Gcaud10091.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud10091.t1
Unique Name	Gcaud10091.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	81

Homology

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BLAST of Gcaud10091.t1 vs. uniprot
Match: A0A2V3IQ12_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ12_9FLOR)

HSP 1 Score: 77.8 bits (190), Expect = 3.550e-17
Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 0

Query:    4 AADKNLKEDAKPASQK-KRRAQPGDFEKQVDRIRRDISTIRSNLAAAEKALDVTGVPYDAPPEQVTDKKDDA 74
            AA KN  +   P++QK KRRAQPGDFE+QV+ IRRDI TIRSNLAAAEKALD +G+P+D   E   +  +D+
Sbjct:    3 AASKNNGDTPPPSAQKPKRRAQPGDFERQVEHIRRDIGTIRSNLAAAEKALDNSGIPFDQSQEPHPENNEDS 74

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BLAST of Gcaud10091.t1 vs. uniprot
Match: R7QKY2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKY2_CHOCR)

HSP 1 Score: 57.8 bits (138), Expect = 3.240e-9
Identity = 27/39 (69.23%), Postives = 36/39 (92.31%), Query Frame = 0

Query:   18 QKKRRAQPGDFEKQVDRIRRDISTIRSNLAAAEKALDVT 56
            Q+K+RAQPGDFE+QV++IR DI T+RSNLA A+KALD++
Sbjct:   17 QEKKRAQPGDFERQVEQIRTDIKTVRSNLAEAQKALDMS 55

The following BLAST results are available for this feature:

BLAST of Gcaud10091.t1 vs. uniprot

BLAST of Gcaud10091.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IQ12_9FLOR	3.550e-17	59.72	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QKY2_CHOCR	3.240e-9	69.23	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 32..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..80

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_1312_length_11502_cov_6.634563	contig	NODE_1312_length_11502_cov_6.634563:1470..1853 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud10091.t1	Gcaud10091.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_1312_length_11502_cov_6.634563 1470..1853 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud10091.t1 ID=Gcaud10091.t1|Name=Gcaud10091.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=81bp
MKGAADKNLKEDAKPASQKKRRAQPGDFEKQVDRIRRDISTIRSNLAAAE
KALDVTGVPYDAPPEQVTDKKDDAETHQQT*