mRNA_F-serratus_M_contig1036.385.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1036.385.1 vs. uniprot
Match: A0A6H5JUW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUW6_9PHAE) HSP 1 Score: 112 bits (279), Expect = 3.190e-28 Identity = 59/136 (43.38%), Postives = 81/136 (59.56%), Query Frame = 1 Query: 1 YTDSEFGACLDTRRLVSGAVFMLAKGATSWHLMMQDVTAASTLEAEFVALSEVVKEVLFLRQVQEFMEPSMRVGTVDVFKDNGGIFKLATNRYASHRTKHIDVNHHLVRDASDARIVKVAYVRSGDQHADLLTKPL 408 Y D++F + RR VSG + GA SW Q ST EAE+VAL +VVKE+LFLRQ+ FM P + + + VF+DN G +LA N ++ +KHIDV HH +R+ + + + V +V S Q AD LTK L Sbjct: 60 YADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 195
BLAST of mRNA_F-serratus_M_contig1036.385.1 vs. uniprot
Match: A0A6H5JWJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ4_9PHAE) HSP 1 Score: 112 bits (279), Expect = 9.180e-28 Identity = 59/136 (43.38%), Postives = 81/136 (59.56%), Query Frame = 1 Query: 1 YTDSEFGACLDTRRLVSGAVFMLAKGATSWHLMMQDVTAASTLEAEFVALSEVVKEVLFLRQVQEFMEPSMRVGTVDVFKDNGGIFKLATNRYASHRTKHIDVNHHLVRDASDARIVKVAYVRSGDQHADLLTKPL 408 Y D++F + RR VSG + GA SW Q ST EAE+VAL +VVKE+LFLRQ+ FM P + + + VF+DN G +LA N ++ +KHIDV HH +R+ + + + V +V S Q AD LTK L Sbjct: 105 YADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 240
BLAST of mRNA_F-serratus_M_contig1036.385.1 vs. uniprot
Match: A0A6H5KEZ8_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ8_9PHAE) HSP 1 Score: 110 bits (275), Expect = 1.440e-27 Identity = 59/136 (43.38%), Postives = 80/136 (58.82%), Query Frame = 1 Query: 1 YTDSEFGACLDTRRLVSGAVFMLAKGATSWHLMMQDVTAASTLEAEFVALSEVVKEVLFLRQVQEFMEPSMRVGTVDVFKDNGGIFKLATNRYASHRTKHIDVNHHLVRDASDARIVKVAYVRSGDQHADLLTKPL 408 Y D++F + RR VSG + GA SW Q ST EAE+VAL EVVK +LFLRQ+ FM P + + + VF+DN G +LA N ++ +KHIDV HH +R+ + + + V +V S Q AD LTK L Sbjct: 65 YADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGEVVKVILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 200
BLAST of mRNA_F-serratus_M_contig1036.385.1 vs. uniprot
Match: A0A6H5KSZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ5_9PHAE) HSP 1 Score: 112 bits (279), Expect = 1.940e-27 Identity = 58/136 (42.65%), Postives = 81/136 (59.56%), Query Frame = 1 Query: 1 YTDSEFGACLDTRRLVSGAVFMLAKGATSWHLMMQDVTAASTLEAEFVALSEVVKEVLFLRQVQEFMEPSMRVGTVDVFKDNGGIFKLATNRYASHRTKHIDVNHHLVRDASDARIVKVAYVRSGDQHADLLTKPL 408 Y D++F + RR VSG + GA SW + Q ST EAE+VAL +VVKE+LFLRQ+ FM P + + + +F+DN G +LA N ++ +KHIDV HH +R+ + V +V S +Q AD LTK L Sbjct: 141 YADADFASKAADRRSVSGGIVTCGGGAVSWFSITQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGIPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVEREEFSVMHVPSPNQRADCLTKSL 276
BLAST of mRNA_F-serratus_M_contig1036.385.1 vs. uniprot
Match: A0A6H5KIJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ7_9PHAE) HSP 1 Score: 110 bits (274), Expect = 2.640e-27 Identity = 56/136 (41.18%), Postives = 81/136 (59.56%), Query Frame = 1 Query: 1 YTDSEFGACLDTRRLVSGAVFMLAKGATSWHLMMQDVTAASTLEAEFVALSEVVKEVLFLRQVQEFMEPSMRVGTVDVFKDNGGIFKLATNRYASHRTKHIDVNHHLVRDASDARIVKVAYVRSGDQHADLLTKPL 408 Y D++F + RR VSG + G+ SW Q ST EAE+VAL +VVKE++FLRQ+ FM P + + + +F+DN G +LA N ++ +KHIDV HH +R+ + + + V +V S Q AD LTK L Sbjct: 76 YADADFASKAANRRSVSGGIVTCGGGSVSWFSRTQKCVTLSTTEAEYVALGDVVKEIIFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 211
BLAST of mRNA_F-serratus_M_contig1036.385.1 vs. uniprot
Match: A0A6H5JHS1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHS1_9PHAE) HSP 1 Score: 112 bits (281), Expect = 1.880e-26 Identity = 58/136 (42.65%), Postives = 83/136 (61.03%), Query Frame = 1 Query: 1 YTDSEFGACLDTRRLVSGAVFMLAKGATSWHLMMQDVTAASTLEAEFVALSEVVKEVLFLRQVQEFMEPSMRVGTVDVFKDNGGIFKLATNRYASHRTKHIDVNHHLVRDASDARIVKVAYVRSGDQHADLLTKPL 408 Y D++F + RR VSG + GA SW+ + Q A ST EAE+VAL +VVKE+LF RQ+ FM P + + + +F+DN G +LA N ++ +KHIDV HH +R+ + + + V +V S Q AD LTK L Sbjct: 400 YADADFASKAADRRSVSGGIVTCGGGAVSWYSIAQKCVALSTTEAEYVALGDVVKEILFSRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKTL 535
BLAST of mRNA_F-serratus_M_contig1036.385.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 112 bits (279), Expect = 2.080e-26 Identity = 59/136 (43.38%), Postives = 81/136 (59.56%), Query Frame = 1 Query: 1 YTDSEFGACLDTRRLVSGAVFMLAKGATSWHLMMQDVTAASTLEAEFVALSEVVKEVLFLRQVQEFMEPSMRVGTVDVFKDNGGIFKLATNRYASHRTKHIDVNHHLVRDASDARIVKVAYVRSGDQHADLLTKPL 408 Y D++F + RR VSG + GA SW Q ST EAE+VAL +VVKE+LFLRQ+ FM P + + + VF+DN G +LA N ++ +KHIDV HH +R+ + + + V +V S Q AD LTK L Sbjct: 311 YADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 446
BLAST of mRNA_F-serratus_M_contig1036.385.1 vs. uniprot
Match: A0A6H5KLT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT9_9PHAE) HSP 1 Score: 109 bits (273), Expect = 2.090e-26 Identity = 59/136 (43.38%), Postives = 80/136 (58.82%), Query Frame = 1 Query: 1 YTDSEFGACLDTRRLVSGAVFMLAKGATSWHLMMQDVTAASTLEAEFVALSEVVKEVLFLRQVQEFMEPSMRVGTVDVFKDNGGIFKLATNRYASHRTKHIDVNHHLVRDASDARIVKVAYVRSGDQHADLLTKPL 408 Y D++F + RR VSG + GA SW Q ST EAE+VAL +VVKE+LFLRQ+ FM P + + VF+DN G +LA N ++ +KHIDV HH +R+ + + + V +V S Q AD LTK L Sbjct: 175 YADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCNPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 310
BLAST of mRNA_F-serratus_M_contig1036.385.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE) HSP 1 Score: 109 bits (272), Expect = 2.260e-26 Identity = 56/136 (41.18%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 1 YTDSEFGACLDTRRLVSGAVFMLAKGATSWHLMMQDVTAASTLEAEFVALSEVVKEVLFLRQVQEFMEPSMRVGTVDVFKDNGGIFKLATNRYASHRTKHIDVNHHLVRDASDARIVKVAYVRSGDQHADLLTKPL 408 + D+++ + RR VSG M +G SW Q ST EAE+V+L++V+KEVLFLRQV FM P + + VF+DN G +LA N ++ +KH DV HH + + + + + YV S QHAD LTK L Sbjct: 142 FADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHFDVRHHFIGELVGRKEISIFYVESAYQHADFLTKAL 277
BLAST of mRNA_F-serratus_M_contig1036.385.1 vs. uniprot
Match: A0A6H5L5I8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5I8_9PHAE) HSP 1 Score: 112 bits (281), Expect = 2.820e-26 Identity = 61/136 (44.85%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 1 YTDSEFGACLDTRRLVSGAVFMLAKGATSWHLMMQDVTAASTLEAEFVALSEVVKEVLFLRQVQEFMEPSMRVGTVDVFKDNGGIFKLATNRYASHRTKHIDVNHHLVRDASDARIVKVAYVRSGDQHADLLTKPL 408 Y D++F + RR VSG + G SW Q ST EAE+VAL +VVKE+LFLRQV FM P + + + VFKDN G +LA N ++ +KHIDV HH +R+ + + V YV S Q AD LTK L Sbjct: 1113 YADADFASKAADRRSVSGGIVTCGGGVVSWFSRTQKFVTLSTTEAEYVALGDVVKEILFLRQVWRFMLPKVSMPCIPVFKDNQGAIQLAQNPISNSNSKHIDVRHHFLRELEERKENSVIYVPSPYQRADFLTKRL 1248 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1036.385.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1036.385.1 >prot_F-serratus_M_contig1036.385.1 ID=prot_F-serratus_M_contig1036.385.1|Name=mRNA_F-serratus_M_contig1036.385.1|organism=Fucus serratus male|type=polypeptide|length=136bp YTDSEFGACLDTRRLVSGAVFMLAKGATSWHLMMQDVTAASTLEAEFVALback to top mRNA from alignment at F-serratus_M_contig1036:290526..290933+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1036.385.1 ID=mRNA_F-serratus_M_contig1036.385.1|Name=mRNA_F-serratus_M_contig1036.385.1|organism=Fucus serratus male|type=mRNA|length=408bp|location=Sequence derived from alignment at F-serratus_M_contig1036:290526..290933+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1036:290526..290933+ >mRNA_F-serratus_M_contig1036.385.1 ID=mRNA_F-serratus_M_contig1036.385.1|Name=mRNA_F-serratus_M_contig1036.385.1|organism=Fucus serratus male|type=CDS|length=816bp|location=Sequence derived from alignment at F-serratus_M_contig1036:290526..290933+ (Fucus serratus male)back to top |