Gcaud1073.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud1073.t2
Unique Name	Gcaud1073.t2
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	242

Homology

The following BLAST results are available for this feature:

BLAST of Gcaud1073.t2 vs. uniprot

BLAST of Gcaud1073.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..70
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 71..91
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 92..241
None	No IPR available	TMHMM	TMhelix		coord: 71..93

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_966_length_15672_cov_4.486041	contig	NODE_966_length_15672_cov_4.486041:12013..12738 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud1073.t2	Gcaud1073.t2	Gracilaria caudata M_176_S67 male	mRNA	NODE_966_length_15672_cov_4.486041 12013..12738 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud1073.t2 ID=Gcaud1073.t2|Name=Gcaud1073.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=242bp
MPLHARREGCYQRCNAHLKAHLRYHGKHTIDLDTSANEPRPLNVDIYKTA
DCALSLINEPYSMFLDTKSQVFVVLTLIMEICVIGDLAYFVRGKYLDDQL
QNMVKRQHAHNWTSLKGRSALVHRRVIDRLQLWDWKPGNFEHFTADGALN
KETQSQLFYVLLEKSRLLHRRPVTVGNNLAMRIVKALKACELDGLEFECF
LYKQVDQWLASWGCDPTELRRAQKPVLPWPSPVVESSLPLG*