Gcaud1527.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1527.t1
Unique NameGcaud1527.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length386
Homology
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BLAST of Gcaud1527.t1 vs. uniprot
Match: A0A2V3ICV1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICV1_9FLOR)

HSP 1 Score: 407 bits (1045), Expect = 3.060e-138
Identity = 196/310 (63.23%), Postives = 241/310 (77.74%), Query Frame = 0 
Query:   76 IKQLDPKELKWSEIPFGSVQEELAAIDEYEREEGLEADALWPKFLRGAAYEHWGQPQLALAQYSKIPAGTQLYKVPQLWERKAYNSFKIGKVSEANAYFDVALTIYGQSVGNELHFAHWFQTNFQDYLPKWNGPNANVQRGICKYCVGVFKGTRESLVSQIALEGEHLEHAILWFLAASVKSVTDGIAPEWDLKMVRRALKADYGYDPRLRLFIDLYMAHATGMFGDVAQIEERLSNEIKNDDGDDIVSKVYIALYHDAFTKDQTECDRALDEVLALGGSRNQHDTENFFFFVAKNRFSSTASETSSSQK 385
            I++L P +L W+EIPF S+QEEL AIDEYEREE L+  + WPKFLRGAAYE+WGQP LALAQY+ I AGT L KVP+LWERKAYN FKIG V +A+A+FD+A+ +Y  SVGNELHF HWF  +F+DY+PKWNGP A VQRGICKYC+G+ K  RES V+QI ++ E +EHA+LWFLAAS KS TD    E DLK+V   +   + ++PRLRLFIDLY+A+A G+FG VA++EE LSN +K D  DDIV+KVYIALYHDAFTKD++E DRALDE+ A+G +  Q+DTENF F  A NRFS+   E S   K
Sbjct:   40 IEKLTPNKLTWAEIPFSSLQEELDAIDEYEREEDLDRGSSWPKFLRGAAYEYWGQPNLALAQYATIEAGTNLLKVPELWERKAYNCFKIGNVMQASAFFDIAINLYNLSVGNELHFVHWFYRHFKDYVPKWNGPPAPVQRGICKYCMGMSKIARESFVAQIVMKKEGMEHALLWFLAASYKSHTDEAVLECDLKIVHSTISEQFDWNPRLRLFIDLYLAYANGVFGRVAELEEELSNAVKKDGSDDIVTKVYIALYHDAFTKDESERDRALDELSAVGTTSKQNDTENFLFHTAVNRFSAPGKEKSDVSK 349
The following BLAST results are available for this feature:
BLAST of Gcaud1527.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ICV1_9FLOR3.060e-13863.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 99..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_332_length_29614_cov_4.285540contigNODE_332_length_29614_cov_4.285540:17845..19002 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1527.t1Gcaud1527.t1Gracilaria caudata M_176_S67 malemRNANODE_332_length_29614_cov_4.285540 17845..19002 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1527.t1 ID=Gcaud1527.t1|Name=Gcaud1527.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=386bp
MYNSTAFTSPIYSSASPLAATPLRSLGVCSWLSPLHKSSLKYARRRHGAV
VQLSVSDGVPADERQTEEERQHEELIKQLDPKELKWSEIPFGSVQEELAA
IDEYEREEGLEADALWPKFLRGAAYEHWGQPQLALAQYSKIPAGTQLYKV
PQLWERKAYNSFKIGKVSEANAYFDVALTIYGQSVGNELHFAHWFQTNFQ
DYLPKWNGPNANVQRGICKYCVGVFKGTRESLVSQIALEGEHLEHAILWF
LAASVKSVTDGIAPEWDLKMVRRALKADYGYDPRLRLFIDLYMAHATGMF
GDVAQIEERLSNEIKNDDGDDIVSKVYIALYHDAFTKDQTECDRALDEVL
ALGGSRNQHDTENFFFFVAKNRFSSTASETSSSQK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf