Gcaud1666.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1666.t1
Unique NameGcaud1666.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length363
Homology
BLAST of Gcaud1666.t1 vs. uniprot
Match: A0A2V3J008_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J008_9FLOR)

HSP 1 Score: 350 bits (897), Expect = 8.540e-110
Identity = 186/372 (50.00%), Postives = 254/372 (68.28%), Query Frame = 0
Query:    1 LHLISDTDALDVSKRAIRLILKRYGVELLPKSLSLHFYKQLIDKLAHASQYANVVFSLRGGCVSRLLAHAQIKQATSPGTT---QYIFPPDSYIGWRIQEVWHFPTPECSCKFFSPFLAVEEEITSIWYEAENPMQTSTLLSESRYANNVSSALRLFDKLSVHKNVSAQVSRWSA-SRNESDT-PRMMFASIACHSDPSSLTAQQRQSVRAQLRATSPTQTLLDVLEGLQSKPMQCLLDSPFLQRAELEKYV---QSGHRQPAFDMFTDPAFLEMARKWSPGFLPQPHPHAARRAESLYGAMYFNEAWPASTND--LGGSLVPLEHRKLVSKLATRVAALFTGCVSTPFRYLDVYPELAVIIASFVCSGMCV 362
            L L+SD DAL+VSKRAIRLIL+R GV+LLPK+LSL FYK LI+K+A A +YA+VV SLRGGCVSRLLAH QI   T+   +    Y+ PP  Y  WRIQE+WHFP+P+CSCKF S   AVEEE++S+W +  NP+  S   + +R A  V   L  FD+L+V KNVS  VSRW   S N+SD+ PR++FA +ACH+DPS LTA Q  ++RA LR  +P++ +L++L+  Q    +C LDS FL    +++ +    +   +P +D FT P  +EMARKWSP F+ Q  P +A+RA SLYGA+Y       + ++  +  + VP + R + S+L+T V  LFTGC ++ F YL  YPE+AVI++SFVC+G+CV
Sbjct:  516 LQLVSDADALEVSKRAIRLILRRLGVDLLPKTLSLPFYKSLIEKVAFAPRYAHVVVSLRGGCVSRLLAHVQITHVTNSELSLISDYVSPPQPYKDWRIQELWHFPSPQCSCKFSSAITAVEEEVSSVWSDMINPLPVSFNPNITRNATKV---LDSFDRLAVAKNVSEDVSRWETLSHNQSDSRPRILFADLACHADPSQLTAPQIAAIRAGLRRITPSEVILEMLDATQPTRKRCALDSQFLSLESMQQLLLPLSNSLEEPNWDAFTSPPLIEMARKWSPAFIVQREPRSAKRALSLYGAIYLYHQLRQNISEDTVNNTAVPNDARNMFSELSTTVEPLFTGCATSAFPYLHAYPEVAVIVSSFVCTGLCV 884          
BLAST of Gcaud1666.t1 vs. uniprot
Match: R7Q787_CHOCR (Glyco_transf_7C domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q787_CHOCR)

HSP 1 Score: 254 bits (650), Expect = 1.710e-75
Identity = 150/378 (39.68%), Postives = 216/378 (57.14%), Query Frame = 0
Query:    3 LISDTDALDVSKRAIRLILKRYGVELLPKSLSLHFYKQLIDKLAHASQYANVVFSLRGGCVSRLLAHAQIKQA-TSPGTTQ---------YIFPPDSYIGWRIQEVWHFPTPECSCKFFSPFLAVEEEITSIWYEAENPMQTSTLLSESRYANNVSSALRLFDKLSVHKNVSAQVSRW---SASRNESDTPRMMFASIACHSDPSSLTAQQRQSVRAQLRATSPTQTLLDVLEGLQSKPMQCLLDSPFLQRAELEKYVQSGHRQPAFDMFTDPAFLEMARKWSPGFLPQPHP--HAARRAESLYGAMYFNEAWPASTNDLGGSLVPLEHRKL---VSKLATRVAALFTGCVSTPFRYLDVYPELAVIIASFVCSGMCV 362
            L+SD DALDV+KRA+RLIL RYGV+ LPKSL+L FYK+LI K+A    YA VV + RGGC SRLLA+A   QA T    TQ         Y++PP  Y GWR+Q +W FP  ECSCKF S F A EEEI S W +  NP+Q S  +++ + + NV++ L+ FD+ +  K +S  + RW   S+   + D PR++   +AC  DP+ +   +RQ ++AQ R  +PT+ + + +      P+  +LD+P L +      V   +     DMFT P+   MA  W    LP   P      RA +L  A+Y  +   +S + L     P + ++L   V+ L+ R+  LF GC++    YL+ YPEL++I+A F+  G CV
Sbjct:  285 LVSDADALDVAKRAVRLILHRYGVQFLPKSLTLDFYKELITKVAFPEHYAEVVLTFRGGCASRLLAYATSNQAATGARLTQASAEIADSSYVWPPLPYRGWRLQGLWRFPDAECSCKFSSVFDAREEEIISTWSDKANPVQPSVSITDRQPSVNVTAILKGFDESATEKAISQDLLRWTKKSSRHGKHDQPRILMDDLACDVDPAHVPEHRRQLMQAQFRQLAPTKDIQETVSTSLRNPVPTILDTPLLAKENWSVLVGHKYATTVRDMFTKPSLQRMAAAWGATALPAGEPVHRLDDRAAALTIAVYVAQHGVSSPSHL----TPFQSQQLNQTVTTLSRRIERLFIGCLAQSSTYLEAYPELSLILAGFLSCGTCV 658          
The following BLAST results are available for this feature:
BLAST of Gcaud1666.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J008_9FLOR8.540e-11050.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q787_CHOCR1.710e-7539.68Glyco_transf_7C domain-containing protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_866_length_16874_cov_4.313174contigNODE_866_length_16874_cov_4.313174:6559..7647 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1666.t1Gcaud1666.t1Gracilaria caudata M_176_S67 malemRNANODE_866_length_16874_cov_4.313174 6559..7647 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1666.t1 ID=Gcaud1666.t1|Name=Gcaud1666.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=363bp
LHLISDTDALDVSKRAIRLILKRYGVELLPKSLSLHFYKQLIDKLAHASQ
YANVVFSLRGGCVSRLLAHAQIKQATSPGTTQYIFPPDSYIGWRIQEVWH
FPTPECSCKFFSPFLAVEEEITSIWYEAENPMQTSTLLSESRYANNVSSA
LRLFDKLSVHKNVSAQVSRWSASRNESDTPRMMFASIACHSDPSSLTAQQ
RQSVRAQLRATSPTQTLLDVLEGLQSKPMQCLLDSPFLQRAELEKYVQSG
HRQPAFDMFTDPAFLEMARKWSPGFLPQPHPHAARRAESLYGAMYFNEAW
PASTNDLGGSLVPLEHRKLVSKLATRVAALFTGCVSTPFRYLDVYPELAV
IIASFVCSGMCV*
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