Gcaud10193.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud10193.t1
Unique NameGcaud10193.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length103
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud10193.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 18..54
e-value: 6.0
score: 15.6
coord: 56..92
e-value: 1.2
score: 18.2
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 19..48
e-value: 1.7E-4
score: 22.2
coord: 58..91
e-value: 0.0018
score: 18.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 10..103
e-value: 3.2E-16
score: 61.2
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 14..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_10996_length_512_cov_4.719715contigNODE_10996_length_512_cov_4.719715:2..308 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud10193.t1Gcaud10193.t1Gracilaria caudata M_176_S67 malemRNANODE_10996_length_512_cov_4.719715 2..308 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud10193.t1 ID=Gcaud10193.t1|Name=Gcaud10193.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=103bp
MSGRIIVSDRTTNEGGHIDAMYNLANVLAAGAPGVPQDAPSAVKLYERPI
EVGGHHGAMSKLASLLTNGAPGIAVNASRAAELYRRAIEEGGRADAMYYL
ANX
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf