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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Gcaud8241.t1.start1 | Gcaud8241.t1.start1 | Gracilaria caudata M_176_S67 male | start_codon | NODE_308_length_31041_cov_4.463651 7893..7895 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Gcaud8241.t1.stop1 | Gcaud8241.t1.stop1 | Gracilaria caudata M_176_S67 male | stop_codon | NODE_308_length_31041_cov_4.463651 8838..8840 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gcaud8241.t1 ID=Gcaud8241.t1|Name=Gcaud8241.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=316bp
MESMRAGSSPSLSPRHSDTSLNSVPTPFSACEQPPQPLPAHASTSTISRS
SHASNDDPFLHPPSFTRLPKAKVFVRREPSRIVNRDRPLPPPKKPADQRC
VSDIHDVYRVTQRTQPLTDVTATKNDRVRTDLHALVDQLPDAKQVPQWIP
SDERRDWHAQYAFDPCEVEEDSHPSSRWATSLRNLANMYKPKPSKTPDVR
GSVLQVQPPTLGERLGISSKGDKRRHASKLSQPTQQSPTCHNAPPATSRC
KKRQNEPRLARSRARDTQQQQPEQMSWYADDYVGFLEKPSARLLCQRYRH
SWFRFLRRGRAARRS* back to topspliced messenger RNA >Gcaud8241.t1 ID=Gcaud8241.t1|Name=Gcaud8241.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=948bp|location=Sequence derived from alignment at NODE_308_length_31041_cov_4.463651:7893..8840+ (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGAGTCGATGAGGGCGGGTTCTTCGCCTTCGCTATCACCGCGTCATTC
GGACACTTCGCTCAATAGCGTGCCCACACCGTTCTCGGCTTGTGAGCAGC
CGCCGCAACCGCTACCTGCGCATGCCAGCACCAGCACCATTTCTCGTTCC
AGTCACGCCAGTAATGATGATCCTTTCCTGCATCCGCCGTCGTTCACACG
TCTTCCCAAGGCCAAGGTCTTTGTTCGCCGAGAACCGAGTCGAATAGTCA
ATCGCGACCGCCCATTGCCACCGCCGAAGAAGCCGGCCGACCAGCGTTGT
GTATCGGACATTCACGACGTGTACCGTGTTACCCAGCGCACCCAACCGCT
CACAGACGTTACTGCAACCAAAAACGACCGAGTGCGAACCGACTTGCACG
CTCTCGTCGATCAATTGCCGGATGCCAAACAAGTACCGCAATGGATTCCG
TCCGATGAGAGAAGAGACTGGCACGCCCAATATGCCTTCGACCCGTGTGA
AGTGGAAGAAGACAGCCACCCCTCAAGCCGATGGGCAACCAGTCTAAGAA
ACCTAGCAAACATGTACAAACCAAAGCCCTCAAAAACGCCGGACGTCCGA
GGTTCCGTTCTGCAGGTACAGCCGCCAACTCTAGGAGAACGTCTAGGAAT
TTCCTCCAAGGGCGACAAACGCCGTCACGCCTCAAAGCTCTCTCAACCCA
CACAACAGTCACCCACATGTCACAACGCCCCGCCTGCCACAAGCCGTTGC
AAGAAGAGACAAAACGAACCACGGCTCGCTCGGTCTCGGGCGCGCGACAC
CCAACAGCAACAACCGGAGCAGATGAGCTGGTATGCAGACGACTACGTGG
GCTTTCTGGAGAAGCCGTCTGCGCGCCTGTTGTGTCAACGGTATCGGCAC
TCGTGGTTTCGTTTCCTTCGGCGCGGTCGCGCCGCTCGGCGTTCGTAG back to topprotein sequence of Gcaud8241.t1 >Gcaud8241.t1 ID=Gcaud8241.t1|Name=Gcaud8241.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=316bp
MESMRAGSSPSLSPRHSDTSLNSVPTPFSACEQPPQPLPAHASTSTISRS
SHASNDDPFLHPPSFTRLPKAKVFVRREPSRIVNRDRPLPPPKKPADQRC
VSDIHDVYRVTQRTQPLTDVTATKNDRVRTDLHALVDQLPDAKQVPQWIP
SDERRDWHAQYAFDPCEVEEDSHPSSRWATSLRNLANMYKPKPSKTPDVR
GSVLQVQPPTLGERLGISSKGDKRRHASKLSQPTQQSPTCHNAPPATSRC
KKRQNEPRLARSRARDTQQQQPEQMSWYADDYVGFLEKPSARLLCQRYRH
SWFRFLRRGRAARRS* back to topmRNA from alignment at NODE_308_length_31041_cov_4.463651:7893..8840+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gcaud8241.t1 ID=Gcaud8241.t1|Name=Gcaud8241.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=948bp|location=Sequence derived from alignment at NODE_308_length_31041_cov_4.463651:7893..8840+ (Gracilaria caudata M_176_S67 male)
ATGGAGTCGATGAGGGCGGGTTCTTCGCCTTCGCTATCACCGCGTCATTC
GGACACTTCGCTCAATAGCGTGCCCACACCGTTCTCGGCTTGTGAGCAGC
CGCCGCAACCGCTACCTGCGCATGCCAGCACCAGCACCATTTCTCGTTCC
AGTCACGCCAGTAATGATGATCCTTTCCTGCATCCGCCGTCGTTCACACG
TCTTCCCAAGGCCAAGGTCTTTGTTCGCCGAGAACCGAGTCGAATAGTCA
ATCGCGACCGCCCATTGCCACCGCCGAAGAAGCCGGCCGACCAGCGTTGT
GTATCGGACATTCACGACGTGTACCGTGTTACCCAGCGCACCCAACCGCT
CACAGACGTTACTGCAACCAAAAACGACCGAGTGCGAACCGACTTGCACG
CTCTCGTCGATCAATTGCCGGATGCCAAACAAGTACCGCAATGGATTCCG
TCCGATGAGAGAAGAGACTGGCACGCCCAATATGCCTTCGACCCGTGTGA
AGTGGAAGAAGACAGCCACCCCTCAAGCCGATGGGCAACCAGTCTAAGAA
ACCTAGCAAACATGTACAAACCAAAGCCCTCAAAAACGCCGGACGTCCGA
GGTTCCGTTCTGCAGGTACAGCCGCCAACTCTAGGAGAACGTCTAGGAAT
TTCCTCCAAGGGCGACAAACGCCGTCACGCCTCAAAGCTCTCTCAACCCA
CACAACAGTCACCCACATGTCACAACGCCCCGCCTGCCACAAGCCGTTGC
AAGAAGAGACAAAACGAACCACGGCTCGCTCGGTCTCGGGCGCGCGACAC
CCAACAGCAACAACCGGAGCAGATGAGCTGGTATGCAGACGACTACGTGG
GCTTTCTGGAGAAGCCGTCTGCGCGCCTGTTGTGTCAACGGTATCGGCAC
TCGTGGTTTCGTTTCCTTCGGCGCGGTCGCGCCGCTCGGCGTTCGTAG back to topCoding sequence (CDS) from alignment at NODE_308_length_31041_cov_4.463651:7893..8840+ >Gcaud8241.t1 ID=Gcaud8241.t1|Name=Gcaud8241.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=948bp|location=Sequence derived from alignment at NODE_308_length_31041_cov_4.463651:7893..8840+ (Gracilaria caudata M_176_S67 male)
ATGGAGTCGATGAGGGCGGGTTCTTCGCCTTCGCTATCACCGCGTCATTC
GGACACTTCGCTCAATAGCGTGCCCACACCGTTCTCGGCTTGTGAGCAGC
CGCCGCAACCGCTACCTGCGCATGCCAGCACCAGCACCATTTCTCGTTCC
AGTCACGCCAGTAATGATGATCCTTTCCTGCATCCGCCGTCGTTCACACG
TCTTCCCAAGGCCAAGGTCTTTGTTCGCCGAGAACCGAGTCGAATAGTCA
ATCGCGACCGCCCATTGCCACCGCCGAAGAAGCCGGCCGACCAGCGTTGT
GTATCGGACATTCACGACGTGTACCGTGTTACCCAGCGCACCCAACCGCT
CACAGACGTTACTGCAACCAAAAACGACCGAGTGCGAACCGACTTGCACG
CTCTCGTCGATCAATTGCCGGATGCCAAACAAGTACCGCAATGGATTCCG
TCCGATGAGAGAAGAGACTGGCACGCCCAATATGCCTTCGACCCGTGTGA
AGTGGAAGAAGACAGCCACCCCTCAAGCCGATGGGCAACCAGTCTAAGAA
ACCTAGCAAACATGTACAAACCAAAGCCCTCAAAAACGCCGGACGTCCGA
GGTTCCGTTCTGCAGGTACAGCCGCCAACTCTAGGAGAACGTCTAGGAAT
TTCCTCCAAGGGCGACAAACGCCGTCACGCCTCAAAGCTCTCTCAACCCA
CACAACAGTCACCCACATGTCACAACGCCCCGCCTGCCACAAGCCGTTGC
AAGAAGAGACAAAACGAACCACGGCTCGCTCGGTCTCGGGCGCGCGACAC
CCAACAGCAACAACCGGAGCAGATGAGCTGGTATGCAGACGACTACGTGG
GCTTTCTGGAGAAGCCGTCTGCGCGCCTGTTGTGTCAACGGTATCGGCAC
TCGTGGTTTCGTTTCCTTCGGCGCGGTCGCGCCGCTCGGCGTTCGTAG back to top
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