Gcaud1655.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1655.t1
Unique NameGcaud1655.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length135
Homology
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BLAST of Gcaud1655.t1 vs. uniprot
Match: A0A2V3IXP0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXP0_9FLOR)

HSP 1 Score: 188 bits (477), Expect = 2.830e-59
Identity = 88/126 (69.84%), Postives = 100/126 (79.37%), Query Frame = 0 
Query:    3 SKITLAFVLVLAAIANAGDVVRQARLPGSCWQRSQQCCYEITECGWRCREGNGFKHCWKKYCNVPVCSEIKARTAVPNKPDDEIEWGTAIVTDCTEKPDECGSHQEGMDFDVESEAEEELPMPSGE 128
            SK+TLA  LVLA    AG V  Q   PG CWQRSQQCC++  ECGWRCREG+GFKHCW+KYCN  VCSEIKARTAVPNKPDD + WG +++ DCTEKPDECGSH  G+D++VE E  EELPMPSGE
Sbjct:    4 SKLTLA--LVLATALFAGFVSAQEETPGRCWQRSQQCCFQEVECGWRCREGSGFKHCWRKYCNKKVCSEIKARTAVPNKPDDSVGWGDSVMIDCTEKPDECGSHPPGIDYEVE-EPMEELPMPSGE 126
The following BLAST results are available for this feature:
BLAST of Gcaud1655.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IXP0_9FLOR2.830e-5969.84Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..134
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..134
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_34_length_72082_cov_4.421108contigNODE_34_length_72082_cov_4.421108:47350..47754 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1655.t1Gcaud1655.t1Gracilaria caudata M_176_S67 malemRNANODE_34_length_72082_cov_4.421108 47350..47754 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1655.t1 ID=Gcaud1655.t1|Name=Gcaud1655.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=135bp
MISKITLAFVLVLAAIANAGDVVRQARLPGSCWQRSQQCCYEITECGWRC
REGNGFKHCWKKYCNVPVCSEIKARTAVPNKPDDEIEWGTAIVTDCTEKP
DECGSHQEGMDFDVESEAEEELPMPSGEEEVGEM*
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