Gcaud10197.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud10197.t1
Unique NameGcaud10197.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length852
Homology
BLAST of Gcaud10197.t1 vs. uniprot
Match: A0A2V3II65_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II65_9FLOR)

HSP 1 Score: 659 bits (1700), Expect = 6.780e-222
Identity = 413/859 (48.08%), Postives = 560/859 (65.19%), Query Frame = 0
Query:    1 MRLLREQRTQLRNAVDSLTHQLAAKERQLADLRRQTEALPPDMARAQHQLEYMRTKVVTLERHNSDLLCRTDYDMAAAYHARKELAVQHNAFANHITTLKLDLDQIYAERDRLSERVQQLEQRLLDSDVDRCMLSLVSXXXXXXXXXXXXASSGDMSSIAAENARLKMQTELTHTKRRMETITKKLLEALHHKQQLALEVQSRLHNEASMLQMFGDLKKETQRLRDERDLAAQNAQQMEQTVGDMKEKADKYEAVCEQRDQSIQRADQLQTAYTELANILGCS-SVPTEQMDTEQLSSIVNNARFRLQRSEIERQSTAELAAMRETELDRLEKLLRKERDARANAERRIERIASKHVALAAAIGHRECPVDAESGLADIFPHVRRLSEVTRSQQETILNLRQQLADRELAVETSAMEVEKLKHVRRRIKTEANDLENTVHTLEAEVASLSKENSAMKGALQSMEQESQQHAGLSEVLRLEKERNAANVRGHGMELAHLRSEIAQKQVEIEKSASEIEHVHKLVADLQAACEGLQAEKNGLEHEISRKIEENDVMTGELDDAVTKIEQLRSDCAELQAELGEQDRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRTYIEAAENFEMQTAALTKRLNASQREKQEFKNIVAAMSSRSGEDGETRLLKAARRCEKLERENESLRKRMG------RGDXXXXXTGHEDGGSVKSDASSFTSVLTATSAGSDD-TGFDR-VQQLQGLLEEETRVKEDKSKRLQEAELSLKEMVAEMEKMKGLAKEKEREAEGLRSEMKSIHSRMRKMAHVSMPRDYEKWLEEDDEDMERLQQVREATRKERDADRRSKGRRKSKGLTMENKG 850
            +R LR QR +LRN V +LTH+LAA E +      +  +LP  ++ A HQ+ ++R++V  LERHN  LL RTD+ ++  YHAR + A+ +  F + +  L  DL  +  ERD L +R+  LE RL+DSD DRCML +VS              +          +  K+ +EL + KR +ET+TKKLLEA H   QL L+ ++++ NE SM QMFGDLKKE +RL+ ERD AA+  QQ+   +  ++    ++ A  +Q   + QRA  L+ AY+ LA  +G     P ++  T QL+S V     R Q+S  + ++    A M ++ +D+L   L KER A A AE RI+ IA KHV LA AIGHRECP+D ++GLA+I+PH RRL+E+T SQQ TILNLR+ L   E   ET++M+VEKLK +RR +K +A  LE+ VH+LEAEVA+LS+ENSAMK +LQ  E++S Q  G+SEVLRLEKERNA NVR HG+E+AHLR+++A++   +EKS +E + +H++V+DLQ  C  LQ EK  L+ + S   ++N  M  E+     ++  +R +   LQ EL EQ ++V                            R+TYIEAA NFE Q AAL K+L  SQREK++  +++ AMS  S E+G+ RL +A +RCE+LE+EN+ LR  +G      R       T  ED  S +SD+ S TS LT +SAGS++  G  R VQQLQ  L+EETRV+EDK+KRL+EAE  L++M  +MEK+K +AK+KEREA+GLR+EMKSIHSRMRKMAHVSMPRDYEKWLE DDED+ERLQQVREATRKER+ DRRSKGRRKSKG+  ENKG
Sbjct:   77 LRTLRAQRAELRNTVQTLTHKLAAMECERNAATNRVASLPSSLSDATHQISWLRSRVAALERHNEHLLQRTDHQVSVVYHARSQAALHNATFTDTMYALHTDLADLRHERDHLLDRLHSLEHRLVDSDADRCMLYVVSVERDRLEERLQHIHN-------VHKSHAKVHSELANNKRLLETVTKKLLEACHRNNQLRLDNEAKIQNEHSMRQMFGDLKKECERLQLERDQAAELEQQLTAQLAALR----RHFADFDQLQLAAQRAHTLEHAYSSLARAVGQHVHSPVDETATVQLNSFVQQIVARYQQSATDLEALQADADMHQSRIDQLNDALEKERHATAQAELRIDVIAEKHVQLATAIGHRECPLDPQTGLANIYPHARRLAELTESQQSTILNLRENLVKCEAEAETTSMQVEKLKRLRRTMKADAEQLESRVHSLEAEVAALSRENSAMKNSLQYFEEQSHQRQGISEVLRLEKERNATNVRDHGVEMAHLRAQLAERDALVEKSVAETKRLHEIVSDLQTTCTTLQGEKLELDGQASENSDKNQRMEAEMTKLSAELHHIRDERDSLQNELREQGQLVSAEREELAVQLAERTANFAELEAELNDARKTYIEAANNFEAQRAALEKQLGVSQREKEQVNDLLVAMSG-SNEEGDKRLEQAMKRCEQLEQENDGLRLSVGESRQVNRNVHLRSMTREEDSSSFRSDSCSVTSSLTTSSAGSEEGLGLSRRVQQLQSRLDEETRVREDKAKRLREAEQRLRDMRGDMEKLKNVAKDKEREADGLRNEMKSIHSRMRKMAHVSMPRDYEKWLEGDDEDLERLQQVREATRKEREVDRRSKGRRKSKGVMFENKG 923          
The following BLAST results are available for this feature:
BLAST of Gcaud10197.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3II65_9FLOR6.780e-22248.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 221..255
NoneNo IPR availableCOILSCoilCoilcoord: 134..154
NoneNo IPR availableCOILSCoilCoilcoord: 1..35
NoneNo IPR availableCOILSCoilCoilcoord: 417..465
NoneNo IPR availableCOILSCoilCoilcoord: 96..130
NoneNo IPR availableCOILSCoilCoilcoord: 736..791
NoneNo IPR availableCOILSCoilCoilcoord: 808..828
NoneNo IPR availableCOILSCoilCoilcoord: 320..354
NoneNo IPR availableCOILSCoilCoilcoord: 557..641
NoneNo IPR availableCOILSCoilCoilcoord: 664..684
NoneNo IPR availableCOILSCoilCoilcoord: 494..549
NoneNo IPR availableGENE3D1.20.5.400coord: 386..471
e-value: 4.6E-5
score: 26.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 676..700
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 676..708
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 813..851
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 766..851
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 766..806

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1478_length_10346_cov_3.733886contigNODE_1478_length_10346_cov_3.733886:1988..4543 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud10197.t1Gcaud10197.t1Gracilaria caudata M_176_S67 malemRNANODE_1478_length_10346_cov_3.733886 1988..4543 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud10197.t1 ID=Gcaud10197.t1|Name=Gcaud10197.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=852bp
MRLLREQRTQLRNAVDSLTHQLAAKERQLADLRRQTEALPPDMARAQHQL
EYMRTKVVTLERHNSDLLCRTDYDMAAAYHARKELAVQHNAFANHITTLK
LDLDQIYAERDRLSERVQQLEQRLLDSDVDRCMLSLVSAERDQLEERLQQ
ASSGDMSSIAAENARLKMQTELTHTKRRMETITKKLLEALHHKQQLALEV
QSRLHNEASMLQMFGDLKKETQRLRDERDLAAQNAQQMEQTVGDMKEKAD
KYEAVCEQRDQSIQRADQLQTAYTELANILGCSSVPTEQMDTEQLSSIVN
NARFRLQRSEIERQSTAELAAMRETELDRLEKLLRKERDARANAERRIER
IASKHVALAAAIGHRECPVDAESGLADIFPHVRRLSEVTRSQQETILNLR
QQLADRELAVETSAMEVEKLKHVRRRIKTEANDLENTVHTLEAEVASLSK
ENSAMKGALQSMEQESQQHAGLSEVLRLEKERNAANVRGHGMELAHLRSE
IAQKQVEIEKSASEIEHVHKLVADLQAACEGLQAEKNGLEHEISRKIEEN
DVMTGELDDAVTKIEQLRSDCAELQAELGEQDRIVSQEREELAEQLAERT
ENFAKVEAELNDARRTYIEAAENFEMQTAALTKRLNASQREKQEFKNIVA
AMSSRSGEDGETRLLKAARRCEKLERENESLRKRMGRGDGRGRGTGHEDG
GSVKSDASSFTSVLTATSAGSDDTGFDRVQQLQGLLEEETRVKEDKSKRL
QEAELSLKEMVAEMEKMKGLAKEKEREAEGLRSEMKSIHSRMRKMAHVSM
PRDYEKWLEEDDEDMERLQQVREATRKERDADRRSKGRRKSKGLTMENKG
G*
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