Gcaud1218.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1218.t1
Unique NameGcaud1218.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length575
Homology
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BLAST of Gcaud1218.t1 vs. uniprot
Match: A0A2V3IZV7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZV7_9FLOR)

HSP 1 Score: 383 bits (983), Expect = 4.660e-123
Identity = 235/558 (42.11%), Postives = 323/558 (57.89%), Query Frame = 0 
Query:    1 MIVLGVVSYLFRSLRPLWRVLGGVGPFFLALDADAGDLYFVYYIKTGLVLLMDALLLYQFFDTNGFEEDTPSSHAIFAVISILFIASCVITFVGHRLRDRIVVTRSTPAFTCNELVPVDPCVFGTPYADFEEKTIRTPLKPVDLRDAWEDDGHGGRRPLTPKEVHTGVLRTCFITQYVMSRIYKSPKNHIYVFSMVAWYRTRVFLLLAALTGLCDVGNDLFRTDGTTKDVASKAILWLTLPSITIPALLKIRFGTHARLNFLMCGLLPVTCDREMWLRIGVGPSDLYCALTNAVPAERVLDSTIGLINGAGKSNVKVCSPKLARRASIDSLLRVSDYYVRVFDGRLFQMFRPDTLKVVRGERYTVRDRNNVGGFDKGSARRYSHAEYDAENPEGDSDWWGE-WETWGGVLQVAKQSWD--DEDRNFDALTDRSDCSAQKPRLQQSCISRCAGV-EKYRELLLRLLASAFGDGDISSVEEYERLKNKV--ETGVRCNGNDEHLLLCVIAGAFVQGKLQTSQFRGLQAFLQRRSKTVWIPFKRRGSRSDLLLSERKSDAV 552
            +++L V+   F  LRPLWR++  +GP  LALD DAG+    Y  K  + L+   L L   ++T+GFE+ TP   A+  V+ +LFIASC  T   +R R  + V ++    TCN L P+D C+   PYAD+   TIRTPL P +LR AW  D   GRR L+  EV   VL  CF+TQ+VM RI+KSP+N +YVFS+VAWYR RV LLLAA+ G  DV + LFR      DV SKAILWLTLPSIT+PA+L+I FG  A L  +  G LPV+ DRE+WLR+GV P DLY ALTN V A RVL  T+GLINGAG  NVKV +   A RAS +SL+R+ D +VRVFDG  F+  +  +L+++      +    N    D  ++      + D E  E     W   WET GGVL+ ++  W+  + D+  +   +R     Q  R  +    R  G+ +  R+ L RL+A AF   +I   +EYERL   V  ++G R   +D   L  ++AGAF +G +   ++R +   L+RR    +I F+  G++      E  +D V
Sbjct:   17 LLLLAVLPSFFHVLRPLWRIVAALGPLILALDIDAGNHSGFYSAKFTISLIFALLSLPLVYETSGFEQITPFFRAVVPVLLLLFIASCATTMAANRRRSCVWVGKTKQIHTCNNLFPIDKCLNAKPYADYPSLTIRTPLTPAELRGAWVRDSECGRRMLSVNEVRARVLYICFVTQFVMQRIFKSPQNQVYVFSLVAWYRMRVLLLLAAIAGFIDVFDGLFRGSYADSDVMSKAILWLTLPSITVPAILRIYFGNKASLKLMFYGFLPVSSDRELWLRLGVQPRDLYTALTNGVRAGRVLKETVGLINGAGVGNVKVENLPDAVRASEESLIRLGDLFVRVFDGMRFEK-QGGSLRILSARYELIHQNCN----DSAASDSIQSNDVDEEEKELVGTGWDRGWETDGGVLEASEAEWEGSEGDKRVEGEGER-----QWWRWWKKLWRRRDGMTQDVRKQLRRLIADAFSKEEIEE-DEYERLTESVTVDSGRR---SDVERLSQIVAGAFWRGHIDWVEYRLVSQPLERRLAMRFI-FRASGAKGTAKGIEGTADDV 559
The following BLAST results are available for this feature:
BLAST of Gcaud1218.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZV7_9FLOR4.660e-12342.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 546..574
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 211..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..189
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 190..210
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 250..574
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..33
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 230..249
NoneNo IPR availableTMHMMTMhelixcoord: 190..212
NoneNo IPR availableTMHMMTMhelixcoord: 75..97
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
NoneNo IPR availableTMHMMTMhelixcoord: 15..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_547_length_22469_cov_5.357315contigNODE_547_length_22469_cov_5.357315:12435..14159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1218.t1Gcaud1218.t1Gracilaria caudata M_176_S67 malemRNANODE_547_length_22469_cov_5.357315 12435..14159 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1218.t1 ID=Gcaud1218.t1|Name=Gcaud1218.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=575bp
MIVLGVVSYLFRSLRPLWRVLGGVGPFFLALDADAGDLYFVYYIKTGLVL
LMDALLLYQFFDTNGFEEDTPSSHAIFAVISILFIASCVITFVGHRLRDR
IVVTRSTPAFTCNELVPVDPCVFGTPYADFEEKTIRTPLKPVDLRDAWED
DGHGGRRPLTPKEVHTGVLRTCFITQYVMSRIYKSPKNHIYVFSMVAWYR
TRVFLLLAALTGLCDVGNDLFRTDGTTKDVASKAILWLTLPSITIPALLK
IRFGTHARLNFLMCGLLPVTCDREMWLRIGVGPSDLYCALTNAVPAERVL
DSTIGLINGAGKSNVKVCSPKLARRASIDSLLRVSDYYVRVFDGRLFQMF
RPDTLKVVRGERYTVRDRNNVGGFDKGSARRYSHAEYDAENPEGDSDWWG
EWETWGGVLQVAKQSWDDEDRNFDALTDRSDCSAQKPRLQQSCISRCAGV
EKYRELLLRLLASAFGDGDISSVEEYERLKNKVETGVRCNGNDEHLLLCV
IAGAFVQGKLQTSQFRGLQAFLQRRSKTVWIPFKRRGSRSDLLLSERKSD
AVHSPDDVEVNTDNPSSETRSEDI*
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