Gcaud10093.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud10093.t1
Unique NameGcaud10093.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length452
Homology
BLAST of Gcaud10093.t1 vs. uniprot
Match: A0A2V3IM88_9FLOR (H/ACA ribonucleoprotein complex subunit 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM88_9FLOR)

HSP 1 Score: 726 bits (1873), Expect = 1.320e-260
Identity = 368/433 (84.99%), Postives = 393/433 (90.76%), Query Frame = 0
Query:    2 DTSKWPLLLRNYDKLNVRSSHFTPIPVGHSPLKRPIQEYIRYGVINLDKPSNPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKIRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVKEEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKYGKPNDKTPADWQTTYKELSVPQQDQ-ASVQRTA-VAIPENGEVQTGRNGSTLKSGEPVD-EKAPGMDVEDVITPDNK 431
            DTSKWPLLL+NYD LNVRSSHFTPIPVGHSPL RPI EY+RYGVINLDKPSNPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+GVLKLHG+LGENPVSK+RRAVEMLTGALFQRPPLISAVKRQLRIRT+YEAKLLEYDE KRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWV+DNQRDESYLRSVIQPLEALLVN+KRIVVKDTAVNAICYGAVLMIPGVLRF+DDI+V +E+ LITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRV+MERDTYPRAWGLGP AGKKKGLIREGKLDKYG  N+KTPADW+ +YK L+VP   Q +S +R+A VA P NG               P   E+ P M+VED +TPD++
Sbjct:   28 DTSKWPLLLKNYDTLNVRSSHFTPIPVGHSPLSRPILEYLRYGVINLDKPSNPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVGVLKLHGELGENPVSKVRRAVEMLTGALFQRPPLISAVKRQLRIRTVYEAKLLEYDEAKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVYDNQRDESYLRSVIQPLEALLVNFKRIVVKDTAVNAICYGAVLMIPGVLRFEDDIDVGQEVALITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVVMERDTYPRAWGLGPTAGKKKGLIREGKLDKYGNHNEKTPADWKNSYKSLNVPPPAQPSSEERSADVAAPANGSTPALPPKVHKSEESPFSAEEVPSMEVEDAVTPDDR 460          
BLAST of Gcaud10093.t1 vs. uniprot
Match: R7Q3X0_CHOCR (Box H/ACA snoRNP rRNA pseudouridine syntase component dyskerin n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3X0_CHOCR)

HSP 1 Score: 631 bits (1627), Expect = 1.870e-223
Identity = 309/434 (71.20%), Postives = 368/434 (84.79%), Query Frame = 0
Query:    2 DTSKWPLLLRNYDKLNVRSSHFTPIPVGHSPLKRPIQEYIRYGVINLDKPSNPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKIRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVKEEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKYGKPNDKTPADWQTTYKELSVPQQDQASVQRTAVAIPENGEVQTGRNGSTLKSGEPVDEKAPGMDVEDVITPDNKSDKK 435
            DTSKWPLLL+NYD LNVR++HFTPIPVG SP KRP+ +Y+RYGVINLDKP+NPSSHEVVAWIKRIL+VDKTGHSGTLDPKVTG LIVCIDR+TRLVKSQQGAGKEY+ V+KLHG LGENPV+++RR V++LTGALFQRPPLISAVKRQLRIRT+Y++KLLE+D+K+ L VFWVKCEAGTYIRTLCVHLGYLLGVGG+M ELRR+RSG+MGE+  M TMHDVLDA WV++N RDESYLR+VI+PLE+LL  +KR+V KD+AVN+ICYGAVLMIPG+LRF+D IEV EEIV++TTKGEA+A+A+AEMNTAV+ATCDHGR+ARIKRV+MERDTYPR WGLGP+A KKKGL+++GKLDK+G+PN+ TP +W     +LSV     A         P N  ++     ST K+     E  PG  VE+  TPD  S+KK
Sbjct:   22 DTSKWPLLLKNYDALNVRTAHFTPIPVGCSPHKRPLHDYVRYGVINLDKPANPSSHEVVAWIKRILKVDKTGHSGTLDPKVTGCLIVCIDRSTRLVKSQQGAGKEYVAVVKLHGSLGENPVTQMRRGVDLLTGALFQRPPLISAVKRQLRIRTVYQSKLLEFDDKRNLGVFWVKCEAGTYIRTLCVHLGYLLGVGGNMQELRRIRSGVMGEDTGMYTMHDVLDAQWVYENNRDESYLRTVIKPLESLLTGHKRVVAKDSAVNSICYGAVLMIPGLLRFEDGIEVGEEIVIMTTKGEAVALAVAEMNTAVMATCDHGRIARIKRVVMERDTYPRKWGLGPMASKKKGLVQQGKLDKHGRPNESTPKEWGQMQPDLSVAAAVAAVTSPVKADAPSNDAMEV----STPKTD--AGEATPGDKVENATTPDT-SEKK 448          
BLAST of Gcaud10093.t1 vs. uniprot
Match: A0A7S0ZE13_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE13_9RHOD)

HSP 1 Score: 596 bits (1536), Expect = 1.360e-209
Identity = 280/374 (74.87%), Postives = 333/374 (89.04%), Query Frame = 0
Query:    3 TSKWPLLLRNYDKLNVRSSHFTPIPVGHSPLKRPIQEYIRYGVINLDKPSNPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKIRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVKEEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKYGKPNDKTPADWQTTYKELS 376
            T+ WPLLL+NYD+LNVRSSH+TPIP G+SPLKRP+ EY+RYG+INLDKP+NPSSHEVVAWIKRILR +KTGHSGTLDPKVTG LIVCIDRATRLVKSQQ AGKEY+GV +LH  LGEN + KI RA+EMLTGA+FQRPPLISAVKRQLR+RTIYE+KL+EYD+++RL VFWV CEAGTYIRTLCVHLG LLGVGG M ELRRVRSG  GE E MVTMHDVLDA W +DN +DE+YLR V++PLEALLV + R+++KD++VNA+CYGA LMIPG+LRF+DDIEV +E+V++TTKGEA+A+AIAEM +A++ATCDHG VARIKRVIMERDTYPR WGLGP+A KKK ++++GKLDK+GK ND+TPA W   +  L+
Sbjct:   36 TADWPLLLKNYDRLNVRSSHYTPIPCGNSPLKRPLIEYLRYGMINLDKPANPSSHEVVAWIKRILRCEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQSAGKEYVGVFRLHASLGENALPKIERALEMLTGAVFQRPPLISAVKRQLRVRTIYESKLIEYDDERRLGVFWVSCEAGTYIRTLCVHLGLLLGVGGHMQELRRVRSGAQGEGEGMVTMHDVLDAQWTYDNTKDETYLRRVVKPLEALLVKHSRLIIKDSSVNAVCYGAKLMIPGLLRFEDDIEVGQEVVIVTTKGEAVALAIAEMTSAIMATCDHGVVARIKRVIMERDTYPRRWGLGPMASKKKQMVKDGKLDKHGKSNDQTPASWTKEHPSLA 409          
BLAST of Gcaud10093.t1 vs. uniprot
Match: A0A7S1TLW0_9RHOD (Hypothetical protein n=2 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLW0_9RHOD)

HSP 1 Score: 592 bits (1527), Expect = 1.390e-208
Identity = 285/422 (67.54%), Postives = 347/422 (82.23%), Query Frame = 0
Query:    2 DTSKWPLLLRNYDKLNVRSSHFTPIPVGHSPLKRPIQEYIRYGVINLDKPSNPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKIRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVKEEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKYGKPNDKTPADWQTTYKELSVPQQDQASVQRTAVAIPENGEVQTGRNGSTLKSGEPVDEKAPGMDVE 423
            DTS+WPLLL+N+DKLNVRS+H+TPIP GHSPLKRP+QEY+RYG+INLDKP+NPSSHEVVAW+K+ILR +KTGHSGTLDP+VTG LIVCIDRATRLVKSQQ AGKEY+GVL+LH  LG+N  ++++RAVE LTGA+FQRPPLISAVKRQLRIRTIYE++L+EYD+ +RL VFWV CEAGTYIRTLCVHLG LLGVGG M ELRRVRSG   E E +V+MHDVLDA W++DN +DESYLR V++PLEALLV + R+V+KD++VNAICYGA LMIPG+LR++DDIEV +EIV+++TKGEA+A+AIAEM +AV+ATCDHG VARIKRVIMERDTYPR WGLGP+A KKK ++++GKL K+G+ N+ TPA W   + +LS P +   S                G +  T  S EPV       D +
Sbjct:   26 DTSEWPLLLKNFDKLNVRSAHYTPIPSGHSPLKRPLQEYLRYGMINLDKPANPSSHEVVAWVKKILRCEKTGHSGTLDPQVTGCLIVCIDRATRLVKSQQSAGKEYVGVLRLHASLGDNAEARVKRAVETLTGAVFQRPPLISAVKRQLRIRTIYESRLIEYDDARRLGVFWVSCEAGTYIRTLCVHLGLLLGVGGHMQELRRVRSGAQSEREGLVSMHDVLDAQWLYDNNKDESYLRRVVKPLEALLVKHPRVVIKDSSVNAICYGAKLMIPGLLRYEDDIEVGQEIVIVSTKGEAVALAIAEMTSAVMATCDHGVVARIKRVIMERDTYPRRWGLGPMASKKKQMVKDGKLTKHGRTNENTPASWSKEHPKLSPPLEQAPSA---------------GNHAETKSSDEPVSGNRAATDAD 432          
BLAST of Gcaud10093.t1 vs. uniprot
Match: UPI00125D9BD6 (H/ACA ribonucleoprotein complex subunit 4-like n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125D9BD6)

HSP 1 Score: 594 bits (1531), Expect = 1.770e-207
Identity = 285/367 (77.66%), Postives = 330/367 (89.92%), Query Frame = 0
Query:    2 DTSKWPLLLRNYDKLNVRSSHFTPIPVGHSPLKRPIQEYIRYGVINLDKPSNPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKIRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVKEEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKYGKPNDKTPADW 368
            DTS+WP+LL+NYD+LNVR+ H+TP+P G+SPLKRP+ EYIRYGV+NLDKPSNPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+ V +LH D+ +  V+K+ RA+E LTGA+FQRPPLISAVKRQLRIRTIYE+KLLEYD  + L VFW+ CEAGTY+RT+CVHLG LLGVGG M ELRRVRSGI GE++NMVTMHDV+DA WV+DN RDESYLR VI PLE LL +YKR+VVKD+AVNAICYGA LMIPG+LRF++DIEV EE+VL+TTKGEAIA+ IAEM TAV+ATCDHG VA+IKRV+M+RDTYPR WGLGP A  KK LI +GKLDK+GKPN+KTPA+W
Sbjct:   50 DTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGVLNLDKPSNPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSDVPD--VAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADRHLVVFWISCEAGTYVRTMCVHLGLLLGVGGHMQELRRVRSGISGEKDNMVTMHDVMDAQWVYDNYRDESYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTPAEW 414          
BLAST of Gcaud10093.t1 vs. uniprot
Match: A0A2J6K8G3_LACSA (Uncharacterized protein n=3 Tax=Asteraceae TaxID=4210 RepID=A0A2J6K8G3_LACSA)

HSP 1 Score: 587 bits (1514), Expect = 8.870e-207
Identity = 282/367 (76.84%), Postives = 327/367 (89.10%), Query Frame = 0
Query:    2 DTSKWPLLLRNYDKLNVRSSHFTPIPVGHSPLKRPIQEYIRYGVINLDKPSNPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKIRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVKEEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKYGKPNDKTPADW 368
            DTS+WP+LL+NYD+LNVR+ H+TP+P G+SPLKRP+ EYIRYGVINLDKP+NPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+ V +LH D+ +  V+K+ RA+E LTGA+FQRPPLISAVKRQLRIRTIYE+KLLEYD  K L VFW+ CEAGTY+RTLCVHLG +LGVGG M ELRRVRSGIMGE++NM+TMHDV+DA W +DN RDE+YLR VI PLE LL +YKR+VVKD+AVNAICYGA LMIPG+LRF++DIE  EE+VL+TTKGEAIA+ IAEM TAV+ATCDHG VA+IKRV+M+RDTYPR WGLGP A  KK LI EGKL K+GK N+KTPA+W
Sbjct:   49 DTSEWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSDVPD--VAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGIMGEKDNMITMHDVMDAQWSYDNYRDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIENGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPTASMKKKLITEGKLSKHGKANEKTPAEW 413          
BLAST of Gcaud10093.t1 vs. uniprot
Match: A0A7S0STD5_9CHLO (Hypothetical protein n=3 Tax=Mamiellaceae TaxID=41873 RepID=A0A7S0STD5_9CHLO)

HSP 1 Score: 588 bits (1517), Expect = 1.600e-206
Identity = 283/376 (75.27%), Postives = 327/376 (86.97%), Query Frame = 0
Query:    2 DTSKWPLLLRNYDKLNVRSSHFTPIPVGHSPLKRPIQEYIRYGVINLDKPSNPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKIRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVKEEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKYGKPNDKTPADWQTTYKELSV 377
            D SKWPLLL+NYDKL VR+ H+TPIP GHSPLKRP+QEYIRYGVINLDKP+NPSSHEVVAW+KR+LRV+KTGHSGTLDPKVTG LIVCIDRATRLVK+QQGAGKEY+ + +LH    E   + + RA+E LTGALFQRPPLISAVKRQLRIRTIYE+K+ EYDE++ L VFW+ CEAGTY+RT+CVHLG LLGVGG M ELRRVRSGI+GEE+N+VTMHDV+DAMWVHDN + E YLR  I PLE LL NYKR+VVKD+AVNAICYGA LMIPG+LR++  IEV EE+VL+TTKGEAIA+ +A+MNTAV+ATCDHG VA+IKRV+MERDTYPR WGLGP A  KK LI EGKLDK+GKPNDKTPA++     +LSV
Sbjct:   54 DASKWPLLLKNYDKLMVRTGHYTPIPCGHSPLKRPLQEYIRYGVINLDKPANPSSHEVVAWLKRMLRVEKTGHSGTLDPKVTGGLIVCIDRATRLVKAQQGAGKEYVCIARLHS-APEGGKAAVLRAIETLTGALFQRPPLISAVKRQLRIRTIYESKMYEYDEERNLVVFWISCEAGTYVRTMCVHLGLLLGVGGHMQELRRVRSGILGEEQNLVTMHDVMDAMWVHDNLKQEDYLRRAIMPLEVLLTNYKRVVVKDSAVNAICYGAKLMIPGLLRYEAGIEVGEEVVLMTTKGEAIAVGLAQMNTAVMATCDHGCVAKIKRVVMERDTYPRRWGLGPTAQAKKKLIAEGKLDKFGKPNDKTPAEYLRAVPDLSV 428          
BLAST of Gcaud10093.t1 vs. uniprot
Match: M1AB98_SOLTU (H/ACA ribonucleoprotein complex subunit 4 n=7 Tax=cellular organisms TaxID=131567 RepID=M1AB98_SOLTU)

HSP 1 Score: 591 bits (1523), Expect = 2.350e-206
Identity = 281/367 (76.57%), Postives = 329/367 (89.65%), Query Frame = 0
Query:    2 DTSKWPLLLRNYDKLNVRSSHFTPIPVGHSPLKRPIQEYIRYGVINLDKPSNPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKIRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVKEEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKYGKPNDKTPADW 368
            DTS+WP+LL+NYD+LNVR+ H+TP+P G+SPLKRP+ EYIRYG++NLDKP+NPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+ V +LH D+ +  V+K+ RA+E LTGA+FQRPPLISAVKRQLRIRTIYE+KLLEYD  + L VFW+ CEAGTY+RTLCVHLG LLGVGG M ELRRVRSGI+GE+ NMVTMHDV+DA W++DN RDE+YLR VI PLE +L +YKR+VVKD+AVNAICYGA LMIPG+LRF++DIEV EE+VL+TTKGEAIA+ IAEM TAV+ TCDHG VA+IKRV+M+RDTYPR WGLGP A  KK L+ EGKLDK+GKPNDKTPA+W
Sbjct:   48 DTSEWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSDVPD--VAKVARALEALTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADRHLVVFWISCEAGTYVRTLCVHLGLLLGVGGHMQELRRVRSGILGEKNNMVTMHDVMDAQWMYDNYRDETYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMGTCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEW 412          
BLAST of Gcaud10093.t1 vs. uniprot
Match: UPI00053C305A (H/ACA ribonucleoprotein complex subunit 4-like n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C305A)

HSP 1 Score: 592 bits (1525), Expect = 3.060e-206
Identity = 292/393 (74.30%), Postives = 337/393 (85.75%), Query Frame = 0
Query:    2 DTSKWPLLLRNYDKLNVRSSHFTPIPVGHSPLKRPIQEYIRYGVINLDKPSNPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKIRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVKEEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKYGKPNDKTPADWQTTYKELSVPQQDQASVQRTAVAIPE 394
            DTS+WP+LL+NYD+LNVR+ H+TP+P G SPLKRP+QEYIRYGVINLDKP+NPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+ V +LH  + +  V+K+ RA+E LTGA+FQRPPLISAVKRQLRIRTIYE+KLLEYD  + L VFWV CEAGTYIRT+CVHLG LLGVGG M ELRRVRSGIMGE +NMVTMHDV+DA W++DN RDE+YLR VI PLE LL +YKR+VVKD+AVNAICYGA LMIPG+LRF++DIEV EE+VL+TTKGEAIAI IAEM TAV+ATCDHG VA+IKRV+M+RD YPR WGLGP A  KK LI +GKLDK+GKPN+KTP +W    + + +P    A V   A A PE
Sbjct:   51 DTSQWPILLKNYDRLNVRTGHYTPLPSGFSPLKRPLQEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPD--VAKVARALEALTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADRHLVVFWVSCEAGTYIRTMCVHLGLLLGVGGHMQELRRVRSGIMGERDNMVTMHDVMDAQWMYDNYRDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGVVAKIKRVVMDRDMYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTPQEW---LRNVVLPPGGDAMVAGIAAAAPE 438          
BLAST of Gcaud10093.t1 vs. uniprot
Match: A0A1U8AZ18_NELNU (H/ACA ribonucleoprotein complex subunit 4 n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AZ18_NELNU)

HSP 1 Score: 592 bits (1526), Expect = 3.250e-206
Identity = 291/397 (73.30%), Postives = 341/397 (85.89%), Query Frame = 0
Query:    2 DTSKWPLLLRNYDKLNVRSSHFTPIPVGHSPLKRPIQEYIRYGVINLDKPSNPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKIRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVKEEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKYGKPNDKTPADWQTTYKELSVPQQDQASVQRTAVA-IPENGE 397
            DTS+WP+LL+NYD+LNVR+ H+TP+P G+SPLKRP+ +YI+YG+INLDKP+NPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCI+RATRLVKSQQGAGKEY+ V +LH  + +  V K+ RA+E LTGALFQRPPLISAVKRQLRIRTIYE+KLLEYD  K L VFW+ CEAGTY+RTLCVHLG +LGVGG M ELRRVRSGI GE++NMVTMHDV+DA W++DN RDESYLR VI PLE LL +YKR+VVKD+AVNAICYGA LMIPG+LRF++DIEV EE+VL+TTKGEAIA+ IAEM TAV+ATCDHG VARIKRV+M+RDTYPR WGLGP A  KK LI +GKLDK+GKPN+KTPA+W    + + +P    + V   A A +PE GE
Sbjct:   60 DTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLDQYIQYGIINLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCINRATRLVKSQQGAGKEYVCVARLHSAVPD--VGKVARALETLTGALFQRPPLISAVKRQLRIRTIYESKLLEYDPDKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGISGEKDNMVTMHDVMDAQWLYDNYRDESYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVARIKRVVMDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTPAEW---LRNVVLPTGGDSMVAGLAAAPVPEKGE 451          
The following BLAST results are available for this feature:
BLAST of Gcaud10093.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IM88_9FLOR1.320e-26084.99H/ACA ribonucleoprotein complex subunit 4 n=1 Tax=... [more]
R7Q3X0_CHOCR1.870e-22371.20Box H/ACA snoRNP rRNA pseudouridine syntase compon... [more]
A0A7S0ZE13_9RHOD1.360e-20974.87Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1TLW0_9RHOD1.390e-20867.54Hypothetical protein n=2 Tax=Erythrolobus australi... [more]
UPI00125D9BD61.770e-20777.66H/ACA ribonucleoprotein complex subunit 4-like n=1... [more]
A0A2J6K8G3_LACSA8.870e-20776.84Uncharacterized protein n=3 Tax=Asteraceae TaxID=4... [more]
A0A7S0STD5_9CHLO1.600e-20675.27Hypothetical protein n=3 Tax=Mamiellaceae TaxID=41... [more]
M1AB98_SOLTU2.350e-20676.57H/ACA ribonucleoprotein complex subunit 4 n=7 Tax=... [more]
UPI00053C305A3.060e-20674.30H/ACA ribonucleoprotein complex subunit 4-like n=1... [more]
A0A1U8AZ18_NELNU3.250e-20673.30H/ACA ribonucleoprotein complex subunit 4 n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002478PUA domainSMARTSM00359pua_5coord: 253..327
e-value: 7.1E-19
score: 78.7
IPR002478PUA domainPFAMPF01472PUAcoord: 253..326
e-value: 6.1E-19
score: 67.7
IPR012960Dyskerin-likeSMARTSM01136DKCLD_2coord: 2..60
e-value: 1.4E-34
score: 130.9
IPR012960Dyskerin-likePFAMPF08068DKCLDcoord: 3..60
e-value: 2.7E-32
score: 110.6
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 36..244
e-value: 1.0E-176
score: 588.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..452
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 378..452
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 414..436
NoneNo IPR availablePANTHERPTHR23127:SF0H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT DKC1coord: 2..448
NoneNo IPR availablePROSITEPS50890PUAcoord: 252..327
score: 17.807489
NoneNo IPR availableCDDcd02572PseudoU_synth_hDyskerincoord: 42..226
e-value: 3.37185E-131
score: 374.291
IPR032819tRNA pseudouridylate synthase B, C-terminalPFAMPF16198TruB_C_2coord: 183..249
e-value: 5.1E-21
score: 74.6
IPR004521Uncharacterised domain CHP00451TIGRFAMTIGR00451TIGR00451coord: 244..322
e-value: 1.3E-9
score: 36.2
IPR004802tRNA pseudouridine synthase B familyTIGRFAMTIGR00425TIGR00425coord: 11..337
e-value: 5.5E-156
score: 516.6
IPR004802tRNA pseudouridine synthase B familyPANTHERPTHR23127CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5coord: 2..448
IPR036974PUA domain superfamilyGENE3D2.30.130.10PUA domaincoord: 3..336
e-value: 1.0E-176
score: 588.8
IPR002501Pseudouridine synthase II, N-terminalPFAMPF01509TruB_Ncoord: 64..182
e-value: 5.5E-20
score: 72.3
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 252..334
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 3..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_5922_length_1355_cov_6.178006contigNODE_5922_length_1355_cov_6.178006:2..1355 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud10093.t1Gcaud10093.t1Gracilaria caudata M_176_S67 malemRNANODE_5922_length_1355_cov_6.178006 2..1355 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud10093.t1 ID=Gcaud10093.t1|Name=Gcaud10093.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=452bp
XDTSKWPLLLRNYDKLNVRSSHFTPIPVGHSPLKRPIQEYIRYGVINLDK
PSNPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQ
QGAGKEYIGVLKLHGDLGENPVSKIRRAVEMLTGALFQRPPLISAVKRQL
RIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSML
ELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLV
NYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVKEEIVLITTKGEAIA
IAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIR
EGKLDKYGKPNDKTPADWQTTYKELSVPQQDQASVQRTAVAIPENGEVQT
GRNGSTLKSGEPVDEKAPGMDVEDVITPDNKSDKKKKKDKKEKSSKKKRK
RX
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002478PUA
IPR012960Dyskerin-like
IPR032819TruB_C
IPR004521Uncharacterised_CHP00451
IPR004802tRNA_PsdUridine_synth_B_fam
IPR036974PUA_sf
IPR002501PsdUridine_synth_N
IPR015947PUA-like_sf
IPR020103PsdUridine_synth_cat_dom_sf