Gcaud10012.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud10012.t1
Unique NameGcaud10012.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length324
Homology
BLAST of Gcaud10012.t1 vs. uniprot
Match: A0A2V3IMV5_9FLOR (Protein LAS1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMV5_9FLOR)

HSP 1 Score: 298 bits (763), Expect = 1.130e-96
Identity = 167/319 (52.35%), Postives = 211/319 (66.14%), Query Frame = 0
Query:    1 MLTIGDIAQAKARVALYQIRRRGSVPISVLSSVALASQLKNPSPDQYSQRSSLSMTITRLVNGLTDRLQPRGDGASARSVHKLALELGLPPTLVDIRHQSCHNLLPRLSALESGAKQALLWLEQFYWKPQHSSLTYQLPRSFVDVMKVFENPERTRDGEALEPANVLLE-----GSDVESQNTNPVVHKMRQIANRLEDTQKRSVGRVAIVKKRS--GGKRWRRCENSDAWKNLSLGLIPGQKKPPPLRKIDMCSGESFRTEQNPNDAPHDELVPSELRDGGKAYIPNEESYRPQVRNLTTEEVKKIASLTNHFESLVS 312
            MLT GD+ QA ARVALYQIRRR SVPISVL+SV LA QLKNPSPD ++QR SLSM ITR VNGLTDR QPRG GASARSVH LA+ LGLP  LVDIRHQSCHNLLPRL+ALESGAKQAL+WLEQ YW+PQH S+  QLP  + ++ +V E+ + + D   +E A +  +      SD  + +T  ++ KM++ A RLE+ Q+++     I+ KR   G KRWRRC NS+AWK + LGLIPGQ++PP L+     SG    T +    +   E    E  D        E+  +  VR LT E+ +++    NHF  L+S
Sbjct:   25 MLTAGDVEQASARVALYQIRRRSSVPISVLTSVTLARQLKNPSPDTFTQRLSLSMAITRFVNGLTDRFQPRGQGASARSVHTLAVGLGLPLILVDIRHQSCHNLLPRLTALESGAKQALVWLEQHYWEPQHRSIALQLPEEYRELKEVIES-DASLD---VEKAGLWFQTASERSSDSANDSTAILLSKMKEAAERLEEKQRKATTEPRIISKRPRPGTKRWRRCTNSEAWKTVPLGLIPGQERPPRLKVHKPNSGFRAHTTKTTGTSLVQENGELETPDMPAIESMGEKPVQSHVRRLTEEDDERVTHFVNHFRGLIS 339          
BLAST of Gcaud10012.t1 vs. uniprot
Match: A0A0L6V965_9BASI (Uncharacterized protein n=1 Tax=Puccinia sorghi TaxID=27349 RepID=A0A0L6V965_9BASI)

HSP 1 Score: 89.7 bits (221), Expect = 2.610e-16
Identity = 52/133 (39.10%), Postives = 79/133 (59.40%), Query Frame = 0
Query:   17 YQIRRRGSVPISVLSSVALASQLKNPSPDQYSQRSSLSMTITRLVNGLTDRLQPRGDGASARSVHKLALELGLPPTLVDIRHQSCHNLLPRLSALESGAKQALLWLEQFYWKPQHSSL--TYQLPRSFVDVMK 147
            + IR   S+P ++ ++ AL S +  P P+   QR +LSM ++R+VN L D LQ    G  ARS+ ++A ELGLP TLV +RH++ H  LP L+ L   A  AL WL   YW P+ + +  T +L +  +D ++
Sbjct:   44 WSIRSPSSLPPAIEATHALLSLILPPIPNVQQQRLALSMALSRMVNSLVDPLQ---KGMYARSIAQIAAELGLPLTLVQLRHRATHEDLPSLTVLLESANLALDWLYTHYWLPRLNDIEGTGKLKQEMIDALE 173          
BLAST of Gcaud10012.t1 vs. uniprot
Match: A0A5B8MU70_9CHLO (Ribosomal biogenesis protein LAS1 n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MU70_9CHLO)

HSP 1 Score: 89.7 bits (221), Expect = 2.620e-16
Identity = 53/121 (43.80%), Postives = 75/121 (61.98%), Query Frame = 0
Query:   20 RRRGSVPISV-LSSVALASQLKNPSPDQYSQ--RSSLSMTITRLVNGLTDRLQPRGDGASARSVHKLALELGLPPTLVDIRHQSCHNLLPRLSALESGAKQALLWLEQFYWKPQHSSLTYQ 137
            R RG VP++V +++  +  +L++   D  S   R +LSMT+TRLVNG++  LQ    G  A+SV  LA  +GLP  LVD+RH++ HN LP +S L   A+QAL+WL   YW+ Q   L  Q
Sbjct:   75 RARGRVPMAVGVTADIVQIKLRSCGGDHSSHVNRLALSMTLTRLVNGVSGELQ---KGVYAKSVANLAESVGLPRILVDLRHEATHNALPSMSVLSIAAEQALVWLRDNYWRRQAGELEEQ 192          
BLAST of Gcaud10012.t1 vs. uniprot
Match: A0A0H5RDE0_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RDE0_9EUKA)

HSP 1 Score: 84.7 bits (208), Expect = 1.290e-14
Identity = 48/117 (41.03%), Postives = 67/117 (57.26%), Query Frame = 0
Query:   20 RRRGSVPISVLSSVALASQLKNPSP-DQYSQRSSLSMTITRLVNGLTDRLQPRGDGASARSVHKLALELGLPPTLVDIRHQSCHNLLPRLSALESGAKQALLWLEQFYWKPQHSSLT 135
            RRRGSVPISV  + +L   L N        QR ++SM ITRLVNG+ D+LQ       ARS+  +A ++ +P   V++RH + HN LP L  L     +AL W+ + YWK + +  T
Sbjct:   49 RRRGSVPISVDITGSLLESLVNEKRLSSNQQRLAISMAITRLVNGIADKLQ---TSLFARSIRDIARDIDMPVVFVEVRHLATHNDLPSLPLLIETRSRALSWIRERYWKAESNHFT 162          
BLAST of Gcaud10012.t1 vs. uniprot
Match: A0A2N5TSQ0_9BASI (Uncharacterized protein n=2 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5TSQ0_9BASI)

HSP 1 Score: 84.3 bits (207), Expect = 1.760e-14
Identity = 47/114 (41.23%), Postives = 67/114 (58.77%), Query Frame = 0
Query:   17 YQIRRRGSVPISVLSSVALASQLKNPSPDQYSQRSSLSMTITRLVNGLTDRLQPRGDGASARSVHKLALELGLPPTLVDIRHQSCHNLLPRLSALESGAKQALLWLEQFYWKPQ 130
            + IR   ++P ++ ++ AL + L  P+P Q  QR  L+M I RLVN L D   P   G  ARS+ ++A +LGLP +LV +RH++ H  LP L+ L   A  AL WL   YW P+
Sbjct:   40 WAIRSPATLPPAIEATHALLALLLPPTPSQQQQRLGLAMGIARLVNSLVD---PEQKGLYARSISQIASQLGLPLSLVQLRHRATHEHLPSLTILLESANLALDWLYAHYWLPR 150          
BLAST of Gcaud10012.t1 vs. uniprot
Match: T0R2P0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R2P0_SAPDV)

HSP 1 Score: 77.8 bits (190), Expect = 2.920e-12
Identity = 53/148 (35.81%), Postives = 72/148 (48.65%), Query Frame = 0
Query:    5 GDIAQAKARVALYQIRRRGSVPISVLSSVALAS--------QLKNPSPDQYSQRSSLSM----TITRLVNGLTDRLQPRGDGASARSVHKLALELGLPPTLVDIRHQSCHNLLPRLSALESGAKQALLWLEQFYWKPQHSSLTYQLPR 140
            GD  +  AR+A +  R R  VPI++  +  LA          L  P    Y     L +    TI R VNGL D  Q    GA A  V  LA+ +G+P  +VDIRH+S H  LP L  L+  A+    WL + YW+PQ +S   ++ R
Sbjct:   59 GDKLRGLARIAAW--RARSDVPIAIEVTAQLAEISCHDGAYGLATPGRSMYRSYEELRLLYAATILRCVNGLVDASQ---KGAYAMPVSTLAMRIGIPLWVVDIRHESAHTKLPALPTLQLAAQTLWKWLFEHYWQPQEASFLDRVAR 201          
BLAST of Gcaud10012.t1 vs. uniprot
Match: A0A1Y3NBS5_PIRSE (Uncharacterized protein n=2 Tax=Piromyces TaxID=4821 RepID=A0A1Y3NBS5_PIRSE)

HSP 1 Score: 77.0 bits (188), Expect = 3.250e-12
Identity = 39/77 (50.65%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   54 SMTITRLVNGLTDRLQPRGDGASARSVHKLALELGLPPTLVDIRHQSCHNLLPRLSALESGAKQALLWLEQFYWKPQ 130
            +MT  R VNG+ D LQ    GA A S+  LA +LGLP   VD+RH+  H+ LP L  L +G KQAL WL  FYW  Q
Sbjct:   99 TMTFIRFVNGIIDPLQ---KGAYAVSISSLAEQLGLPQWFVDLRHEGTHDQLPSLKVLRNGCKQALDWLNNFYWMKQ 172          
BLAST of Gcaud10012.t1 vs. uniprot
Match: A0A485L660_9STRA (Aste57867_16392 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L660_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 4.150e-12
Identity = 53/161 (32.92%), Postives = 76/161 (47.20%), Query Frame = 0
Query:   20 RRRGSVPISVLSSVALAS--------QLKNPSPDQYSQRSSL----SMTITRLVNGLTDRLQPRGDGASARSVHKLALELGLPPTLVDIRHQSCHNLLPRLSALESGAKQALLWLEQFYWKPQHSSLTYQLPRSFVDVMKVFENPERTRDGEALEPANVLL 168
            R R  VP+++  +  LA          L  P    Y     L    S T+ R VNGL D  Q    GA A++V  LA+ +G+P  +VDIRH++ H  LP L  L+  A+    WL + YW+PQ S++  ++ R    +          R  +A EP N LL
Sbjct:   85 RARSDVPVAIEVTAHLAEISCHDNVLGLATPGRSMYRSHEELRLLYSATVVRCVNGLVDASQ---RGAYAQAVSALAMRIGIPLWIVDIRHEAAHTKLPSLPTLQLAAQTLRQWLFEHYWQPQDSAIKARVARVGTAL---------ARRVDAAEPLNTLL 233          
BLAST of Gcaud10012.t1 vs. uniprot
Match: A0A7J6WLV0_THATH (Las1-like family protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6WLV0_THATH)

HSP 1 Score: 77.4 bits (189), Expect = 4.860e-12
Identity = 48/152 (31.58%), Postives = 83/152 (54.61%), Query Frame = 0
Query:    6 DIAQAKARVALYQIRRRGSVPISVLSSVALASQLKNP------SPDQYSQRSSLSM----TITRLVNGLTDRLQPRGDGASARSVHKLALELGLPPTLVDIRHQSCHNLLPRLSALESGAKQALLWLEQFYWKPQHSSLTYQLPRSFVDVMK 147
             IA A AR++ +QIR    + I V +++ + +Q K+P      + D       L+M     I RLVNG+ D+ + + D     S+ + A +LGLPP L+DIRH++ H  LP L  +   + + L W++  YW+PQ   +++   ++ VD ++
Sbjct:   51 SIAAALARISAWQIRGCTPIQIEVAANI-IETQQKDPVFRKDLNKDVSISEELLAMLYSTAIIRLVNGIVDKGRKKED----ISIAERAAQLGLPPMLIDIRHEASHRDLPSLQLVRVASVEVLDWIKSTYWEPQKKKVSFSFHKNKVDYVR 197          
BLAST of Gcaud10012.t1 vs. uniprot
Match: A0A1Y1X7H1_9FUNG (Las1-domain-containing protein (Fragment) n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1X7H1_9FUNG)

HSP 1 Score: 77.0 bits (188), Expect = 5.670e-12
Identity = 39/77 (50.65%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   54 SMTITRLVNGLTDRLQPRGDGASARSVHKLALELGLPPTLVDIRHQSCHNLLPRLSALESGAKQALLWLEQFYWKPQ 130
            +MT  R VNG+ D LQ    GA A S+  LA +LGLP   VD+RH+  H+ LP L  L +G KQAL WL  FYW  Q
Sbjct:   99 TMTFIRFVNGIIDPLQ---KGAYAVSISSLAEQLGLPQWFVDLRHEGTHDQLPSLKVLRNGCKQALDWLNNFYWMKQ 172          
The following BLAST results are available for this feature:
BLAST of Gcaud10012.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMV5_9FLOR1.130e-9652.35Protein LAS1 n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
A0A0L6V965_9BASI2.610e-1639.10Uncharacterized protein n=1 Tax=Puccinia sorghi Ta... [more]
A0A5B8MU70_9CHLO2.620e-1643.80Ribosomal biogenesis protein LAS1 n=2 Tax=Chloropi... [more]
A0A0H5RDE0_9EUKA1.290e-1441.03Uncharacterized protein (Fragment) n=1 Tax=Spongos... [more]
A0A2N5TSQ0_9BASI1.760e-1441.23Uncharacterized protein n=2 Tax=Puccinia coronata ... [more]
T0R2P0_SAPDV2.920e-1235.81Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1Y3NBS5_PIRSE3.250e-1250.65Uncharacterized protein n=2 Tax=Piromyces TaxID=48... [more]
A0A485L660_9STRA4.150e-1232.92Aste57867_16392 protein n=1 Tax=Aphanomyces stella... [more]
A0A7J6WLV0_THATH4.860e-1231.58Las1-like family protein n=1 Tax=Thalictrum thalic... [more]
A0A1Y1X7H1_9FUNG5.670e-1250.65Las1-domain-containing protein (Fragment) n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007174Las1PFAMPF04031Las1coord: 8..128
e-value: 2.2E-26
score: 92.7
IPR007174Las1PANTHERPTHR15002UNCHARACTERIZEDcoord: 8..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_32_length_72862_cov_4.436877contigNODE_32_length_72862_cov_4.436877:4138..5109 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud10012.t1Gcaud10012.t1Gracilaria caudata M_176_S67 malemRNANODE_32_length_72862_cov_4.436877 4138..5109 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud10012.t1 ID=Gcaud10012.t1|Name=Gcaud10012.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=324bp
MLTIGDIAQAKARVALYQIRRRGSVPISVLSSVALASQLKNPSPDQYSQR
SSLSMTITRLVNGLTDRLQPRGDGASARSVHKLALELGLPPTLVDIRHQS
CHNLLPRLSALESGAKQALLWLEQFYWKPQHSSLTYQLPRSFVDVMKVFE
NPERTRDGEALEPANVLLEGSDVESQNTNPVVHKMRQIANRLEDTQKRSV
GRVAIVKKRSGGKRWRRCENSDAWKNLSLGLIPGQKKPPPLRKIDMCSGE
SFRTEQNPNDAPHDELVPSELRDGGKAYIPNEESYRPQVRNLTTEEVKKI
ASLTNHFESLVSEQSANSTICRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007174Las1