Gcaud1245.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1245.t1
Unique NameGcaud1245.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length631
Homology
BLAST of Gcaud1245.t1 vs. uniprot
Match: A0A2V3J3A2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3A2_9FLOR)

HSP 1 Score: 160 bits (404), Expect = 2.880e-38
Identity = 136/431 (31.55%), Postives = 219/431 (50.81%), Query Frame = 0
Query:  178 MMNDLGLFYHNGNDNLRKAPKRASKWYKRAIKTYKYPSAMYNLAMLLLEED-PGAGDVQRAIQLLEDAMEREQQQDELTILKLADVYLEH-EIN-AERAIQLYETAVLRFNSSKGRSNLLGLWTKGTELKGDVGLLDASHIYNFCWRDTMRNSHRGSFVT--TAQMLWTGVDHVEANQKKAMELLASKNWVTHDCFYLMLRHDLSTHPGGTKAARRLMKKINDNIDKCDIGNINSIVISE-SDGYDDKLLALESFRAQTTMRSS-LHEIVWLAPYLRMGRHNLPFHGHPDCVTNPLRMFTLWVSVASLNLASLLLEIEGKQQEAMAIL---EDLMETNVRLIARLNLAYVLIKGI-TPDSNRTRGMELLADAVKETNDVSARAMLADALSERPDSDADDVERGWKLWRSVEEDEKDEDELRKIRRLISVRS 597
            +M  LG  Y  G   L ++     KWY+RAI   KY  A Y LA  L   +        RA QL E+A++  Q   E   L LAD+Y+++ E+   ER I LYE    ++NS K +  L+ +   G     D+ + D   +     +    +S R   +T   A +LW+G   ++  +K A+++  +  W       LMLR+     P    AA++  +++ +   K      +S+ ISE SD   D   A+    +  T+ S  +    WL  YLRM +   P+HGH  C T  ++ F     +  LN+ASLLLE     + +  I+   EDLM T +  +A LNL+YVL KG+     ++ R + LL   V+E ND+SAR +L   L+E  +++ ++++R   LWR+VEE+  +++EL+K+ RL+S ++
Sbjct:  176 LMTKLGHLYSTGTALLPRSYDDMIKWYQRAIDDGKYSPAKYYLACALTSTEWDQPRKPFRASQLFEEALD--QNPCEGYALALADLYVDYLELQKTERGILLYEATAKKYNSRKAKCALIYILAHGLF---DIPI-DCKRVLTIL-KPYRSSSARCRLITETVASVLWSGAIGIKPRRKFAVDIARTTRWPNDYTLSLMLRYGAPGLPVNRHAAKKRYRQVKN---KAAYDIAHSLFISEPSDPEYDPGRAIRIIPSIVTLDSEYVTAFGWLPLYLRMSKIRFPYHGHEQCFTYSVKRFAGLHDILILNMASLLLEEPSSSETSNTIICMFEDLMGTELHDVATLNLSYVLWKGVGVVPQDKARAIGLLEGLVEERNDISARVLLTSILAE--ETNENNIQRCLSLWRTVEEETDEDEELKKLSRLLSAKA 594          
BLAST of Gcaud1245.t1 vs. uniprot
Match: A0A2V3ITQ7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITQ7_9FLOR)

HSP 1 Score: 152 bits (384), Expect = 1.010e-35
Identity = 134/439 (30.52%), Postives = 221/439 (50.34%), Query Frame = 0
Query:  180 NDLGLFYHNGNDNLRKAPKRASKWYKRAIKTYKYPSAMYNLAMLLLE-EDPGAGDVQRAIQLLEDAMEREQQQDELTILKLADVYLE--HEINAERAIQLYETAVLRFNSSKGRSNLLGLWTKGTELKGD----VGLLDASHIYNFCWRDTMRNSHRGSFVTTAQMLWTGVDHVEANQKKAMEL---LASKNWVTHDCFYLMLRHDLSTHPGGTKAARRLMKKINDNIDKCDIGNINSIVISESDGYDDKLL--ALESFRAQTTMRSSLHEIVWLAPYLRMGRHNLPFHGHPDCVTNPLRMFTLWVSVASLNLASLLLEIEGK----QQEAMAILEDLMETNVRLIARLNLAYVL---IKGITPDSNRTRGMELLADAVKETNDVSARAMLADALSERPDSDADDVERGWKLWRSVEEDEKDEDELRKIRRLISVRSTE 599
            N LG+ + +G  +     +RA KW+ RAI+    PSA +NLA++L +  D    D  RA  LLE+ +E   +Q    IL+LA++Y      +N  RA+ L   AV  FNS   R +L  +   G  +       +GL +         R   +    GS +  ++MLW+G + + A+ ++++ L   L  K  + +     MLR+   T P   K A  + ++   + D   I  +++I++SE    +D  +  A+E FRA +         VWL   LR    +LP HG+  C+T  ++ +     +A LNLASLL+E         +EA+ +LE L++T +  +A LNL Y+L   + GI  D  R R   L   A +E N++  + +LA+ALSE  D +  D ++  +LWRSVE+  K   E+ ++  ++S ++ E
Sbjct:  148 NALGVVFADGAPHFPPNARRAVKWFNRAIEVGNLPSAKHNLAVILTQTHDKVMPDPSRAALLLEEVVEETGKQG--AILQLAELYSNWLSVLNYPRAVTLLTRAVHEFNSYPARFSLARMLAFGEGVPAQRATALGLFE---------RHYEKVHDIGSMLNLSEMLWSGTEELPADMERSVSLCKQLCRKTDIGNYVLASMLRYGAPTLPRNLKQAITICEREKADDDHF-IMLVHAILLSEDPESNDSDISHAIELFRALSVDTPLQMWWVWLPLSLRTSSVDLPIHGNEHCITESVKRYEEVNVIAKLNLASLLVEDRSPTLQDSEEAVQLLESLIDTRIGDLAALNLGYLLWNEVGGIPQDKERARA--LFERATEEDNNLVGKVLLANALSEGIDEEVSDADQVAELWRSVEDANKTNAEVSRLSSMLSDQAKE 572          
BLAST of Gcaud1245.t1 vs. uniprot
Match: A0A2V3IUV8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUV8_9FLOR)

HSP 1 Score: 91.7 bits (226), Expect = 1.290e-15
Identity = 105/414 (25.36%), Postives = 174/414 (42.03%), Query Frame = 0
Query:  177 DMMNDLGLFYHNGNDNLRKAPKRASKWYKRAIKTYKYPSAMYNLAMLLLEEDPGAGDVQRAIQLLEDAMEREQQQDELTILKLADVYLEHEINAERAIQLYETAVLRFNSSKGRSNLLGLWTKGT-----ELKGDVGLLDASHIYNFCWRDTMRNSHRGSFVTTAQMLWTGVDHVEANQKKAMELLASKNWVTHDCFYLMLRHDLSTHPGGTKAARRLMKKINDNIDKCDIGNINSIVISESDGYD----DKLLALESFRAQTTMRSSLHEIVWLAPYLRMGRHNLPFHGHPDCVTNPLRMFTLWVSVASLNLASLLLEIEG----KQQEAMAILEDLMETNVRLIARLNLAYVLIKGITPDSNRT-RGMELLADAVKETNDVSARAMLADALSERPDSDADDVERGWKLWRSV 576
            + MN LGL+Y +G   +R   +RA KW++RAI+   +  A YNLA++L+  +P   D  R+++LL++ +     +D +  L      ++   N   A  LY+ AV  ++S++    L+     G+     ++     LL+    Y    +DT                                ++   +  T           L        A  +   K   + DK     + +++ISE   +D    D   A +   A+    +  H  +W+  YLR+    LP HG P+ +T   +       VA +NLA L LE  G    +   A+ +L  L+ T V  +A +NL +VL  GI      T R +EL  +A  +T    A A LA A++   D  A D+ R  ++WR V
Sbjct:  179 EKMNILGLYYADGVLRIRPNKRRAIKWFERAIQCADHAYAKYNLAVMLVLRNPP--DPLRSVRLLKEVILTNGDKDAVLFLASVLCAVKQVENYALAHALYDFAVRVYDSTEAMMKLVDYLMIGSPALAVDIPRAFRLLERH--YEIA-KDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYRVIKGDSEFTATLLRFGAPQVLVPDRPRALALMQAHSKAEPDDDKL----LLAVLISEQGYHDLEQVDYEQAAQLLEAECESVARKHTFLWMPFYLRVSTIPLPVHGDPNSLTLCTKREECIPHVAQINLAGLYLEGRGLAPDEADRAVNLLTSLLNTRVADLAAMNLGFVLWNGIAGVKKDTVRALELFDEAFGQTGSALAGAYLAGAMATGSDEVAPDLVRAARIWRRV 583          
The following BLAST results are available for this feature:
BLAST of Gcaud1245.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J3A2_9FLOR2.880e-3831.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITQ7_9FLOR1.010e-3530.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUV8_9FLOR1.290e-1525.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 231..251
NoneNo IPR availablePANTHERPTHR43628:SF1ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 11..316
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 11..316
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..465
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 486..630
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 466..485
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 21..190
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 156..283
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 508..543
e-value: 270.0
score: 1.2
coord: 98..133
e-value: 28.0
score: 9.8
coord: 214..249
e-value: 14.0
score: 12.4
coord: 176..212
e-value: 6.5
score: 15.3
coord: 25..60
e-value: 230.0
score: 1.9
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 62..92
e-value: 100.0
score: 3.8
coord: 214..242
e-value: 0.3
score: 11.8
coord: 336..357
e-value: 130.0
score: 3.5
coord: 102..130
e-value: 0.021
score: 15.5
coord: 177..208
e-value: 0.013
score: 16.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 2..365
e-value: 3.8E-31
score: 110.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_627_length_20665_cov_4.535384contigNODE_627_length_20665_cov_4.535384:11037..12929 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1245.t1Gcaud1245.t1Gracilaria caudata M_176_S67 malemRNANODE_627_length_20665_cov_4.535384 11037..12929 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1245.t1 ID=Gcaud1245.t1|Name=Gcaud1245.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=631bp
MAANHEDPVEQARALEILVQRDNDINAMIRLGCLLLYNDKLLSQRARGVQ
MLERVIKQSHNGLAMYCLACFLWKCDDRTDQRRAFLLFERSLKEKEQPDV
LIRLSHCYLFGRGVAKDANLAVQMAERAFKHTKNADVMGNLAWTLIQAPD
YRTERKRAVALYKKAIHLSSSAEAMADMMNDLGLFYHNGNDNLRKAPKRA
SKWYKRAIKTYKYPSAMYNLAMLLLEEDPGAGDVQRAIQLLEDAMEREQQ
QDELTILKLADVYLEHEINAERAIQLYETAVLRFNSSKGRSNLLGLWTKG
TELKGDVGLLDASHIYNFCWRDTMRNSHRGSFVTTAQMLWTGVDHVEANQ
KKAMELLASKNWVTHDCFYLMLRHDLSTHPGGTKAARRLMKKINDNIDKC
DIGNINSIVISESDGYDDKLLALESFRAQTTMRSSLHEIVWLAPYLRMGR
HNLPFHGHPDCVTNPLRMFTLWVSVASLNLASLLLEIEGKQQEAMAILED
LMETNVRLIARLNLAYVLIKGITPDSNRTRGMELLADAVKETNDVSARAM
LADALSERPDSDADDVERGWKLWRSVEEDEKDEDELRKIRRLISVRSTEK
WKTLACQQQEHTTVKSSVTARDDDSLSCST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf