Gcaud1444.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1444.t1
Unique NameGcaud1444.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length274
Homology
BLAST of Gcaud1444.t1 vs. uniprot
Match: A0A2V3IGL0_9FLOR (Putative phycocyanin operon protein Z n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGL0_9FLOR)

HSP 1 Score: 274 bits (700), Expect = 6.340e-89
Identity = 152/272 (55.88%), Postives = 192/272 (70.59%), Query Frame = 0
Query:    1 MAKVPLFI-PALPVRSRAFPARATAPLRRRAPPLCSAVPPPPAPDVENLFSRLKHVNKNLRKKASAELADIATEPIIARLVSLLDVEDVSHRRTAVQALAMTGTPALPPVLAQLKSTENPTVRASCSKVIAGVALFFPDLRENFSTDALDALQSALQTADPVTKLATVGCLGTLGSDQKQRDQLIARGSQRALQILLSVCTPEADIAVAAAAVGALAQIAQNGSPEQKEAIISHLQSLTDSSGFDDQSGANYVQEIAISHLEQLEGAPIASN 271
            MA   LF+ P  PV   A P R++   R R     S   PPP    ++LFSRL HVN NLRKKAS +L++ AT  II RL+S L VEDV+HRR AVQAL+MTG PAL PVL QL +T+N TVRASC+KV++G+AL+FPD R+ F   A ++LQ+ALQ  DPVTKLAT+GCL T+GSD K+  Q+ A G+  A+QIL S+CT  +D+ VAA A GALAQIAQNG+PE K+ +I H QSLT S   DD+ G NYV+E+  SHLEQL+   + S+
Sbjct:    1 MAPPALFVTPVTPVAPVALPRRSSHAARNR-----SVRRPPPTCTADDLFSRLSHVNPNLRKKASYQLSERATPQIITRLISELSVEDVAHRRAAVQALSMTGLPALQPVLHQLDTTDNVTVRASCAKVLSGIALYFPDARQTFPQAAFNSLQTALQHGDPVTKLATIGCLATMGSDFKEGGQVTANGNASAVQILFSLCTASSDMVVAATAAGALAQIAQNGTPETKQHVIDHFQSLTASPEADDEPGFNYVREMVSSHLEQLKSKSVVSD 267          
BLAST of Gcaud1444.t1 vs. uniprot
Match: A0A1X6PEY8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEY8_PORUM)

HSP 1 Score: 159 bits (403), Expect = 7.330e-44
Identity = 100/228 (43.86%), Postives = 143/228 (62.72%), Query Frame = 0
Query:   41 PAP-DVENLFSRLKHVNKNLRKKASAELADIATEPIIARLVSLLDVEDVSHRRTAVQALAMTGTPALPPVLAQLKSTENPTVRASCSKVIAGVALFFPDLRENFSTDALDALQSALQTA-DPVTKLATVGCLGTLGSDQK---QRDQLIARGSQRALQILLSVCTPEADIAVAAAAVGALAQIAQNGSPEQKEAIISHLQSLTDSSGFDDQSGANYVQEIAISHLEQL 263
            PAP D++  F RL H N+ +RK+AS  +AD  T   I RL++LL ++DV+HRR AVQ+L M G  A+P +  QL ++ + TVRAS  K +A VAL+FP  R  F T A+D +++AL  A DPVTKLATVG LGTLGS  K      +    G+ RA+  L+ +     D+ VAA AVGALA I  +G   +++A++  LQ+L +  G D   G+ +++E+A +H   L
Sbjct:   61 PAPIDMDAAFVRLGHKNEVMRKRASLAIADNRTPDTIDRLIALLPLDDVAHRRAAVQSLGMIGMDAVPALSHQLATSTDATVRASAVKGLAAVALYFPAERATFPTVAMDTMEAALTGAPDPVTKLATVGALGTLGSPTKGGADDGEAALPGNARAVAFLIRIADETEDLGVAAVAVGALASIGASG---ERDAVLPALQALAEKQGGD---GSEFIREMAGTHASNL 282          
BLAST of Gcaud1444.t1 vs. uniprot
Match: A0A7S1TN48_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TN48_9RHOD)

HSP 1 Score: 132 bits (332), Expect = 4.950e-33
Identity = 82/220 (37.27%), Postives = 123/220 (55.91%), Query Frame = 0
Query:   44 DVENLFSRLKHVNKNLRKKASAELADIATEPIIARLVSLLDVEDVSHRRTAVQALAMTGTPALPPVLAQLKSTENPTVRASCSKVIAGVALFFPDLRENFSTDALDALQSALQTADPVTKLATVGCLGTLGSDQKQRDQLIARGSQRALQILLSVCTPEADIAVAAAAVGALAQIAQNGSPEQKEAIISHLQSLTDSSGFDDQSGANYVQEIAISHLEQL 263
            +V  LF RL H  K  R++A   LA       I+RLV +L + D   RR AVQ L + G PA+ PV  +L +TE+ TVRASC K +A + L +P+LR +F   A+D L S ++++D VTKLATV CLG LGS    RD     G++ A+ +LLS      D+ +  + V +L  +   GS    E ++  ++    S    D  G +Y+ ++A + +E+L
Sbjct:  104 EVNKLFDRLSHPAKTQRQRAGLLLAANLRSDTISRLVDMLVLTDTVPRRQAVQTLGVIGVPAIEPVCKELTTTEDVTVRASCIKTLAAIILNYPELRIDFPKSAMDTLASVIESSDQVTKLATVMCLGALGSRDITRD---IPGNREAVSLLLSTLETSEDVGLMTSVVMSLGNV---GSCGDAEMVLDGIKRAIASK--KDLEGGDYIVQVAEAQIERL 315          
BLAST of Gcaud1444.t1 vs. uniprot
Match: A0A5J4YIQ2_PORPP (Putative phycocyanin operon protein Z n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YIQ2_PORPP)

HSP 1 Score: 125 bits (315), Expect = 1.220e-30
Identity = 80/228 (35.09%), Postives = 125/228 (54.82%), Query Frame = 0
Query:   44 DVENLFSRLKHVNKNLRKKASAELADIATEPIIARLVSLLDVEDVSHRRTAVQALAMTGTPALPPVLAQLKSTENPTVRASCSKVIAGVALFFPDLRENFSTDALDALQSALQTADPVTKLATVGCLGTLGSDQKQRDQLIARGSQRALQILLSVCTPEADIAVAAAAVGALAQIAQNGSPEQKEAIISHLQSLTDSSGFDDQSGANYVQEIAISHLEQLEGAPIASN 271
            D + +F+RL H  +  R+ A+  LA       + RL+ +L +ED   RR AVQ L   G P +  V  +L ST++ TVRASC K +A + L +P+LR  F   ALD L+S +  +D VTKLATV CLG LGS    RD     GS  A+ +LL + +   D+ + A+ V +L  I   G  ++   ++  L+   +S    D  G +Y+ ++A + +E+L  + +A +
Sbjct:   95 DWDKMFARLGHEARTQRQIATMTLAANMRPDTVPRLIEMLRLEDTVPRRQAVQTLGAIGKPCVDAVCDELISTQDVTVRASCVKSLAALILNYPELRLEFPQRALDTLKSVVHESDQVTKLATVMCLGVLGSRDVTRD---IPGSPAAIDLLLDILSVTQDVGLGASVVMSLGSIGTCGDADR---VLDGLRGAVES--MKDIEGGDYIAQLAEAQIEKLSSSSLADS 314          
BLAST of Gcaud1444.t1 vs. uniprot
Match: A0A1Z4RVU3_9CHRO (HEAT repeat-containing PBS lyase n=1 Tax=Chondrocystis sp. NIES-4102 TaxID=2005460 RepID=A0A1Z4RVU3_9CHRO)

HSP 1 Score: 117 bits (293), Expect = 1.320e-28
Identity = 79/220 (35.91%), Postives = 118/220 (53.64%), Query Frame = 0
Query:   45 VENLFSRLKHVNKNLRKKASAELADIATEPIIARLVSLLDVEDVSHRRTAVQALAMTGTPALPPVLAQLKSTENPTVRASCSKVIAGVALFFPDLRENFSTDALDALQSALQTADPVTKLATVGCLGTLGSDQKQRDQLIARGSQRALQILLSVCTPEADIAVAAAAVGALAQIAQNGSPEQKEAIISHLQSLTDSSGFDDQSGANYVQEIAISHLEQLE 264
            ++ LF +LKH N NLR KA  EL +I  E  I RL+S+LD EDV++RR AV+AL + GT  + PV+  L +++NPTVR+SC+KV+A +A+ +PD+       A++ L  AL   +PV  +  V  LG +GS                  IL+       ++AV  A + AL  +   G P   E +++ L +        D S   Y++E A S L +LE
Sbjct:    3 IDALFEKLKHPNHNLRSKAMHELVEIRDENTIPRLMSVLDQEDVTYRRAAVKALGLIGTDVVTPVVDSLINSDNPTVRSSCAKVLAQIAVNYPDVE--MPQVAIEGLTQALNDPNPVVNIPAVMTLGEIGSP--------------VFNILVETLNTTDNLAVGVAILNALGSM---GDPRGVE-VLTKLSN--------DSSADTYIRESATSALSRLE 194          
BLAST of Gcaud1444.t1 vs. uniprot
Match: UPI001B242C16 (HEAT repeat domain-containing protein n=1 Tax=Cyanobacteria bacterium SBLK TaxID=2821505 RepID=UPI001B242C16)

HSP 1 Score: 116 bits (291), Expect = 2.740e-28
Identity = 81/217 (37.33%), Postives = 124/217 (57.14%), Query Frame = 0
Query:   48 LFSRLKHVNKNLRKKASAELADIATEPIIARLVSLLDVEDVSHRRTAVQALAMTGTPALPPVLAQLKSTENPTVRASCSKVIAGVALFFPDLRENFSTDALDALQSALQTADPVTKLATVGCLGTLGSDQKQRDQLIARGSQRALQILLSVCTPEADIAVAAAAVGALAQIAQNGSPEQKEAIISHLQSLTDSSGFDDQSGANYVQEIAISHLEQLE 264
            LF +LKH N NLR +A  E+AD   E  I  L+ LL+ ED+++RR+AV+ L + G  A+P ++ +LK++EN T+RASC+K +A VA+  PD  + F    L AL++AL   +PV  +A+   LG +GS               AL IL+       ++AVA A V A+  I     PE+K       ++LT+ +  +D+S  +YV+E A S L +L+
Sbjct:    6 LFEQLKHPNHNLRSRAMREIADTRDENTIPHLMGLLEEEDMTYRRSAVKTLGVIGLDAVPSLVDELKNSENATIRASCTKALAQVAVNHPD--DPFPELGLQALKTALGDLNPVVHIASAMALGAVGS--------------AALDILVEAVQTTENVAVAVAVVNAIGSI-----PEEKAT-----KTLTELA--NDESIDSYVRESANSALSRLQ 194          
BLAST of Gcaud1444.t1 vs. uniprot
Match: UPI001C0364C1 (HEAT repeat domain-containing protein n=1 Tax=Leptothoe spongobia TaxID=2651728 RepID=UPI001C0364C1)

HSP 1 Score: 114 bits (284), Expect = 2.950e-27
Identity = 73/220 (33.18%), Postives = 119/220 (54.09%), Query Frame = 0
Query:   45 VENLFSRLKHVNKNLRKKASAELADIATEPIIARLVSLLDVEDVSHRRTAVQALAMTGTPALPPVLAQLKSTENPTVRASCSKVIAGVALFFPDLRENFSTDALDALQSALQTADPVTKLATVGCLGTLGSDQKQRDQLIARGSQRALQILLSVCTPEADIAVAAAAVGALAQIAQNGSPEQKEAIISHLQSLTDSSGFDDQSGANYVQEIAISHLEQLE 264
            +++ F +LKH N N+R++A  ++ D   E  I RL+S LD ED  +RR AV+ L   G  A+P ++  L S+EN TVR SC+K +A VAL++PD  E F    L  L+ +L   +PV  +A+   LG +G+               AL ILL       ++A++ + V ALA +  + + E    ++++L         +D++   YV+E A+S L ++E
Sbjct:    1 MDSFFEQLKHPNPNIRERAMVDIIDNRDETTIPRLMSALDAEDTVYRRAAVKTLGAVGVDAVPAIVEALGSSENVTVRGSCAKALAQVALYYPD--EPFPEIGLQGLKRSLNDPNPVVHIASAMALGEIGN--------------AALDILLETLQTTDNLALSVSIVNALASVGGDQAVE----VLTNLA--------EDETADGYVKETAVSALSRME 192          
BLAST of Gcaud1444.t1 vs. uniprot
Match: A0A6M0SK90_9CYAN (HEAT repeat domain-containing protein n=2 Tax=unclassified Leptolyngbyaceae TaxID=1892297 RepID=A0A6M0SK90_9CYAN)

HSP 1 Score: 113 bits (282), Expect = 5.660e-27
Identity = 78/229 (34.06%), Postives = 117/229 (51.09%), Query Frame = 0
Query:   45 VENLFSRLKHVNKNLRKKASAELADIATEPIIARLVSLLDVEDVSHRRTAVQALAMTGTPALPPVLAQLKSTENPTVRASCSKVIAGVALFFPDLRENFSTDALDALQSALQTADPVTKLATVGCLGTLGSDQKQRDQLIARGSQRALQILLSVCTPEADIAVAAAAVGALAQIAQNGSPEQKEAIISHLQSLTDSSGFDDQSGANYVQEIAISHLEQLEGAPIASNPK 273
            ++  F +LKH N N+R +A  ++ D   E  I RL+S LD ED ++RR AV+ L   G  A+P ++  L ++EN TVR SC+K +A VAL +PD  E F    L  L+ +L   +PV  +A+   LG +G+               AL ILL       ++A++ + V ALA +      +Q   +++ L         DD S   YV+E AIS L ++E     S PK
Sbjct:    1 MDAFFEQLKHPNPNMRNRAMVDIIDNRDETTIPRLMSALDAEDTTYRRAAVKTLGAVGLDAVPAIVEALANSENVTVRGSCAKALAQVALNYPD--EPFPELGLQGLKQSLNDPNPVVHIASAMALGEIGN--------------AALDILLESLQTTDNLALSVSIVNALASV----GGDQASEVLAKLA--------DDDSVNGYVKETAISALSRMEMVQNFSRPK 201          
BLAST of Gcaud1444.t1 vs. uniprot
Match: E0U6T4_GLOV7 (PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Gloeothece verrucosa (strain PCC 7822) TaxID=497965 RepID=E0U6T4_GLOV7)

HSP 1 Score: 110 bits (276), Expect = 4.220e-26
Identity = 79/220 (35.91%), Postives = 122/220 (55.45%), Query Frame = 0
Query:   45 VENLFSRLKHVNKNLRKKASAELADIATEPIIARLVSLLDVEDVSHRRTAVQALAMTGTPALPPVLAQLKSTENPTVRASCSKVIAGVALFFPDLRENFSTDALDALQSALQTADPVTKLATVGCLGTLGSDQKQRDQLIARGSQRALQILLSVCTPEADIAVAAAAVGALAQIAQNGSPEQKEAIISHLQSLTDSSGFDDQSGANYVQEIAISHLEQLE 264
            +++LF +LKH N NLR++A  ELA+   E  I RL+S+LD EDVS+RR+AV+AL   GT ++PP++  L  ++N  +R+SC+K +A VA   P+  + F    +  L++AL   +PV  +A+   LG +G                AL IL+       + A+A A V AL  I     P+++  I+  L S+      +D+S   YV+E A S L +LE
Sbjct:    3 LDSLFQQLKHPNPNLRERAMYELAEQREEQTIPRLISILDSEDVSYRRSAVKALGFIGTDSVPPLVELLLHSDNAIIRSSCAKALAQVAYNHPE--DPFPEAGMLGLKAALNDPNPVVHIASAMALGEIGGP--------------ALDILIEGLKTTDNEALAIALVNALGSI-----PDER--IVEVLTSVA-----NDESADAYVRESATSALSRLE 194          
BLAST of Gcaud1444.t1 vs. uniprot
Match: A0A1Z4NGU9_9CYAN (HEAT repeat-containing PBS lyase n=1 Tax=Calothrix sp. NIES-3974 TaxID=2005462 RepID=A0A1Z4NGU9_9CYAN)

HSP 1 Score: 110 bits (276), Expect = 4.330e-26
Identity = 62/131 (47.33%), Postives = 85/131 (64.89%), Query Frame = 0
Query:   45 VENLFSRLKHVNKNLRKKASAELADIATEPIIARLVSLLDVEDVSHRRTAVQALAMTGTPALPPVLAQLKSTENPTVRASCSKVIAGVALFFPDLRENFSTDALDALQSALQTADPVTKLATVGCLGTLGS 175
            ++ LF +LKH N NLR +A  E+A    E  I RL+S+LD EDV +RR AVQAL + GT ++PP+   L  ++NPTVRASC+KV+A VA+  PD   +F +  + ALQ A    +PV  +A V  LG +GS
Sbjct:    1 MDALFEQLKHPNPNLRDRAMLEIAAQRDENTIPRLISILDDEDVVYRRAAVQALGVIGTDSIPPLENLLLHSDNPTVRASCAKVMAQVAVNHPDA--SFPSTGITALQQATNDPNPVVHIAAVMALGEIGS 129          
The following BLAST results are available for this feature:
BLAST of Gcaud1444.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGL0_9FLOR6.340e-8955.88Putative phycocyanin operon protein Z n=1 Tax=Grac... [more]
A0A1X6PEY8_PORUM7.330e-4443.86Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TN48_9RHOD4.950e-3337.27Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A5J4YIQ2_PORPP1.220e-3035.09Putative phycocyanin operon protein Z n=1 Tax=Porp... [more]
A0A1Z4RVU3_9CHRO1.320e-2835.91HEAT repeat-containing PBS lyase n=1 Tax=Chondrocy... [more]
UPI001B242C162.740e-2837.33HEAT repeat domain-containing protein n=1 Tax=Cyan... [more]
UPI001C0364C12.950e-2733.18HEAT repeat domain-containing protein n=1 Tax=Lept... [more]
A0A6M0SK90_9CYAN5.660e-2734.06HEAT repeat domain-containing protein n=2 Tax=uncl... [more]
E0U6T4_GLOV74.220e-2635.91PBS lyase HEAT domain protein repeat-containing pr... [more]
A0A1Z4NGU9_9CYAN4.330e-2647.33HEAT repeat-containing PBS lyase n=1 Tax=Calothrix... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13646HEAT_2coord: 46..127
e-value: 2.2E-9
score: 37.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..273
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..15
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 41..265
e-value: 1.8E-23
score: 85.1
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 44..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1021_length_14946_cov_4.146752contigNODE_1021_length_14946_cov_4.146752:3477..4298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1444.t1Gcaud1444.t1Gracilaria caudata M_176_S67 malemRNANODE_1021_length_14946_cov_4.146752 3477..4298 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1444.t1 ID=Gcaud1444.t1|Name=Gcaud1444.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=274bp
MAKVPLFIPALPVRSRAFPARATAPLRRRAPPLCSAVPPPPAPDVENLFS
RLKHVNKNLRKKASAELADIATEPIIARLVSLLDVEDVSHRRTAVQALAM
TGTPALPPVLAQLKSTENPTVRASCSKVIAGVALFFPDLRENFSTDALDA
LQSALQTADPVTKLATVGCLGTLGSDQKQRDQLIARGSQRALQILLSVCT
PEADIAVAAAAVGALAQIAQNGSPEQKEAIISHLQSLTDSSGFDDQSGAN
YVQEIAISHLEQLEGAPIASNPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold