prot_F-serratus_M_contig1043.442.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1043.442.1
Unique Nameprot_F-serratus_M_contig1043.442.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length331
Homology
BLAST of mRNA_F-serratus_M_contig1043.442.1 vs. uniprot
Match: D8LHH2_ECTSI (CPLD51 protein required for cyt b6 assembly n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHH2_ECTSI)

HSP 1 Score: 356 bits (913), Expect = 2.130e-119
Identity = 183/231 (79.22%), Postives = 205/231 (88.74%), Query Frame = 0
Query:   83 MFSPAEVTDATLTAREAISASLPSVLLGEEA------SIGYSKFSYYTTLGLYALSFPGLWSVVKRATKTKYKDATYEIPGPASSEEGAESVKQTAAKIIAYFQANNYRILNAGEEITFEGAVEANRGQAFFLVFCTALSFATLALVLQIQFPAIGNYWFLLTLLSPYAGVYYWQNASRSEKAKVRLETSEDDMMTELYITGAEEELDRLSKTMGFMEKGKIRIKGFLEQE 307
            + +P EV DA + A  A+SA LPS LL +EA      S+GYSKFSYYTTLGLY LSFPGLWSVVKRATKTKYKDATYE+PGPAS+E+GAESVKQTAAKIIAYFQANNY+I  AGE ITFEGA++A++GQAFFLVFCTALSFATLALVLQIQFPAIGNYWFLLTLLSPYAGVYYWQN SR++KA+VRLETS+DD +TE+YITGA EELDRLSKTMG+MEKG IR+KG LE E
Sbjct:   76 VVAPHEVVDAAVAAHHAVSA-LPSFLLSDEAVAEAAGSVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESVKQTAAKIIAYFQANNYKIKEAGETITFEGAIQASKGQAFFLVFCTALSFATLALVLQIQFPAIGNYWFLLTLLSPYAGVYYWQNGSRNDKAQVRLETSDDDTLTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLEGE 305          
BLAST of mRNA_F-serratus_M_contig1043.442.1 vs. uniprot
Match: A0A835YMB8_9STRA (CPLD51 protein required for cyt b6 assembly n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMB8_9STRA)

HSP 1 Score: 270 bits (690), Expect = 2.160e-86
Identity = 130/194 (67.01%), Postives = 158/194 (81.44%), Query Frame = 0
Query:  113 ASIGYSKFSYYTTLGLYALSFPGLWSVVKRATKTKYKDATYEIPGPASSEEGAESVKQTAAKIIAYFQANNYRILNAGEEITFEGAVEANRGQAFFLVFCTALSFATLALVLQIQFPAIGNYWFLLTLLSPYAGVYYWQNASRSEKAKVRLETSEDDMMTELYITGAEEELDRLSKTMGFMEKGKIRIKGFLEQ 306
            AS+ YSK SYY TLGLY LSFPGLWSV+KRA KTKYK+  Y + GPA++   A+ VKQ AA+++AYFQANNY+I++AGEEI FEGAV+A+R Q FFLVFCT L   TL+LVLQIQFP  G YW+LLTLLSPYAGVYYW NA R +KA+VRLET++DD   E+ IT  EEELDR++KTMG+ +KG IR+KG LE+
Sbjct:   85 ASVSYSKSSYYATLGLYLLSFPGLWSVIKRAAKTKYKERVYTVAGPAAAV-AAKPVKQVAAEVVAYFQANNYKIVSAGEEIVFEGAVQASRSQGFFLVFCTFLCLGTLSLVLQIQFPDFGTYWYLLTLLSPYAGVYYWNNAQRKDKAQVRLETTDDDTTVEIRITAGEEELDRMAKTMGYQQKGMIRVKGILEE 277          
BLAST of mRNA_F-serratus_M_contig1043.442.1 vs. uniprot
Match: A0A7S3XQU3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQU3_HETAK)

HSP 1 Score: 213 bits (542), Expect = 1.940e-63
Identity = 110/226 (48.67%), Postives = 150/226 (66.37%), Query Frame = 0
Query:  106 SVLLGEEASIGYSKFSYYTTLGLYALSFPGLWSVVKRATKTKYKDATYEIPGPASSEEGAESVKQTAAK-------------------IIAYFQANNYRILNAGEEITFEGAVEANRGQAFFLVFCTALSFATLALVLQIQFPAIGNYWFLLTLLSPYAGVYYWQNASRSEKAKVRLETSEDDMMTELYITGAEEELDRLSKTMGFMEKGKIRIKGFLEQEPAEVP 312
            S L+ EEA+  YSK SYYTTLGLY +SFPGL+S+VKR+ K      TYE+PGP S++ GA+ +KQ AA+                   ++AYF+A NY I+NAGE I+F+G +  +  QAFFL FCT +   +LALVL IQF  IG  +F +TLL+PYAGVYYW+NA R E A+V+LE ++D+   +L I   +EEL+R ++TM + EKG +R+KG  E E  + P
Sbjct:   70 SNLIAEEATTSYSKASYYTTLGLYVISFPGLYSLVKRSVKASNVKKTYELPGP-SADTGAKEMKQIAAEAVREAYLPIIEAAAKQLKQVVAYFRAQNYEIVNAGETISFKGTLSKSSSQAFFLTFCTFIGLGSLALVLSIQFQEIGQNFFWMTLLAPYAGVYYWKNADREETAEVKLEIADDERTVDLVIAAGKEELERFARTMDYCEKGMVRVKGIFEGEEMDAP 294          
BLAST of mRNA_F-serratus_M_contig1043.442.1 vs. uniprot
Match: A0A7S2RI62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RI62_9STRA)

HSP 1 Score: 208 bits (529), Expect = 8.310e-62
Identity = 103/194 (53.09%), Postives = 137/194 (70.62%), Query Frame = 0
Query:  118 SKFSYYTTLGLYALSFPGLWSVVKRATKTKYKDATYEIPGPASSEEGAESVKQTAAKIIAYFQANNYRILNAGEEITFEGAVEANRGQAFFLVFCTALSFATLALVLQIQFPAIG-----NYWFLLTLLSPYAGVYYWQNASRSEKAKVRLETSEDDMMTELYITGAEEELDRLSKTMGFMEKGKIRIKGFLEQ 306
            S  S Y TL LY +SFPGL+S+VKRATK K +  TYE+PGP    EGA  ++  AA+I AYFQANNY++++A + I F+G +E ++ QAFFL FCT + F TLAL+L IQ P IG     NYWFL  L +PYAGVYYWQNA   ++ +VRL+TS+D+  TE+ +   +EELD+ +  M + EKGKIR++G  EQ
Sbjct:   94 SYASLYATLALYLISFPGLFSLVKRATKVKPEQRTYEMPGPGV--EGAMPLRNVAAEIFAYFQANNYKVIDAADTIVFKGVLEKSKSQAFFLSFCTLVGFGTLALILSIQVPKIGPLEIGNYWFLSCLSAPYAGVYYWQNAQNEDEVRVRLQTSDDERKTEVIVQAGKEELDKFASVMNYDEKGKIRVRGIFEQ 285          
BLAST of mRNA_F-serratus_M_contig1043.442.1 vs. uniprot
Match: B8LDY3_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LDY3_THAPS)

HSP 1 Score: 202 bits (515), Expect = 2.900e-61
Identity = 100/188 (53.19%), Postives = 132/188 (70.21%), Query Frame = 0
Query:  117 YSKFSYYTTLGLYALSFPGLWSVVKRATKTKYKDATYEIPGPASSEEGAESVKQTAAKIIAYFQANNYRILNAGEEITFEGAVEANRGQAFFLVFCTALSFATLALVLQIQFPAIGNYWFLLTLLSPYAGVYYWQNASRSEKAKVRLETSEDDMMTELYITGAEEELDRLSKTMGFMEKGKIRIKGFL 304
            YSK SYYTTL LYA SFPGLWS +KR+TK K K  TY   G A+  EG + ++Q A +I+AY +ANNY +  AGE ITF G V  +  QAFFL FCTAL  A+LALVLQIQF  +   WF LTLLSPYAG+YYW++  R +  KV+L  ++DD + E+ I G +EE++R+ +T+   EKG ++++G L
Sbjct:    1 YSKASYYTTLALYAASFPGLWSQIKRSTKAKVKRKTYVSAGEAA--EGGKELRQQAGEIMAYMKANNYEVAEAGETITFRGLVARSTSQAFFLTFCTALGMASLALVLQIQFQDVDFNWFYLTLLSPYAGIYYWRSGDRVDDMKVKLAANDDDTLNEITIEGNDEEIERMWRTLDLQEKGMVKVEGIL 186          
BLAST of mRNA_F-serratus_M_contig1043.442.1 vs. uniprot
Match: K0SQW6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQW6_THAOC)

HSP 1 Score: 205 bits (521), Expect = 8.690e-61
Identity = 108/219 (49.32%), Postives = 153/219 (69.86%), Query Frame = 0
Query:   90 TDATLTAREAISASLPSVLLGEEASIGYSKFSYYTTLGLYALSFPGLWSVVKRATKTKYKDATYEIPGPASSEEGAESVKQTAAKIIAYFQANNYRILNAGEEITFEGAVEANRGQAFFLVFCTALSFATLALVLQIQF-----PAIGN-YWFLLTLLSPYAGVYYWQNASRSEKAKVRLETSEDDMMTELYITGAEEELDRLSKTMGFMEKGKIRIKG 302
            T A+++++++++    SV   E  +  YSK SYYTTL LYA SFPGLWS VKR+TK K K  TY  PG   + EG ++ +Q A +I+AY +ANNY + +AGE+I F+G V+ ++ QAFFL FCTAL  A+LALVLQIQF     P IG   WFLLTLLSPYAG+YYW++  R +  +V+L +++DD M E+ + G +EE+DR+ + +   EKG +R++G
Sbjct:   69 TVASVSSQDSVAEVTSSVAQPEGFTPSYSKASYYTTLALYAASFPGLWSQVKRSTKAKIKRKTYVSPG--ENAEGGKTQRQQAGEIMAYMKANNYEVADAGEKIIFKGLVQQSKSQAFFLTFCTALGMASLALVLQIQFQDLELPVIGKPNWFLLTLLSPYAGIYYWRSGDRVDDFEVKLSSNDDDTMNEITVQGNDEEIDRMWRALELQEKGMVRVEG 285          
BLAST of mRNA_F-serratus_M_contig1043.442.1 vs. uniprot
Match: A0A7S1VVB4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VVB4_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.490e-60
Identity = 105/197 (53.30%), Postives = 139/197 (70.56%), Query Frame = 0
Query:  115 IGYSKFSYYTTLGLYALSFPGLWSVVKRATKTKYKDATYEIPGPASSEEGAESVKQTAAKIIAYFQANNYRILNAGEEITFEGAVEANRGQAFFLVFCTALSFATLALVLQIQF-----PAIGN-YWFLLTLLSPYAGVYYWQNASRSEKAKVRLETSEDDMMTELYITGAEEELDRLSKTMGFMEKGKIRIKGFLE 305
            IGYSK SYYT LGLYA+SFPGLWS +KR+T  K K  TY  PG  + E   + ++Q A +I+AY +ANNY ++NAGE ITF G V+ +  QAFFLVFCTAL  A+LALVL IQF     P IG   W+ L LLSPYAGVYYW+   R +  +V+L  ++DD   E+ + G+EEEL+R+ +T+G+ EKG I+++G L+
Sbjct:   64 IGYSKISYYTILGLYAMSFPGLWSQIKRSTTAKVKRKTYISPGENAPE--GKDLRQQAGEIMAYMKANNYDVVNAGETITFRGLVQRSVSQAFFLVFCTALGMASLALVLDIQFQDAVLPMIGKPNWYFLVLLSPYAGVYYWKAGDRVDDCEVKLTANDDDTENEIAVQGSEEELERMWRTLGWQEKGMIKVEGVLD 258          
BLAST of mRNA_F-serratus_M_contig1043.442.1 vs. uniprot
Match: A0A7R9ZEM2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZEM2_9STRA)

HSP 1 Score: 201 bits (510), Expect = 4.710e-60
Identity = 100/195 (51.28%), Postives = 140/195 (71.79%), Query Frame = 0
Query:  117 YSKFSYYTTLGLYALSFPGLWSVVKRATKTKYKDATYEIPGPASSEEGAESVKQTAAKIIAYFQANNYRILNAGEEITFEGAVEANRGQAFFLVFCTALSFATLALVLQIQF-----PAIGN-YWFLLTLLSPYAGVYYWQNASRSEKAKVRLETSEDDMMTELYITGAEEELDRLSKTMGFMEKGKIRIKGFLE 305
            YSK+S+YTTLG+Y +SFPGLWS +KR+TK K K  TY   G   + EG + ++Q A +I+AY +ANNY +  AGE ITF+G V+ +  QAFFLVFCTAL  A+LALVLQIQF     PAIG   W+ L LLSPYAG+YYW++  R ++ KV+L T++D+ + E+ I G ++ELDR+ + +   EKG ++++G L+
Sbjct:   26 YSKWSFYTTLGVYVMSFPGLWSQIKRSTKAKVKRKTYVSDG--ENAEGGKDMRQQAGEIMAYMKANNYEVEEAGETITFKGLVQQSTSQAFFLVFCTALGLASLALVLQIQFQDLVLPAIGKPNWYYLVLLSPYAGIYYWKSGDREDEIKVKLATNDDETLNEVTIEGNDDELDRMWRALDLREKGMVKVEGLLQ 218          
BLAST of mRNA_F-serratus_M_contig1043.442.1 vs. uniprot
Match: A0A7S2B231_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B231_9STRA)

HSP 1 Score: 202 bits (514), Expect = 4.890e-60
Identity = 106/204 (51.96%), Postives = 143/204 (70.10%), Query Frame = 0
Query:  106 SVLLGEEASIGYS----KFSYYTTLGLYALSFPGLWSVVKRATKTKYKDATYEIPGPASSEEGAESVKQTAAKIIAYFQANNYRILNAGEEITFEGAVEANRGQAFFLVFCTALSFATLALVLQIQFPAIGNYWFLLTLLSPYAGVYYWQNASRSEKAKVRLETSEDDMMTELYITGAEEELDRLSKTMGFMEKGKIRIKGFLE 305
            S +L  E+S  YS      S Y TLGLY LSFPGL S+VKRATK   K  TY + GPA+  E A+S++Q AA+I+AYFQANNY++ +AGE I F+G  + +  QAFFL FCT +   +L+LVLQIQ P +G YW+L+ L SPYAGVYYWQNA + ++ +VRL+ ++DD   E+ I G +E+L+R  +T+ + EKG IR+KG  E
Sbjct:   64 SNMLLSESSADYSFQGSYASLYATLGLYLLSFPGLISLVKRATKKDIKQKTYTLAGPAA--EDAKSMRQVAAEIMAYFQANNYKVDDAGEVIVFKGVTQQSTSQAFFLSFCTLIGLGSLSLVLQIQVPQVGAYWWLMCLGSPYAGVYYWQNAQQDDEIRVRLQATDDDKECEVTIQGDKEQLERFQQTLQYNEKGMIRVKGIFE 265          
BLAST of mRNA_F-serratus_M_contig1043.442.1 vs. uniprot
Match: D8RQ05_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RQ05_SELML)

HSP 1 Score: 197 bits (501), Expect = 5.120e-59
Identity = 93/198 (46.97%), Postives = 139/198 (70.20%), Query Frame = 0
Query:  108 LLGEEASIGYSKFSYYTTLGLYALSFPGLWSVVKRATKTKYKDATYEIPGPASSEEGAESVKQTAAKIIAYFQANNYRILNAGEEITFEGAVEANRGQAFFLVFCTALSFATLALVLQIQFPAIGNYWFLLTLLSPYAGVYYWQNASRSEKAKVRLETSEDDMMTELYITGAEEELDRLSKTMGFMEKGKIRIKGFLE 305
            +  EEA  GYS  SYYT+LGL+ L+ PGLWS++KR+ K+K    TY +PGP  S+E  ++ KQ A +I ++F  NN+ I+++GE + FEG +  +RGQA F++FCT LS A+ ALVL I  P +G+ W+ LT  SP AG YYW NASR E+ +V+L  ++D+  T++ + G +E++++L K +GFMEKG + +KG L+
Sbjct:    1 MAAEEAGPGYSAASYYTSLGLFVLALPGLWSLIKRSAKSKIVRKTYVVPGP--SQESGKAPKQIAGEISSFFTRNNFTIVDSGEVVRFEGLMVPSRGQAAFIIFCTFLSLASAALVLTITVPVVGDKWYWLTAFSPLAGAYYWTNASRKEEIQVKLVVADDESSTDVLVQGDDEQIEQLRKELGFMEKGMVYVKGILQ 196          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1043.442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHH2_ECTSI2.130e-11979.22CPLD51 protein required for cyt b6 assembly n=2 Ta... [more]
A0A835YMB8_9STRA2.160e-8667.01CPLD51 protein required for cyt b6 assembly n=1 Ta... [more]
A0A7S3XQU3_HETAK1.940e-6348.67Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2RI62_9STRA8.310e-6253.09Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
B8LDY3_THAPS2.900e-6153.19Predicted protein (Fragment) n=1 Tax=Thalassiosira... [more]
K0SQW6_THAOC8.690e-6149.32Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S1VVB4_9STRA1.490e-6053.30Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7R9ZEM2_9STRA4.710e-6051.28Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2B231_9STRA4.890e-6051.96Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D8RQ05_SELML5.120e-5946.97Uncharacterized protein n=4 Tax=Selaginella moelle... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021919Cofactor assembly of complex C subunit B, CCB1PFAMPF12046CCB1coord: 121..292
e-value: 5.2E-56
score: 188.6
IPR021919Cofactor assembly of complex C subunit B, CCB1PANTHERPTHR35302FAMILY NOT NAMEDcoord: 66..306
NoneNo IPR availablePANTHERPTHR35302:SF1PROTEIN COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, CHLOROPLASTICcoord: 66..306
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 206..228
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 251..330
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 229..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..119
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 141..205
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 234..250
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.575
NoneNo IPR availableTMHMMTMhelixcoord: 121..140
NoneNo IPR availableTMHMMTMhelixcoord: 207..226
NoneNo IPR availableTMHMMTMhelixcoord: 231..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1043contigF-serratus_M_contig1043:27673..49001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1043.442.1mRNA_F-serratus_M_contig1043.442.1Fucus serratus malemRNAF-serratus_M_contig1043 27522..49794 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1043.442.1 ID=prot_F-serratus_M_contig1043.442.1|Name=mRNA_F-serratus_M_contig1043.442.1|organism=Fucus serratus male|type=polypeptide|length=331bp
MLCVRHGFTITTCLAVAAVSEGFVCTSHGAAPAPRAAGFIVGSRVRGSSV
LTVRSGQTFLSGQRAASRPNPGRRRTTRSSPAMFSPAEVTDATLTAREAI
SASLPSVLLGEEASIGYSKFSYYTTLGLYALSFPGLWSVVKRATKTKYKD
ATYEIPGPASSEEGAESVKQTAAKIIAYFQANNYRILNAGEEITFEGAVE
ANRGQAFFLVFCTALSFATLALVLQIQFPAIGNYWFLLTLLSPYAGVYYW
QNASRSEKAKVRLETSEDDMMTELYITGAEEELDRLSKTMGFMEKGKIRI
KGFLEQEPAEVPVPVPPAAVNEPAPQETEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021919CCB1