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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud10197.t1.start1 | Gcaud10197.t1.start1 | Gracilaria caudata M_176_S67 male | start_codon | NODE_1478_length_10346_cov_3.733886 1988..1990 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud10197.t1.exon1 | Gcaud10197.t1.exon1 | Gracilaria caudata M_176_S67 male | exon | NODE_1478_length_10346_cov_3.733886 1988..4543 + |
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud10197.t1.stop1 | Gcaud10197.t1.stop1 | Gracilaria caudata M_176_S67 male | stop_codon | NODE_1478_length_10346_cov_3.733886 4541..4543 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gcaud10197.t1 ID=Gcaud10197.t1|Name=Gcaud10197.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=852bp MRLLREQRTQLRNAVDSLTHQLAAKERQLADLRRQTEALPPDMARAQHQL EYMRTKVVTLERHNSDLLCRTDYDMAAAYHARKELAVQHNAFANHITTLK LDLDQIYAERDRLSERVQQLEQRLLDSDVDRCMLSLVSAERDQLEERLQQ ASSGDMSSIAAENARLKMQTELTHTKRRMETITKKLLEALHHKQQLALEV QSRLHNEASMLQMFGDLKKETQRLRDERDLAAQNAQQMEQTVGDMKEKAD KYEAVCEQRDQSIQRADQLQTAYTELANILGCSSVPTEQMDTEQLSSIVN NARFRLQRSEIERQSTAELAAMRETELDRLEKLLRKERDARANAERRIER IASKHVALAAAIGHRECPVDAESGLADIFPHVRRLSEVTRSQQETILNLR QQLADRELAVETSAMEVEKLKHVRRRIKTEANDLENTVHTLEAEVASLSK ENSAMKGALQSMEQESQQHAGLSEVLRLEKERNAANVRGHGMELAHLRSE IAQKQVEIEKSASEIEHVHKLVADLQAACEGLQAEKNGLEHEISRKIEEN DVMTGELDDAVTKIEQLRSDCAELQAELGEQDRIVSQEREELAEQLAERT ENFAKVEAELNDARRTYIEAAENFEMQTAALTKRLNASQREKQEFKNIVA AMSSRSGEDGETRLLKAARRCEKLERENESLRKRMGRGDGRGRGTGHEDG GSVKSDASSFTSVLTATSAGSDDTGFDRVQQLQGLLEEETRVKEDKSKRL QEAELSLKEMVAEMEKMKGLAKEKEREAEGLRSEMKSIHSRMRKMAHVSM PRDYEKWLEEDDEDMERLQQVREATRKERDADRRSKGRRKSKGLTMENKG G* back to topspliced messenger RNA >Gcaud10197.t1 ID=Gcaud10197.t1|Name=Gcaud10197.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2556bp|location=Sequence derived from alignment at NODE_1478_length_10346_cov_3.733886:1988..4543+ (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.
ATGCGTCTTTTGCGCGAACAACGCACGCAGCTTCGAAACGCCGTCGATTC TCTCACTCATCAACTTGCCGCCAAGGAGCGTCAGCTTGCCGACCTGCGTC GCCAAACTGAAGCGCTGCCGCCGGACATGGCGCGTGCGCAGCACCAATTG GAGTACATGCGCACCAAAGTCGTGACGTTGGAGCGACACAATTCCGACTT GCTTTGTCGCACCGATTATGATATGGCCGCTGCCTATCACGCCAGAAAGG AATTGGCTGTGCAGCATAATGCATTTGCCAATCATATCACTACCCTGAAG CTTGACCTTGACCAAATATACGCCGAGCGAGATCGTTTGTCCGAGCGCGT GCAGCAGCTTGAGCAGCGTTTACTAGACTCTGACGTGGACAGATGCATGC TATCTCTCGTTTCTGCGGAGCGCGACCAATTGGAAGAGCGTTTGCAGCAA GCCTCATCCGGCGACATGTCATCCATCGCCGCCGAGAACGCGCGCCTCAA GATGCAAACCGAACTCACGCATACAAAACGCCGCATGGAAACCATCACAA AGAAACTGCTCGAGGCGTTGCATCACAAGCAACAACTTGCTCTCGAAGTG CAGAGCAGGCTGCATAACGAAGCCAGTATGCTGCAAATGTTTGGCGACCT CAAGAAAGAAACCCAACGTCTGCGAGATGAACGTGATCTGGCCGCACAAA ACGCGCAACAAATGGAACAAACCGTGGGTGATATGAAGGAGAAGGCCGAT AAGTATGAAGCTGTATGTGAGCAAAGAGACCAGTCCATTCAACGTGCAGA CCAACTTCAGACCGCTTACACTGAATTGGCCAATATTCTTGGTTGTTCAT CTGTCCCGACCGAGCAGATGGATACTGAACAACTCAGTTCCATTGTGAAC AACGCTCGATTCCGCCTGCAGCGCAGTGAGATTGAACGGCAGTCAACCGC CGAACTTGCCGCCATGCGCGAAACAGAGCTCGATCGCTTGGAGAAACTTC TGCGAAAGGAACGTGATGCGAGAGCTAATGCGGAACGCCGCATCGAACGT ATTGCTTCCAAACATGTGGCGCTAGCGGCGGCAATCGGGCATCGAGAGTG CCCAGTGGATGCTGAAAGTGGTCTTGCTGACATCTTTCCACACGTGCGCC GTTTGTCCGAGGTGACGAGATCGCAGCAGGAAACCATTCTCAACTTGAGG CAACAGTTGGCCGATCGTGAGCTTGCCGTGGAGACCAGTGCTATGGAGGT GGAGAAACTGAAGCACGTTCGCCGCAGAATCAAGACAGAGGCCAACGATC TTGAGAACACGGTGCACACCCTGGAGGCGGAGGTTGCGTCGCTCTCCAAG GAGAACAGTGCCATGAAGGGCGCACTGCAGAGCATGGAGCAAGAAAGCCA GCAACATGCGGGACTTTCTGAGGTGCTCCGCCTCGAGAAGGAGCGCAATG CGGCGAACGTGAGAGGTCATGGCATGGAGTTGGCCCATCTGCGCTCTGAG ATTGCACAGAAGCAGGTGGAGATTGAGAAGAGCGCCAGTGAAATCGAACA CGTGCACAAACTGGTGGCAGATTTGCAAGCTGCGTGTGAGGGGTTGCAGG CTGAGAAGAATGGGTTGGAACATGAGATTTCTAGGAAGATTGAGGAGAAC GACGTTATGACGGGGGAATTAGACGATGCTGTGACGAAAATCGAACAGCT TCGCTCGGACTGCGCGGAGTTACAGGCAGAACTGGGCGAACAGGATCGCA TTGTGTCGCAGGAACGCGAGGAACTTGCAGAGCAACTGGCGGAACGGACG GAGAACTTTGCAAAGGTGGAGGCGGAATTGAATGACGCGCGAAGGACGTA TATCGAAGCGGCGGAGAACTTTGAGATGCAAACGGCGGCTTTGACGAAAC GTCTGAACGCATCGCAGCGAGAGAAACAGGAGTTCAAGAACATTGTGGCG GCGATGAGCTCACGCTCGGGAGAGGATGGGGAGACACGATTGCTCAAGGC TGCACGCAGGTGTGAGAAACTGGAACGAGAAAACGAGAGTTTGCGAAAGC GGATGGGACGTGGCGATGGTAGGGGCAGGGGGACGGGTCATGAGGATGGA GGCTCTGTGAAGTCGGATGCCAGTTCGTTTACTAGTGTGCTTACTGCGAC TTCTGCGGGCAGCGATGACACAGGGTTTGATCGTGTGCAGCAGCTGCAGG GGTTGCTGGAAGAGGAGACGAGAGTGAAAGAGGACAAGTCGAAGCGTCTG CAGGAGGCGGAACTGAGCTTgaaggaaatggtggcggagatggagaagat gaagggactggcgaaggagaaggagCGCGAGGCCGAAGGTCTAAGGAGTG AAATGAAGAGCATTCACTCGCGAATGAGGAAGATGGCGCATGTTTCGATG CCGAGGGACTACGAGAAATGGCTTGAGGAGGATGATGAGGATATGGAACG TTTGCAACAGGTGAGAGAGGCGACGAGGAAGGAACGGGATGCGGATCGAA GGTCGAAGGGACGAAGAAAATCGAAGGGTTTGACGATGGAGAACAAGGGG GGATAA back to topprotein sequence of Gcaud10197.t1 >Gcaud10197.t1 ID=Gcaud10197.t1|Name=Gcaud10197.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=852bp
MRLLREQRTQLRNAVDSLTHQLAAKERQLADLRRQTEALPPDMARAQHQL EYMRTKVVTLERHNSDLLCRTDYDMAAAYHARKELAVQHNAFANHITTLK LDLDQIYAERDRLSERVQQLEQRLLDSDVDRCMLSLVSAERDQLEERLQQ ASSGDMSSIAAENARLKMQTELTHTKRRMETITKKLLEALHHKQQLALEV QSRLHNEASMLQMFGDLKKETQRLRDERDLAAQNAQQMEQTVGDMKEKAD KYEAVCEQRDQSIQRADQLQTAYTELANILGCSSVPTEQMDTEQLSSIVN NARFRLQRSEIERQSTAELAAMRETELDRLEKLLRKERDARANAERRIER IASKHVALAAAIGHRECPVDAESGLADIFPHVRRLSEVTRSQQETILNLR QQLADRELAVETSAMEVEKLKHVRRRIKTEANDLENTVHTLEAEVASLSK ENSAMKGALQSMEQESQQHAGLSEVLRLEKERNAANVRGHGMELAHLRSE IAQKQVEIEKSASEIEHVHKLVADLQAACEGLQAEKNGLEHEISRKIEEN DVMTGELDDAVTKIEQLRSDCAELQAELGEQDRIVSQEREELAEQLAERT ENFAKVEAELNDARRTYIEAAENFEMQTAALTKRLNASQREKQEFKNIVA AMSSRSGEDGETRLLKAARRCEKLERENESLRKRMGRGDGRGRGTGHEDG GSVKSDASSFTSVLTATSAGSDDTGFDRVQQLQGLLEEETRVKEDKSKRL QEAELSLKEMVAEMEKMKGLAKEKEREAEGLRSEMKSIHSRMRKMAHVSM PRDYEKWLEEDDEDMERLQQVREATRKERDADRRSKGRRKSKGLTMENKG G* back to topmRNA from alignment at NODE_1478_length_10346_cov_3.733886:1988..4543+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gcaud10197.t1 ID=Gcaud10197.t1|Name=Gcaud10197.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2556bp|location=Sequence derived from alignment at NODE_1478_length_10346_cov_3.733886:1988..4543+ (Gracilaria caudata M_176_S67 male) ATGCGTCTTTTGCGCGAACAACGCACGCAGCTTCGAAACGCCGTCGATTC
TCTCACTCATCAACTTGCCGCCAAGGAGCGTCAGCTTGCCGACCTGCGTC
GCCAAACTGAAGCGCTGCCGCCGGACATGGCGCGTGCGCAGCACCAATTG
GAGTACATGCGCACCAAAGTCGTGACGTTGGAGCGACACAATTCCGACTT
GCTTTGTCGCACCGATTATGATATGGCCGCTGCCTATCACGCCAGAAAGG
AATTGGCTGTGCAGCATAATGCATTTGCCAATCATATCACTACCCTGAAG
CTTGACCTTGACCAAATATACGCCGAGCGAGATCGTTTGTCCGAGCGCGT
GCAGCAGCTTGAGCAGCGTTTACTAGACTCTGACGTGGACAGATGCATGC
TATCTCTCGTTTCTGCGGAGCGCGACCAATTGGAAGAGCGTTTGCAGCAA
GCCTCATCCGGCGACATGTCATCCATCGCCGCCGAGAACGCGCGCCTCAA
GATGCAAACCGAACTCACGCATACAAAACGCCGCATGGAAACCATCACAA
AGAAACTGCTCGAGGCGTTGCATCACAAGCAACAACTTGCTCTCGAAGTG
CAGAGCAGGCTGCATAACGAAGCCAGTATGCTGCAAATGTTTGGCGACCT
CAAGAAAGAAACCCAACGTCTGCGAGATGAACGTGATCTGGCCGCACAAA
ACGCGCAACAAATGGAACAAACCGTGGGTGATATGAAGGAGAAGGCCGAT
AAGTATGAAGCTGTATGTGAGCAAAGAGACCAGTCCATTCAACGTGCAGA
CCAACTTCAGACCGCTTACACTGAATTGGCCAATATTCTTGGTTGTTCAT
CTGTCCCGACCGAGCAGATGGATACTGAACAACTCAGTTCCATTGTGAAC
AACGCTCGATTCCGCCTGCAGCGCAGTGAGATTGAACGGCAGTCAACCGC
CGAACTTGCCGCCATGCGCGAAACAGAGCTCGATCGCTTGGAGAAACTTC
TGCGAAAGGAACGTGATGCGAGAGCTAATGCGGAACGCCGCATCGAACGT
ATTGCTTCCAAACATGTGGCGCTAGCGGCGGCAATCGGGCATCGAGAGTG
CCCAGTGGATGCTGAAAGTGGTCTTGCTGACATCTTTCCACACGTGCGCC
GTTTGTCCGAGGTGACGAGATCGCAGCAGGAAACCATTCTCAACTTGAGG
CAACAGTTGGCCGATCGTGAGCTTGCCGTGGAGACCAGTGCTATGGAGGT
GGAGAAACTGAAGCACGTTCGCCGCAGAATCAAGACAGAGGCCAACGATC
TTGAGAACACGGTGCACACCCTGGAGGCGGAGGTTGCGTCGCTCTCCAAG
GAGAACAGTGCCATGAAGGGCGCACTGCAGAGCATGGAGCAAGAAAGCCA
GCAACATGCGGGACTTTCTGAGGTGCTCCGCCTCGAGAAGGAGCGCAATG
CGGCGAACGTGAGAGGTCATGGCATGGAGTTGGCCCATCTGCGCTCTGAG
ATTGCACAGAAGCAGGTGGAGATTGAGAAGAGCGCCAGTGAAATCGAACA
CGTGCACAAACTGGTGGCAGATTTGCAAGCTGCGTGTGAGGGGTTGCAGG
CTGAGAAGAATGGGTTGGAACATGAGATTTCTAGGAAGATTGAGGAGAAC
GACGTTATGACGGGGGAATTAGACGATGCTGTGACGAAAATCGAACAGCT
TCGCTCGGACTGCGCGGAGTTACAGGCAGAACTGGGCGAACAGGATCGCA
TTGTGTCGCAGGAACGCGAGGAACTTGCAGAGCAACTGGCGGAACGGACG
GAGAACTTTGCAAAGGTGGAGGCGGAATTGAATGACGCGCGAAGGACGTA
TATCGAAGCGGCGGAGAACTTTGAGATGCAAACGGCGGCTTTGACGAAAC
GTCTGAACGCATCGCAGCGAGAGAAACAGGAGTTCAAGAACATTGTGGCG
GCGATGAGCTCACGCTCGGGAGAGGATGGGGAGACACGATTGCTCAAGGC
TGCACGCAGGTGTGAGAAACTGGAACGAGAAAACGAGAGTTTGCGAAAGC
GGATGGGACGTGGCGATGGTAGGGGCAGGGGGACGGGTCATGAGGATGGA
GGCTCTGTGAAGTCGGATGCCAGTTCGTTTACTAGTGTGCTTACTGCGAC
TTCTGCGGGCAGCGATGACACAGGGTTTGATCGTGTGCAGCAGCTGCAGG
GGTTGCTGGAAGAGGAGACGAGAGTGAAAGAGGACAAGTCGAAGCGTCTG
CAGGAGGCGGAACTGAGCTTgaaggaaatggtggcggagatggagaagat
gaagggactggcgaaggagaaggagCGCGAGGCCGAAGGTCTAAGGAGTG
AAATGAAGAGCATTCACTCGCGAATGAGGAAGATGGCGCATGTTTCGATG
CCGAGGGACTACGAGAAATGGCTTGAGGAGGATGATGAGGATATGGAACG
TTTGCAACAGGTGAGAGAGGCGACGAGGAAGGAACGGGATGCGGATCGAA
GGTCGAAGGGACGAAGAAAATCGAAGGGTTTGACGATGGAGAACAAGGGG
GGATAA back to topCoding sequence (CDS) from alignment at NODE_1478_length_10346_cov_3.733886:1988..4543+ >Gcaud10197.t1 ID=Gcaud10197.t1|Name=Gcaud10197.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=2556bp|location=Sequence derived from alignment at NODE_1478_length_10346_cov_3.733886:1988..4543+ (Gracilaria caudata M_176_S67 male) ATGCGTCTTTTGCGCGAACAACGCACGCAGCTTCGAAACGCCGTCGATTC TCTCACTCATCAACTTGCCGCCAAGGAGCGTCAGCTTGCCGACCTGCGTC GCCAAACTGAAGCGCTGCCGCCGGACATGGCGCGTGCGCAGCACCAATTG GAGTACATGCGCACCAAAGTCGTGACGTTGGAGCGACACAATTCCGACTT GCTTTGTCGCACCGATTATGATATGGCCGCTGCCTATCACGCCAGAAAGG AATTGGCTGTGCAGCATAATGCATTTGCCAATCATATCACTACCCTGAAG CTTGACCTTGACCAAATATACGCCGAGCGAGATCGTTTGTCCGAGCGCGT GCAGCAGCTTGAGCAGCGTTTACTAGACTCTGACGTGGACAGATGCATGC TATCTCTCGTTTCTGCGGAGCGCGACCAATTGGAAGAGCGTTTGCAGCAA GCCTCATCCGGCGACATGTCATCCATCGCCGCCGAGAACGCGCGCCTCAA GATGCAAACCGAACTCACGCATACAAAACGCCGCATGGAAACCATCACAA AGAAACTGCTCGAGGCGTTGCATCACAAGCAACAACTTGCTCTCGAAGTG CAGAGCAGGCTGCATAACGAAGCCAGTATGCTGCAAATGTTTGGCGACCT CAAGAAAGAAACCCAACGTCTGCGAGATGAACGTGATCTGGCCGCACAAA ACGCGCAACAAATGGAACAAACCGTGGGTGATATGAAGGAGAAGGCCGAT AAGTATGAAGCTGTATGTGAGCAAAGAGACCAGTCCATTCAACGTGCAGA CCAACTTCAGACCGCTTACACTGAATTGGCCAATATTCTTGGTTGTTCAT CTGTCCCGACCGAGCAGATGGATACTGAACAACTCAGTTCCATTGTGAAC AACGCTCGATTCCGCCTGCAGCGCAGTGAGATTGAACGGCAGTCAACCGC CGAACTTGCCGCCATGCGCGAAACAGAGCTCGATCGCTTGGAGAAACTTC TGCGAAAGGAACGTGATGCGAGAGCTAATGCGGAACGCCGCATCGAACGT ATTGCTTCCAAACATGTGGCGCTAGCGGCGGCAATCGGGCATCGAGAGTG CCCAGTGGATGCTGAAAGTGGTCTTGCTGACATCTTTCCACACGTGCGCC GTTTGTCCGAGGTGACGAGATCGCAGCAGGAAACCATTCTCAACTTGAGG CAACAGTTGGCCGATCGTGAGCTTGCCGTGGAGACCAGTGCTATGGAGGT GGAGAAACTGAAGCACGTTCGCCGCAGAATCAAGACAGAGGCCAACGATC TTGAGAACACGGTGCACACCCTGGAGGCGGAGGTTGCGTCGCTCTCCAAG GAGAACAGTGCCATGAAGGGCGCACTGCAGAGCATGGAGCAAGAAAGCCA GCAACATGCGGGACTTTCTGAGGTGCTCCGCCTCGAGAAGGAGCGCAATG CGGCGAACGTGAGAGGTCATGGCATGGAGTTGGCCCATCTGCGCTCTGAG ATTGCACAGAAGCAGGTGGAGATTGAGAAGAGCGCCAGTGAAATCGAACA CGTGCACAAACTGGTGGCAGATTTGCAAGCTGCGTGTGAGGGGTTGCAGG CTGAGAAGAATGGGTTGGAACATGAGATTTCTAGGAAGATTGAGGAGAAC GACGTTATGACGGGGGAATTAGACGATGCTGTGACGAAAATCGAACAGCT TCGCTCGGACTGCGCGGAGTTACAGGCAGAACTGGGCGAACAGGATCGCA TTGTGTCGCAGGAACGCGAGGAACTTGCAGAGCAACTGGCGGAACGGACG GAGAACTTTGCAAAGGTGGAGGCGGAATTGAATGACGCGCGAAGGACGTA TATCGAAGCGGCGGAGAACTTTGAGATGCAAACGGCGGCTTTGACGAAAC GTCTGAACGCATCGCAGCGAGAGAAACAGGAGTTCAAGAACATTGTGGCG GCGATGAGCTCACGCTCGGGAGAGGATGGGGAGACACGATTGCTCAAGGC TGCACGCAGGTGTGAGAAACTGGAACGAGAAAACGAGAGTTTGCGAAAGC GGATGGGACGTGGCGATGGTAGGGGCAGGGGGACGGGTCATGAGGATGGA GGCTCTGTGAAGTCGGATGCCAGTTCGTTTACTAGTGTGCTTACTGCGAC TTCTGCGGGCAGCGATGACACAGGGTTTGATCGTGTGCAGCAGCTGCAGG GGTTGCTGGAAGAGGAGACGAGAGTGAAAGAGGACAAGTCGAAGCGTCTG CAGGAGGCGGAACTGAGCTTgaaggaaatggtggcggagatggagaagat gaagggactggcgaaggagaaggagCGCGAGGCCGAAGGTCTAAGGAGTG AAATGAAGAGCATTCACTCGCGAATGAGGAAGATGGCGCATGTTTCGATG CCGAGGGACTACGAGAAATGGCTTGAGGAGGATGATGAGGATATGGAACG TTTGCAACAGGTGAGAGAGGCGACGAGGAAGGAACGGGATGCGGATCGAA GGTCGAAGGGACGAAGAAAATCGAAGGGTTTGACGATGGAGAACAAGGGG GGATAA back to top
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