mRNA_F-serratus_M_contig1041.435.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1041.435.1 vs. uniprot
Match: D7FHG8_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG8_ECTSI) HSP 1 Score: 156 bits (394), Expect = 2.620e-47 Identity = 76/87 (87.36%), Postives = 82/87 (94.25%), Query Frame = 1 Query: 19 STPIRQSSDMSQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKHSMDKKFGASWHCAIGEGFGFGVTYQQRNMIYVFYGQIGVLTFK 279 S P+ +SSDM E+VQEAVEIVTMSVDKFINVKNYEAAAQLIK+SMDKKFGASWHCAIGEGFGF +TYQQRNMIY+FYGQIGVLTFK Sbjct: 47 SKPLIKSSDMPPEIVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYIFYGQIGVLTFK 133
BLAST of mRNA_F-serratus_M_contig1041.435.1 vs. uniprot
Match: A0A836CH10_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH10_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.670e-42 Identity = 65/87 (74.71%), Postives = 80/87 (91.95%), Query Frame = 1 Query: 19 STPIRQSSDMSQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKHSMDKKFGASWHCAIGEGFGFGVTYQQRNMIYVFYGQIGVLTFK 279 S P+ +S+DMS EM EA+E++TM+VDKFINVKNYEAAAQLIK+S+DKKFGASWHCAIGEGFGF +TYQ+RNMIY++YGQ+GVL +K Sbjct: 19 SKPVVKSADMSPEMSSEAIEVMTMAVDKFINVKNYEAAAQLIKNSLDKKFGASWHCAIGEGFGFEITYQKRNMIYMYYGQLGVLAYK 105
BLAST of mRNA_F-serratus_M_contig1041.435.1 vs. uniprot
Match: A0A812X8N6_SYMMI (Dynein light chain n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X8N6_SYMMI) HSP 1 Score: 122 bits (307), Expect = 3.700e-34 Identity = 56/82 (68.29%), Postives = 68/82 (82.93%), Query Frame = 1 Query: 34 QSSDMSQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKHSMDKKFGASWHCAIGEGFGFGVTYQQRNMIYVFYGQIGVLTFK 279 QS DMS EM E++EI+TM+VDK KNYEAAAQLIK +MDKKFGA+WHC IGEGFGF +TYQ +NM+YV+YG IG+L +K Sbjct: 45 QSVDMSMEMSMESMEIITMAVDKHQATKNYEAAAQLIKTTMDKKFGAAWHCVIGEGFGFEITYQAKNMVYVYYGSIGILAYK 126
BLAST of mRNA_F-serratus_M_contig1041.435.1 vs. uniprot
Match: G4YEJ5_PHYSP (Dynein light chain n=22 Tax=Oomycota TaxID=4762 RepID=G4YEJ5_PHYSP) HSP 1 Score: 117 bits (294), Expect = 2.130e-32 Identity = 53/87 (60.92%), Postives = 70/87 (80.46%), Query Frame = 1 Query: 19 STPIRQSSDMSQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKHSMDKKFGASWHCAIGEGFGFGVTYQQRNMIYVFYGQIGVLTFK 279 S P + +DM+ E+ E +EI+TM+ DK + VKNYEAAAQLIK SMDKKFG+SWHC IGEG+GF ++YQQR+M+Y++ G IGVL +K Sbjct: 23 SRPHLKHNDMTAEVCTETIEIITMACDKHVPVKNYEAAAQLIKQSMDKKFGSSWHCFIGEGYGFDISYQQRHMLYLYVGDIGVLVYK 109
BLAST of mRNA_F-serratus_M_contig1041.435.1 vs. uniprot
Match: A0A067BR93_SAPPC (Dynein light chain n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BR93_SAPPC) HSP 1 Score: 117 bits (294), Expect = 2.130e-32 Identity = 52/87 (59.77%), Postives = 71/87 (81.61%), Query Frame = 1 Query: 19 STPIRQSSDMSQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKHSMDKKFGASWHCAIGEGFGFGVTYQQRNMIYVFYGQIGVLTFK 279 S P + +DM+ E+ E VEI+TM+VDK + +KNYEAAAQLIK SMDKKFG+ WHC IGEG+GF ++YQQR+M+Y++ G+IG+L +K Sbjct: 23 SRPFIKHNDMTAEVCTETVEIITMAVDKHVPLKNYEAAAQLIKQSMDKKFGSFWHCFIGEGYGFDISYQQRHMLYMYVGEIGILVYK 109
BLAST of mRNA_F-serratus_M_contig1041.435.1 vs. uniprot
Match: A0A7S2FKD5_9STRA (Dynein light chain n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FKD5_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.760e-32 Identity = 50/76 (65.79%), Postives = 65/76 (85.53%), Query Frame = 1 Query: 52 QEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKHSMDKKFGASWHCAIGEGFGFGVTYQQRNMIYVFYGQIGVLTFK 279 QE VQEA+E+ TM++DKFI+ K+Y+ AA+ IK MDKKFG WHCAIGEGFGF VTYQQ+NM+Y++YGQ+G+L +K Sbjct: 31 QECVQEAIEVTTMAMDKFISKKDYDGAAKAIKDQMDKKFGTLWHCAIGEGFGFDVTYQQKNMMYIYYGQVGILIYK 106
BLAST of mRNA_F-serratus_M_contig1041.435.1 vs. uniprot
Match: A0A8K1FE69_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FE69_PYTOL) HSP 1 Score: 117 bits (292), Expect = 4.410e-32 Identity = 52/87 (59.77%), Postives = 71/87 (81.61%), Query Frame = 1 Query: 19 STPIRQSSDMSQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKHSMDKKFGASWHCAIGEGFGFGVTYQQRNMIYVFYGQIGVLTFK 279 S P + +DM+ E+ E +EI+TM+ DK + VKNYEAAAQLIK SMDKKFG+SWHC +GEG+GF V+YQQR+M++++ G+IGVL +K Sbjct: 24 SRPHLKHNDMTAEVCTETMEIITMACDKHVPVKNYEAAAQLIKQSMDKKFGSSWHCFVGEGYGFDVSYQQRHMLFIYVGEIGVLVYK 110
BLAST of mRNA_F-serratus_M_contig1041.435.1 vs. uniprot
Match: A0A0N7L6I6_PLAHL (Dynein light chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L6I6_PLAHL) HSP 1 Score: 117 bits (292), Expect = 1.000e-31 Identity = 53/87 (60.92%), Postives = 71/87 (81.61%), Query Frame = 1 Query: 19 STPIRQSSDMSQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKHSMDKKFGASWHCAIGEGFGFGVTYQQRNMIYVFYGQIGVLTFK 279 S P + +DM+ E+ E +EI+TM+ DK + +KNYEAAAQLIK SMDKKFG+SWHC IGEG+GF V+YQQR+M+Y++ G+IGVL +K Sbjct: 52 SRPHLKHNDMTAEVCTETLEIITMACDKHVPLKNYEAAAQLIKQSMDKKFGSSWHCFIGEGYGFDVSYQQRHMLYMYVGEIGVLVYK 138
BLAST of mRNA_F-serratus_M_contig1041.435.1 vs. uniprot
Match: D0NDR6_PHYIT (Dynein light chain n=5 Tax=Phytophthora TaxID=4783 RepID=D0NDR6_PHYIT) HSP 1 Score: 115 bits (289), Expect = 1.230e-31 Identity = 51/87 (58.62%), Postives = 70/87 (80.46%), Query Frame = 1 Query: 19 STPIRQSSDMSQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKHSMDKKFGASWHCAIGEGFGFGVTYQQRNMIYVFYGQIGVLTFK 279 S P + +DM+ E+ E +EI+TM+ DK + +KNYE AAQLIK SMDKKFG+SWHC IGEG+GF ++YQQR+M+Y++ G+IGVL +K Sbjct: 23 SRPHLKHNDMTAEVCTETIEIITMACDKHVPMKNYETAAQLIKQSMDKKFGSSWHCFIGEGYGFDISYQQRHMLYLYVGEIGVLVYK 109
BLAST of mRNA_F-serratus_M_contig1041.435.1 vs. uniprot
Match: A0A2D4CBJ0_PYTIN (Dynein light chain n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBJ0_PYTIN) HSP 1 Score: 115 bits (288), Expect = 1.790e-31 Identity = 52/87 (59.77%), Postives = 70/87 (80.46%), Query Frame = 1 Query: 19 STPIRQSSDMSQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKHSMDKKFGASWHCAIGEGFGFGVTYQQRNMIYVFYGQIGVLTFK 279 S P + +DM+ E+ E +EI+TM+ DK + +KNYEAAAQLIK SMDKKFGASWHC +GEG+GF V+YQQR+M++++ G IGVL +K Sbjct: 24 SKPHLKHNDMTAEVCTETMEIITMACDKHVPLKNYEAAAQLIKQSMDKKFGASWHCFVGEGYGFDVSYQQRHMLFIYVGXIGVLIYK 110 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1041.435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1041.435.1 >prot_F-serratus_M_contig1041.435.1 ID=prot_F-serratus_M_contig1041.435.1|Name=mRNA_F-serratus_M_contig1041.435.1|organism=Fucus serratus male|type=polypeptide|length=94bp MLSPHYSTPIRQSSDMSQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKHback to top mRNA from alignment at F-serratus_M_contig1041:59001..59854- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1041.435.1 ID=mRNA_F-serratus_M_contig1041.435.1|Name=mRNA_F-serratus_M_contig1041.435.1|organism=Fucus serratus male|type=mRNA|length=854bp|location=Sequence derived from alignment at F-serratus_M_contig1041:59001..59854- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1041:59001..59854- >mRNA_F-serratus_M_contig1041.435.1 ID=mRNA_F-serratus_M_contig1041.435.1|Name=mRNA_F-serratus_M_contig1041.435.1|organism=Fucus serratus male|type=CDS|length=564bp|location=Sequence derived from alignment at F-serratus_M_contig1041:59001..59854- (Fucus serratus male)back to top |