GEMRAM+VS+GEL+RADGSAR++LG TDV+VAIYGP++CPHNKQ EA+HVHVA+ RREAM +A A + ES++TRDL+A V+DVVL LHPRKAVVVAVQVL+D+GGV+ A+INAT++AL+DAGLP+RALPLAASVSIHNNA+IVDPV+VEEREA AV+ I DTALE DDGFMSVYT+GDCGGEE+FAA V VCRQLVVKTRAF RL LE+KAA+ IWNA
Sbjct: 1 MDADSLSFRGEGSGVDAMLGMRTESTAGRRDGRSHGEMRAMSVSYGELTRADGSARVRLGTTDVLVAIYGPIECPHNKQDAEAVHVHVAFGRREAMSN-VAGAETGAGTESMITRDLEALVSDVVLATLHPRKAVVVAVQVLADSGGVICAAINATTIALIDAGLPLRALPLAASVSIHNNAIIVDPVVVEEREADAVVCIVFDTALENDDGFMSVYTMGDCGGEELFAATVEVCRQLVVKTRAFFRLSLERKAAVHHIWNA 261
BLAST of Gcaud1677.t1 vs. uniprot
Match: R7Q866_CHOCR (Exosome component 5 Rrp46 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q866_CHOCR) HSP 1 Score: 275 bits (704), Expect = 1.280e-89 Identity = 150/263 (57.03%), Postives = 191/263 (72.62%), Query Frame = 0
Query: 4 DTPPFRGQGTGVDAMLGMRTETNAGRRDGRAQGEMRAMTVSHGELSRADGSARIKLGGTDVIVAIYGPMDCPHNKQQVEALHVHVAYRRREAMGAALAAANSATSN---ESVLTRDLQATVTDVVLTALHPRKAVVVAVQVLSDNGGVVAASINATSMALLDAGLPMRALPLAASVSIHNNALIVDPVLVEEREAHAVITITIDTALEKDDGFMSVYTIGDCGGEEIFAAAVAVCRQLVVKTRAFLRLGLEQKAAIRQIWNAS 263
D F G GTGVDAM G T +AGRRDGR+ EMR++++SHG L ADGSAR++LG TDV+VA+YGPM CP +Q E +HV VA+RRR + A + N E++ RDL+ V ++V+ LHPRKA VVAVQVL+DNGGV+AA+IN T MAL+DAG+PMRA+P AASVS++N A++VDPVL+EE EA VIT DT+L ++GFMSVYT GDC G+ +FAAA+ R L +KT AFL+L LEQKAA R WN +
Sbjct: 12 DALEFSGVGTGVDAMSG--TPLSAGRRDGRSASEMRSLSISHGPLVAADGSARVRLGATDVVVAVYGPMGCPVPRQDAEQMHVSVAFRRRAGTTSGGAGGKGDSINAGKEAIAGRDLKKVVEEIVMAILHPRKAAVVAVQVLADNGGVIAAAINGTVMALVDAGMPMRAVPSAASVSLYNGAIVVDPVLIEEVEADGVITFVFDTSLADENGFMSVYTDGDCTGDSMFAAALETSRDLALKTMAFLKLSLEQKAAQRLTWNTT 272
BLAST of Gcaud1677.t1 vs. uniprot
Match: UPI001E1DA4FB (exosome complex component RRP41-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA4FB) HSP 1 Score: 194 bits (494), Expect = 5.700e-58 Identity = 112/243 (46.09%), Postives = 157/243 (64.61%), Query Frame = 0
Query: 10 GQGTGVDAMLGMRTETNAGRRDGRAQGEMRAMTVSHGELSRADGSARIKLGGTDVIVAIYGPMDCPHNKQQVEALHVHVAYRRREAMGAALA-AANSATSNESVLTRDLQATVTDVVLTALHPRKAVVVAVQVLSDNGGVVAASINATSMALLDAGLPMRALPLAASVSIHNNALIVDPVLVEEREAHAVITITIDTALEKDDGFMSVYTIGDCGGEEIFAAAVAVCRQLVVKTRAFLRLGLE 251
G G+G DA LG+ T AGRRDGR G MR ++ + G+L R DGS+RI++G TDV+VA+YGPM+CP ++Q V+ VHV++R + A A + E+V RDL+ V V+ LHPRKA+ +AV VLSD+GG AA+INAT +AL+DAG+ +R++ AA V++HNNA+IVDP VEE EA AVIT+T +T + Y G G E + +AV R++ TR F+ L ++
Sbjct: 17 GGGSGSDAALGICTSQRAGRRDGRGAGTMREISATQGDLLRCDGSSRIRIGLTDVLVAVYGPMECPVHRQLVDRADVHVSFRHHASSSTMNAFATRKSLPGEAVAARDLREIVLQSVIVKLHPRKAIAIAVHVLSDDGGASAAAINATFLALVDAGVSLRSVLTAACVTVHNNAIIVDPEAVEEAEADAVITLTFETKKGTSANVVGSYCHGVLGSYENYQSAVQTARKISDGTREFMELAVK 259
BLAST of Gcaud1677.t1 vs. uniprot
Match: S2JKZ7_MUCC1 (Uncharacterized protein n=3 Tax=Mucor TaxID=4830 RepID=S2JKZ7_MUCC1) HSP 1 Score: 100 bits (250), Expect = 4.310e-22 Identity = 69/222 (31.08%), Postives = 116/222 (52.25%), Query Frame = 0
Query: 37 EMRAMTVSHGELSRADGSARIKLGGTDVIVAIYGPMDCPHNKQQVEALHVHVAYRRREAMGAALAAANSATSNESVLTRDLQATVTDVVLTALHPRKAVVVAVQVLSDNGGVVAASINATSMALLDAGLPMR--ALPLAASVSIHNNALIVDPVLVEEREAHAVITITIDTALEKDDGFMSVYTIGDCGG---EEIFAAAVAVCRQLVVKTRAFLRLGLEQK 253
++RA + S L+RADGS++ + G T VI ++ GPMD ++++ V V R + + AT+ E ++ L+ V+L + PR V + +Q+ D+G ++AAS+NA ++ALLDAG+PM+ A + A + N L++DP VE A +V T D K + + D G E+ + + +C + V K + FLR+ +E K
Sbjct: 13 QLRAFSASQNILNRADGSSKFEFGSTSVICSVSGPMDVQIRDEKLDEATVEVVVRPAKGV---------ATTREKLMESILRTAFEPVILGGMLPRTLVQIVIQITKDDGAILAASVNAITLALLDAGIPMKHMAAAITAMIDSKTNELVLDPTAVELENAKSVHTFAFDNVNTKP-----MVLLSDSEGLFSEDEYFSCHDLCFEAVEKVQGFLRVAVESK 220
BLAST of Gcaud1677.t1 vs. uniprot
Match: A0A7S1X548_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X548_9CHLO) HSP 1 Score: 98.6 bits (244), Expect = 3.960e-21 Identity = 74/226 (32.74%), Postives = 117/226 (51.77%), Query Frame = 0
Query: 21 MRTETNAGRRDGRAQGEMRAMTVSHGELSRADGSARIKLGGTDVIVAIYGPMDCPHNKQQVEALHVHVAYRRREAMGAALAAANSATSNESVLTRDLQATVTDVVLTALHPRKAVVVAVQVLSDNGGVVAASINATSMALLDAGLPMRALPLAASVSIHNNALI-VDPVLVEEREAHAVITITIDTAL--------EKDDGFMSVYTIGDCGGEEIFAAAVAVCRQ 237
M + A R DGR +R + L+RADGSA + GT+V+ A+YGP + P ++ E + V V +R R M + + E V+ R L+ + L +HPR V V +QV+SD+G +++A++NA AL+DAGLPM L + + ++ L+ VDP EE+EA AV+ + +D +KD ++ YT G +E + V R+
Sbjct: 1 MSADHYAERLDGRGGSTLRQFHLERACLNRADGSASWRQEGTEVLAAVYGPAEAPSRRENPECMVVEVLFRPRAGM-----VSRTDREYEHVVRRTLETAL----LRTVHPRTVVQVVLQVVSDDGSLLSAALNAACFALVDAGLPMSRLFSSVTCAVLPGPLVLVDPTREEEKEATAVVCLALDNCPRGAVSIEGDKDAKVITSYTAGTFS-QEAYLGVVLFSRE 216
BLAST of Gcaud1677.t1 vs. uniprot
Match: F2TXJ8_SALR5 (RNase_PH domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TXJ8_SALR5) HSP 1 Score: 97.4 bits (241), Expect = 6.730e-21 Identity = 73/224 (32.59%), Postives = 120/224 (53.57%), Query Frame = 0
Query: 31 DGRAQGEMRAMTVSHGELSRADGSARIKLGGTDVIVAIYGPMDCPHNKQQVEALHVHVAYRRREAMGAALAAANSATSNESVLTRDLQATVTDVVLTAL-----HPRKAVVVAVQVLSDNGGVVAASINATSMALLDAGLPMRALPLAASVSIHNNALIVDPVLVEEREAHAVITITIDTALEKDDG--FMSVYTIGDCGGEEIFAAAVAVCRQLVVKTRAFLR 247
DGR E+R M L + DGSA G + V+ A+YGP D P ++++ + V VA+ +SA NE LQ+ +T+ V+ AL PR A+ V +Q L+++GG++A +INAT +AL+DAG+ + A+ AAS ++ + LI+DP L+E+ +A+AV+ K + F+++++ G C +++ AV AFLR
Sbjct: 7 DGRKAMELRPMQCDLALLDKPDGSASFSFGDSSVMAAVYGPRDVPLSREKHDRSTVEVAW-------------HSAPDNEQGAA--LQSHLTEFVVNALASIHDFPRSAIRVVIQELNNDGGMLACAINATCLALMDAGISLTAMFAAASCAVVDGQLILDPTLIEQNKANAVVVTGACKQASKVNAAEFVALHSSGPCAPKQMVTVLEAV-ESATAAVAAFLR 214
BLAST of Gcaud1677.t1 vs. uniprot
Match: A0A2G4SM17_RHIZD (Ribosomal protein S5 domain 2-like protein n=4 Tax=Rhizopus TaxID=4842 RepID=A0A2G4SM17_RHIZD) HSP 1 Score: 97.4 bits (241), Expect = 7.850e-21 Identity = 67/221 (30.32%), Postives = 112/221 (50.68%), Query Frame = 0
Query: 37 EMRAMTVSHGELSRADGSARIKLGGTDVIVAIYGPMDCPHNKQQVEALHVHVAYRRREAMGAALAAANSATSNESVLTRDLQATVTDVVLTALHPRKAVVVAVQVLSDNGGVVAASINATSMALLDAGLPMRALPLAASVSIHN-NALIVDPVLVEEREAHAVITITIDTALEKDDGFMSVYTIGDCGG---EEIFAAAVAVCRQLVVKTRAFLRLGLEQK 253
++RA + + L RADGSAR LG T VI ++ GPM+ ++++ V V R + A++ E ++ L+ T ++L + PR V + VQ++ D+G V+AA++NA ++ALLDAG+P++ + + + I N +I+DP E A +V T D +S D G EE + +C Q V + +F+R +E K
Sbjct: 12 QLRAFSATQNVLHRADGSARFDLGATSVICSVSGPMEVQLRDEKLDEATVEVVVRPSSGI---------ASTKEKLIENTLRTTFEPIILGGMMPRTLVQIVVQIIKDDGSVIAAAVNAIALALLDAGIPLKYMAASVTCMIDKTNNIILDPTAAELENAKSVHTFAFDNTPRTTTVLLS-----DSSGVFSEEEYIECYDLCHQAVGQVHSFIRAAVEAK 218
BLAST of Gcaud1677.t1 vs. uniprot
Match: A0A024TBK6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TBK6_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.630e-20 Identity = 74/227 (32.60%), Postives = 121/227 (53.30%), Query Frame = 0
Query: 29 RRDGRAQGEMRAMTVSHGELSRADGSARIKLGGTDVIVAIYGPMDCPHNK-QQVEALHVHVAYRRREAMGAALAAANSATSNESVLTRDLQATVTDVVLTALHPRKAVVVAVQVLSDNGGVVAASINATSMALLDAGLPMRALPLAASVSIHNNA-LIVDPVLVEEREAHAVITITIDTALEKDDGFMSVYTIGDCGGEEIFAAAVAVCRQLVVKTRAFLRLGLEQK 253
R DGR E+R ++ G L+RADGSAR G T V+ ++ GP + ++V+A V V ++ + + T+ + L+ T +V +PR + + VQV+ D+G ++A +INA ++ALLDAG+PMR+L A + SI ++ L +DP L E A A +T K+DG ++ T G + FAA+ +CR+ + +F+R+ E K
Sbjct: 10 RDDGRLVQEIRPLSCEQGLLNRADGSARFCHGSTSVLASVNGPAAAKIRRHEKVDAATVEVVFKSDK---------GAPTARDKEYEAILKQTFDPIVYVENYPRAVISITVQVVEDDGSLLAVAINAVNLALLDAGIPMRSLVGAITCSILDDGQLCLDPSLTEGDAATASVTAAY---AGKNDGILTSITTGLVNESQYFAAS-EICRRAIDSVLSFVRIAQESK 223
BLAST of Gcaud1677.t1 vs. uniprot
Match: A0A835ZF16_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF16_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.220e-20 Identity = 78/249 (31.33%), Postives = 122/249 (49.00%), Query Frame = 0
Query: 31 DGRAQGEMRAMTVSHGELSRADGSARIKLGGTDVIVAIYGPMD-CPHNKQQVEALHVHVAYRRREAMGAALAAANSATSNESVLTRDLQATVTDVVLTALHPRKAVVVAVQVLSDNGGVVAASINATSMALLDAGLPMRALPLAASVSIHNNA-----------------LIVDPVLVEEREAHAVITITIDTALEKDDGFMSVYTIGDCGGEEIFAAAVAVCRQLVVKTRAFLRLGLEQKAAIRQIWN 261
DGR ++R + G L+RADGS R G T V+VA+YGP K++ + + V++R + A SA + + R T+ + V A +PR + V VQVL D+G V++A+INA +MAL+DAG+ M +P+AA+ + L +DP EE A + + + L DG +++ G G EE+FAA+ A R+ +LR +E K +R + N
Sbjct: 8 DGRTGDQIRGLFADQGILNRADGSVRFGAGNTSVLVAVYGPAQPAQQKKEKPDRAIIEVSWRADKG------AQTSADAERELYVRR---TLEEAVAVARYPRSVISVVVQVLCDDGSVLSAAINACAMALVDAGVEMIGMPVAATACFSGSGSAAAAAPEQLQHLGESHLQLDPSASEEATTRATVMLAV---LAGSDGILTMKMTGQLGAEELFAASEAA-RKACDAVSVYLRRAVEAKV-LRDVAN 242
BLAST of Gcaud1677.t1 vs. uniprot
Match: A0A6J3EMB3_AYTFU (exosome complex component RRP46 n=3 Tax=Anseriformes TaxID=8826 RepID=A0A6J3EMB3_AYTFU) HSP 1 Score: 95.9 bits (237), Expect = 2.350e-20 Identity = 70/200 (35.00%), Postives = 104/200 (52.00%), Query Frame = 0
Query: 38 MRAMTVSHGELSRADGSARIKLGGTDVIVAIYGPMDCPHNKQQVEALHVHVAYRRREAMGAALAAANSATSNESVLTRDLQATVTDVVLTALHPRKAVVVAVQVLSDNGGVVAASINATSMALLDAGLPMRALPLAASVSIH-NNALIVDPVLVEEREAHAVITITIDTALEKDDGFMSVYTIGDCGGEEIFAAAVAVCR 236
+R + G LSR DGSA G T V+ +YGP + +K+ E + V R + + S E +L + +A VVL ALHPR A+ + +QVLSD G +++ +NA M LLDAGLP+ AL + ++ A+++DP +E+EA AV+T ID+ +K + T G C EE+ VA R
Sbjct: 8 LRPFSCEQGLLSRPDGSAAFVQGDTSVLAGLYGPAEVRGSKESPERATLEVLLRPKVGLPGV-----GERSREQLLRQTCEA----VVLGALHPRTAITLVLQVLSDAGSLLSCCLNAACMGLLDAGLPLSALFCGVTCALDAQGAIVLDPTTRQEQEARAVLTFAIDSTEKK---VLMATTRGSCSVEEMQQCLVAAQR 195 The following BLAST results are available for this feature:
BLAST of Gcaud1677.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud1677.t1 ID=Gcaud1677.t1|Name=Gcaud1677.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=264bpback to top |