Gcaud1329.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1329.t1
Unique NameGcaud1329.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length163
Homology
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BLAST of Gcaud1329.t1 vs. uniprot
Match: A0A2V3J529_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J529_9FLOR)

HSP 1 Score: 223 bits (569), Expect = 3.480e-68
Identity = 117/162 (72.22%), Postives = 135/162 (83.33%), Query Frame = 0 
Query:    1 MKLWEDHDLDDPYEPIFITKDDRFDSKARRSFIFEETPPYASRVDHHKLFGLPGKGYPPFYFDGPDISVGDGDPDIEISVQRIQKPMGEHSEVTSSSLDDAPRPPETEESNYKTAVMAASNFNNSLRNGRNDLRRWLVEDLAVDEESEXXXXXXXXXQDSSE 162
            MKLWEDHD DDPY+PIFITKD+RFD+KARRSFIFE+TPPYASRVDH  LFG+P K YP +YFDGPDISVG GDPD+E+SV+R+QKP+GEHSE TSSSLDD  +   + ES Y +AV+AAS +N SLR+ R  LRRWLVEDLA +E   XXXXXXX  QDSSE
Sbjct:  334 MKLWEDHDPDDPYQPIFITKDERFDTKARRSFIFEDTPPYASRVDHRNLFGVPSKDYPLYYFDGPDISVGGGDPDLEVSVKRLQKPVGEHSEETSSSLDDVIKRDASSESGYASAVVAASEYNKSLRDERIHLRRWLVEDLAAEEXXXXXXXXXXGDQDSSE 495
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BLAST of Gcaud1329.t1 vs. uniprot
Match: R7Q737_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q737_CHOCR)

HSP 1 Score: 139 bits (350), Expect = 4.180e-36
Identity = 66/141 (46.81%), Postives = 95/141 (67.38%), Query Frame = 0 
Query:    1 MKLWEDHDLDDPYEPIFITKDDRFDSKARRSFIFEETPPYASRVDHHKLFGLPGKGYPPFYFDGPDISVGDGDPDIEISVQRIQKPMGEHSEVTSSSLDDAPRPPETEESNYKTAVMAASNFNNSLRNGRNDLRRWLVEDL 141
            ++LWED DLDDPYEPIF+T+DD FD KAR+S++ E+  PYA + ++  LFG+P   YP ++F GP +S  DG+PDIE+ V R Q+   E SEV+ +S +            Y +AV+ A+ +N+ LR  R +LR+WLVED+
Sbjct:  312 LRLWEDRDLDDPYEPIFVTEDDEFDRKARKSWLVEDKAPYAEQFEYQNLFGVPSSDYPMYFFKGPSLSNVDGEPDIEVVVHRKQQVKVETSEVSGASEEINSHARIGGSDTYSSAVLEAAQYNSILRRDRTELRKWLVEDV 452
The following BLAST results are available for this feature:
BLAST of Gcaud1329.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J529_9FLOR3.480e-6872.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q737_CHOCR4.180e-3646.81Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3078_length_4083_cov_4.731463contigNODE_3078_length_4083_cov_4.731463:102..590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1329.t1Gcaud1329.t1Gracilaria caudata M_176_S67 malemRNANODE_3078_length_4083_cov_4.731463 102..590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1329.t1 ID=Gcaud1329.t1|Name=Gcaud1329.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=163bp
MKLWEDHDLDDPYEPIFITKDDRFDSKARRSFIFEETPPYASRVDHHKLF
GLPGKGYPPFYFDGPDISVGDGDPDIEISVQRIQKPMGEHSEVTSSSLDD
APRPPETEESNYKTAVMAASNFNNSLRNGRNDLRRWLVEDLAVDEESEDE
DDEEDGDQDSSE*
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