Gcaud1221.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1221.t1
Unique NameGcaud1221.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length673
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud1221.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 567..588
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 633..672
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 609..632
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 589..608
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..566
NoneNo IPR availableTMHMMTMhelixcoord: 567..589
NoneNo IPR availableTMHMMTMhelixcoord: 610..632

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1493_length_10227_cov_4.697415contigNODE_1493_length_10227_cov_4.697415:244..5136 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1221.t1Gcaud1221.t1Gracilaria caudata M_176_S67 malemRNANODE_1493_length_10227_cov_4.697415 244..5136 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1221.t1 ID=Gcaud1221.t1|Name=Gcaud1221.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=673bp
MAHLGVVAFFIQFCLVAVRSSPMNSGVIGDEEALAFSSSLISSGNLHDGS
ATRGIGGVWDEEAAGGSSRLGTIAVRVGGFGGSRPADDFSEVENESFLYQ
DQGQYDSIEGSPQPDPETHILMDLACSGDVCSSDDQSQIVCDISYLRHHD
LMDEDVSLSTVDGGIGTIPADEGVLIILDTPPSHVRLTTALNDDHAVLCG
RKEPSLSDSLFIGTASGAIMHPELPETVASDENGTGYVSPLGFYRTGGSR
GADELSGHEVLFEYDERTRNAFNPANIQNGIYSVVVNDANGSAYQPVRIV
DQLIGNMSESSDVRLSPASTGWRFFRIALGGHYDEIQVRSTSLELSYIYT
NSTHLMPTSTAQFRRGNDFAGAGAMDLVNDYDIWEFPVRLITRKTGNGTF
DFPPPYEDISDASTLANNTYGHVTGDCSLDSDFQQFNLGRFTTAKRADCM
GVAGSLADDSRCWQANHDCRLESCEENCCISETPYNRNATCMWVQINPRE
LAANRTNRIRFPEDIDSDETSSPINRNAEVETMNQLHRKSDAVESLLSEV
VVNAEPSIPARPSAIDLALVCATVLSAMLAVDSARIYSFGSSIMRKLGRK
RSSSIWAKACAVLSVTAISTLAAFIPVAIIIYQEVSVGMLNIERFGNAWH
AQLYGMQLKIANALWTHIWGRG*
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