Gcaud1449.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1449.t1
Unique NameGcaud1449.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length222
Homology
BLAST of Gcaud1449.t1 vs. uniprot
Match: A0A2V3IH49_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH49_9FLOR)

HSP 1 Score: 186 bits (471), Expect = 8.170e-56
Identity = 97/203 (47.78%), Postives = 133/203 (65.52%), Query Frame = 0
Query:   13 AESLSSTDFRAMWNGASPTDDDFYRAAELIAMAHMRGQGTMFSRREHVPITHLDYFKPAPNAFVAELKQRDRRSAKEWEYYNAAGVWMELGISVIKDARRNAQLDHSGIVRLLRLAERSFEGALEIITMRGQYFRDLIEKGTEIARQTAFLVEQGHDTVFSENYRSAREALTSRLEIEAAKELAKLQLSQASNLSKQGSSSGS 215
            A S +    R MW  A PT  DF      +  A + G+G++F R  +VPITH+ +FKP  +AF  ELK +DRRS KEWEY N AGVW+E G++ +   +     D   I R L L E S + +LE++ MR QYFRD+ EKG E A+Q AF+VEQGHD V SE+YR+AREAL+++LE EAAK+LAK +L +A+  +++  + GS
Sbjct:    5 ANSSAPAALRGMWATAKPTGHDFAAVVNELNAAKLVGEGSVFQRGPYVPITHMAFFKPPMDAFTVELKTKDRRSVKEWEYINGAGVWLETGLAALMLCKEGTD-DLDTITRRLALVETSLKASLEVLLMRAQYFRDITEKGMEEAKQMAFVVEQGHDAVHSESYRTAREALSTKLEFEAAKQLAKNRLEKANKTAQKYKNGGS 206          
BLAST of Gcaud1449.t1 vs. uniprot
Match: A0A2V3J2L6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2L6_9FLOR)

HSP 1 Score: 109 bits (273), Expect = 5.270e-27
Identity = 64/140 (45.71%), Postives = 84/140 (60.00%), Query Frame = 0
Query:   65 LDYFKPAPNAFVAELKQRDRRSAKEWEYYNAAGVWMELGISVIKDARRNAQLDHSGIVRLLRLAERSFEGALEIITMRGQYFRDLIEKGTEIARQTAFLVEQGHDTVFSENYRSAREALTSRLEIEAAKELAKLQLSQAS 204
            + YFKP  +AF  ELK +DRRS+K+WEY +AAGVW ++    I +  R       G  RLL+LA ++F   LE                   ARQ AFL+EQG D VFSE+YR+   ALT+R+E EAAK+LAK Q+ +AS
Sbjct:    1 MGYFKPPTDAFFTELKNKDRRSSKKWEYISAAGVWTDVAAMAI-EIERTWDGGVEGTERLLKLARKAFRAVLED------------------ARQMAFLIEQGGDGVFSESYRTVHTALTARIEQEAAKQLAKAQIEKAS 121          
BLAST of Gcaud1449.t1 vs. uniprot
Match: A0A2V3IJ81_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ81_9FLOR)

HSP 1 Score: 98.2 bits (243), Expect = 8.830e-23
Identity = 53/99 (53.54%), Postives = 70/99 (70.71%), Query Frame = 0
Query:  117 DHSGIVRLLRLAERSFEGALEIITMRGQYFRDLIEKGTEIARQTAFLVEQGHDTVFSENYRSAREALTSRLEIEAAKELAKLQLSQASNLSKQGSSSGS 215
            D   I RLL L E S +  LE++ MR QYFRD+ E G E A+Q AFLVEQGHD V SE+YR+AREAL+++LE EAA +L K +L +A+  +++G   GS
Sbjct:    9 DLDTITRLLALVETSLKAYLELLLMRAQYFRDITEHGMEEAKQMAFLVEQGHDAVHSESYRTAREALSTKLEFEAATQLPKNRLEKANKTAQKGKKGGS 107          
BLAST of Gcaud1449.t1 vs. uniprot
Match: A0A2V3J4N7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4N7_9FLOR)

HSP 1 Score: 91.3 bits (225), Expect = 4.220e-20
Identity = 49/99 (49.49%), Postives = 68/99 (68.69%), Query Frame = 0
Query:  117 DHSGIVRLLRLAERSFEGALEIITMRGQYFRDLIEKGTEIARQTAFLVEQGHDTVFSENYRSAREALTSRLEIEAAKELAKLQLSQASNLSKQGSSSGS 215
            D   I R L L E S + +LE++ MR QYFRD+ E G E A+Q AFLVEQGH+ V SE+YR+AREAL+++LE EAA +L   +L +A+  +++    GS
Sbjct:    9 DLDTITRRLALVETSLKASLEVLLMRAQYFRDITENGMEEAKQMAFLVEQGHNAVHSESYRTAREALSTKLEFEAAMQLPNNRLGKANKTTQKDKKGGS 107          
BLAST of Gcaud1449.t1 vs. uniprot
Match: A0A2V3IF57_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF57_9FLOR)

HSP 1 Score: 65.5 bits (158), Expect = 1.260e-10
Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 0
Query:   22 RAMWNGASPTDDDFYRAAELIAMAHMRGQGTMFSRREHVPITHLDYFKPAPNAFVAELKQRDRRSAKEW 90
            RA W    P+  D+ +    +  + + G+G +F  R HV ITH+ YFKP  +AF+A LK +D RSAKEW
Sbjct:   14 RAAWATLKPSRHDYGKVVTELNASKLVGEGRVFESRPHVLITHMGYFKPETDAFLAGLKNKDPRSAKEW 82          
The following BLAST results are available for this feature:
BLAST of Gcaud1449.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IH49_9FLOR8.170e-5647.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J2L6_9FLOR5.270e-2745.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IJ81_9FLOR8.830e-2353.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4N7_9FLOR4.220e-2049.49Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IF57_9FLOR1.260e-1043.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1021_length_14946_cov_4.146752contigNODE_1021_length_14946_cov_4.146752:13318..13983 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1449.t1Gcaud1449.t1Gracilaria caudata M_176_S67 malemRNANODE_1021_length_14946_cov_4.146752 13318..13983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1449.t1 ID=Gcaud1449.t1|Name=Gcaud1449.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=222bp
MSGPPQSAAPTGAESLSSTDFRAMWNGASPTDDDFYRAAELIAMAHMRGQ
GTMFSRREHVPITHLDYFKPAPNAFVAELKQRDRRSAKEWEYYNAAGVWM
ELGISVIKDARRNAQLDHSGIVRLLRLAERSFEGALEIITMRGQYFRDLI
EKGTEIARQTAFLVEQGHDTVFSENYRSAREALTSRLEIEAAKELAKLQL
SQASNLSKQGSSSGSGGSSKK*
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