Gcaud1073.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1073.t1
Unique NameGcaud1073.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length447
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud1073.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 108..275
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 297..446
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 276..296
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 81..85
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..107
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 276..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_966_length_15672_cov_4.486041contigNODE_966_length_15672_cov_4.486041:12013..13353 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1073.t1Gcaud1073.t1Gracilaria caudata M_176_S67 malemRNANODE_966_length_15672_cov_4.486041 12013..13353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1073.t1 ID=Gcaud1073.t1|Name=Gcaud1073.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=447bp
MAPIVHQSSDAAPSGFGTSLELALITASIALTVLIQLMRARLPGRLFSTR
RFWRKNSLLLVLYLIIALVSIASLTLGWLRRISLEALVAISFTLASTLAH
IGSRVFVIHRALRFYWGAYKMDYGVHADTIWDANEFCYVRVESPCRFVIR
GAVRPGSKCLGDACNARIYCVYLSDKPLFSPLSALLSTLRRRLRYDGDTT
EPKVYMPLHARREGCYQRCNAHLKAHLRYHGKHTIDLDTSANEPRPLNVD
IYKTADCALSLINEPYSMFLDTKSQVFVVLTLIMEICVIGDLAYFVRGKY
LDDQLQNMVKRQHAHNWTSLKGRSALVHRRVIDRLQLWDWKPGNFEHFTA
DGALNKETQSQLFYVLLEKSRLLHRRPVTVGNNLAMRIVKALKACELDGL
EFECFLYKQVDQWLASWGCDPTELRRAQKPVLPWPSPVVESSLPLG*
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