mRNA_F-serratus_M_contig1035.375.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1035.375.1 vs. uniprot
Match: A0A6H5K1M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1M2_9PHAE) HSP 1 Score: 395 bits (1015), Expect = 5.290e-120 Identity = 218/348 (62.64%), Postives = 236/348 (67.82%), Query Frame = 1 Query: 1315 NVVTVKIARSQLPQRWATPSPPFKTCLDDVRPEDRLGGGV----------EDAGGVFALMEEDGVDSKNWLCSGLIDVVMAKLARTYPNVHFMPIDFSVLCLNGWEPEAAHGPSS--SHGDA----------------AAGAGAGSQSMVFQDILGRPIVYSEKKPMIFFTHVSNVHWNLLRVEHEPVPELQLFEPMGKPPRRMGGSRGQAGATGPS------SSRGTGFRCIPKEVYRWLDTVWPLHSSDTTPRRNSRAADPSSTSTAGVKRKAPSTSSPKDGWACRAYSAITSQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQEDMTEYRRALQRYFQEVL 2256 NVVTVK+ARSQ+P RWA P PPFKTCL DVRP D+LGG + L E D VD+KNWL SG IDVVMAK ARTY NVHFMPIDF+VLCLNGW P++ S GDA AA A QSMVF+D+LGRPIVYSEK+P+IF THV+NVHWNLLRVEH+PVPELQLFEPMGKPPRR G R TGFRCIPKEVYRWLD VWPL S R SS S G KRKAPS + +GWA RAYSAIT QQQTTGFDCGVASLLYAEKCGQGQMRED+DAWTTQ DMTEYRRALQRY +EVL Sbjct: 251 NVVTVKLARSQMPSRWAAPPPPFKTCLRDVRPADKLGGRACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGASDTPPPAAAASGGDAMGSEXXXXXXXXXAATAANADLADQSMVFKDVLGRPIVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGG-----EIRGGSCSSGS-GGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDIDAWTTQADMTEYRRALQRYVEEVL 592
BLAST of mRNA_F-serratus_M_contig1035.375.1 vs. uniprot
Match: D8LIB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB2_ECTSI) HSP 1 Score: 379 bits (974), Expect = 4.610e-114 Identity = 216/371 (58.22%), Postives = 234/371 (63.07%), Query Frame = 1 Query: 1315 NVVTVKIARSQLPQRWATPSPPFKTCLDDVRPEDRLGGGVEDAGG-----------------VFALMEEDGVDSKNWLCSGLIDVVMAKLARTYPNVHFMPIDFSVLCLNGW-EPEAAHGPSSSHGDA---------------------------------AAGAGAGSQSMVFQDILGRPIVYSEKKPMIFFTHVSNVHWNLLRVEHEPVPELQLFEPMGKPPRRMGGSRGQAGATGPS------SSRGTGFRCIPKEVYRWLDTVWPLHSSDTTPRRNSRAADPSSTSTAGVKRKAPSTSSPKDGWACRAYSAITSQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQEDMTEYRRALQRYFQEVL 2256 NVVTVK+ARSQ+P RWA P PPF+TCL DVRP D+LGG +GG + L E D VD+KNWL SG IDVVMAK ARTY NVHFMPIDF+VLCLNGW P+ AA A QSMVF+D+LGRPIVYSEK+P+IF THV+NVHWNLLRVEH+PVPELQLFEPMGKPPRR G R TGFRCIPKEVYRWLD VWPL S R SS S G KRKAPS + +GWA RAYSAIT QQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQ DMTEYRRALQRY +EVL Sbjct: 233 NVVTVKLARSQMPSRWAAPPPPFETCLRDVRPADKLGGRA--SGGRACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAANAALADQSMVFKDVLGRPIVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGG-----EIRGGSCSSGS-GGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEVL 595
BLAST of mRNA_F-serratus_M_contig1035.375.1 vs. uniprot
Match: A0A836CDU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU6_9STRA) HSP 1 Score: 223 bits (567), Expect = 4.520e-61 Identity = 133/308 (43.18%), Postives = 166/308 (53.90%), Query Frame = 1 Query: 1348 LPQRWATPSPPFKTCLDDVRPEDRL-----GGGVEDAGGVFALMEEDGVDSKNWLCSGLIDVVMAKLARTYPNVHFMPIDFSVLCLNGWEPEAAHGPSSSHGDAAAGAGAGSQSMVF-QDILGRPIVYSEKKPMIFFTHVSNVHWNLLRVEHEPVPELQLFEPMGKPPRRMGGSRGQAGATGPSSSRGTGFRCIPKEVYRWLDTVWPLHSSDTTPRRNSRAADPSSTSTAGVKRKAPSTSSPKDGWACRAYSAITSQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQEDMTEYRRALQRYFQEV 2253 +P RWA P PPF TCL+ P L GG V G + + D VD ++WL S ID+V+A+ A Y HFMPI+F+ L A G M DILG+ I Y+ +KP+IF +V N+HWNLLRV+H PVPELQLFEP+GKP +R A G SS G +R IPK+V+ WLDT+ GWA R+ SAIT QQQTTGFDCGVASLLYAEKCGQ QMRED+DA TTQ+D+T YR+ LQ++ + + Sbjct: 1 MPYRWAEPLPPFVTCLNQPAPLRLLRSPSSGGLVATDGVLRGALYGDSVDDESWLTSSFIDMVLAQFAACYRGAHFMPIEFAAFRL---------------------ARMGRADMAACTDILGQTIDYAARKPIIFLANVKNLHWNLLRVQHFPVPELQLFEPLGKPAKR---------AHGAHSSEGVSYRYIPKDVFVWLDTMCARGG----------------------------------GWATRSVSAITRQQQTTGFDCGVASLLYAEKCGQDQMREDIDAATTQDDITAYRQVLQKFLRSL 244
BLAST of mRNA_F-serratus_M_contig1035.375.1 vs. uniprot
Match: A0A7S2GCQ8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GCQ8_9STRA) HSP 1 Score: 205 bits (522), Expect = 8.750e-55 Identity = 118/318 (37.11%), Postives = 162/318 (50.94%), Query Frame = 1 Query: 1318 VVTVKIARSQLPQRWATPSPPFKTCLDDVRPEDRLGGGVEDAGG-------VFALMEEDGVDSKNWLCSGLIDVVMAKLARTYPNVHFMPIDFSVLCLNGWEPEAAHGPSSSHGDAAAGAGAGSQSMVFQDILGRPIVYSEKKPMIFFTHVSNVHWNLLRVEHEPVPELQLFEPMGKPPRRMGGSRGQAGATGPSSSRGTGFRCIPKEVYRWLDTVWPLHSSDTTPRRNSRAADPSSTSTAGVKRKAPSTSSPKDG----WACRAYSAITSQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQEDMTEYRRALQR 2238 VVTV++AR ++P RW P PPF + L + D+ +D G + M D V ++WL S ID+V+++ A+TY ++HFMPI+FS L + S + D++G+ I Y+ KP+IFF +++N+HWN+LRV+H P+ ELQLFEPMGKP +S G +R IP+ + WLDT WPL PKD W +A SAIT+Q Q FDCGVA LLYAEKC QG M+ED+ A T Q D+TE+R+ LQR Sbjct: 73 VVTVRLARCKMPYRWREPLPPFVSILSETELFDQWSEAPDDTGAACISESVLHRSMNGDEVKDESWLSSSFIDLVLSRFAKTYRSMHFMPIEFSEFRLKTMQK--------------------SDMLQATDLVGKKIDYNIPKPVIFFANIANMHWNVLRVQHWPLKELQLFEPMGKP----------------ASRNGVSYRNIPQHIIHWLDTCWPLDEGH-----------------------------PKDSGGRSWIVQACSAITTQHQVNSFDCGVACLLYAEKCAQGMMKEDIHATTNQRDITEFRQCLQR 325
BLAST of mRNA_F-serratus_M_contig1035.375.1 vs. uniprot
Match: A0A7S2SPQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPQ6_9STRA) HSP 1 Score: 203 bits (516), Expect = 2.930e-54 Identity = 122/323 (37.77%), Postives = 163/323 (50.46%), Query Frame = 1 Query: 1318 VVTVKIARSQLPQRWATPSPPFKTCLD---------DVRPEDRLGGGVEDAGGVFALMEEDGVDSKNWLCSGLIDVVMAKLARTYPNVHFMPIDFSVLCLNGWEPEAAHGPSSSHGDAAAGAGAGSQSMVFQ--DILGRPIVYSEKKPMIFFTHVSNVHWNLLRVEHEPVPELQLFEPMGKPPRRMGGSRGQAGATGPSSSRGTGFRCIPKEVYRWLDTVWPLHSSDTTPRRNSRAADPSSTSTAGVKRKAPSTSSPKDGWACRAYSAITSQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQEDMTEYRRALQRYFQEV 2253 VVTV++AR ++P RW P PPF + L+ D R D V + + D V ++WL S ID+V+++ AR YPNVHFMP++F+ L + +FQ DILG+ I Y+ +KP++F +++N+HWNL RV+H P+ ELQLFEPMGKP R G S R IPK + WLDTVWPL S + W R+ SAIT+Q Q TGFDCGVA +LYAEKC QG M+ED+D T Q D T++R+ LQR E+ Sbjct: 70 VVTVRLARCKMPYRWREPLPPFVSILNHVGALHLDSDARRLDHATVTV-----LRRALSSDEVQDESWLSSSFIDLVLSRYARRYPNVHFMPVEFAAFRLKTMQTVD----------------------MFQATDILGQRIDYNMRKPVVFLANIANMHWNLFRVQHWPLKELQLFEPMGKPATRHGVS----------------LRYIPKHIIHWLDTVWPLGSE-------------------------------AESWLFRSCSAITTQHQLTGFDCGVACILYAEKCAQGLMKEDIDDSTKQSDFTQFRQDLQRRLSEL 318
BLAST of mRNA_F-serratus_M_contig1035.375.1 vs. uniprot
Match: A0A5D6Y3L5_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3L5_9STRA) HSP 1 Score: 163 bits (413), Expect = 3.280e-41 Identity = 95/262 (36.26%), Postives = 128/262 (48.85%), Query Frame = 1 Query: 1465 EEDGVDSKNWLCSGLIDVVMAKLARTYPNVHFMPIDFSVLCLNGWE-PEAAHGPSSSHGDAAAGAGAGSQSMVFQDILGRPIVYSEKKPMIFFTHVSNVHWNLLRVEHEPVPELQLFEPMGKPPRRMGGSRGQAGATGPSSSRGTGFRCIPKEVYRWLDTVWPLHSSDTTPRRNSRAADPSSTSTAGVKRKAPSTSSPKDGWACRAYSAITSQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQEDMTEYRRALQRYFQ 2247 E+D +D +WL S L+D+++ +LA YP VHF+P DF L G + HG D +D+LGR + Y +P++F + +HWNL RV+ P PELQLFEPMG+P SS G R +P+ V WL+ +P H S W RA SAIT+ QQ +GFDCGVA LLYA+KCGQGQ R+++DA T Q +T +R LQ+ Q Sbjct: 54 EDDSIDDTSWLTSTLMDLMLWRLAGQYPGVHFLPTDFFHCVLEGRSRSRSQHGRKRGPSDC---------DFRVRDVLGRLVDYGSNRPLLFAVNCGRIHWNLFRVQLTPQPELQLFEPMGRP----------------SSRSGLSHRYVPRSVVEWLEACYPQHPS----------------------------------WISRAVSAITAPQQVSGFDCGVACLLYADKCGQGQTRQEIDARTDQLAITGFRATLQQQLQ 256
BLAST of mRNA_F-serratus_M_contig1035.375.1 vs. uniprot
Match: K3WTS6_GLOUD (ULP_PROTEASE domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTS6_GLOUD) HSP 1 Score: 158 bits (399), Expect = 2.290e-39 Identity = 90/257 (35.02%), Postives = 123/257 (47.86%), Query Frame = 1 Query: 1465 EEDGVDSKNWLCSGLIDVVMAKLARTYPNVHFMPIDFSVLCLNGWEPEAAHGPSSSHGDAAAGAGAGSQSMVFQDILGRPIVYSEKKPMIFFTHVSNVHWNLLRVEHEPVPELQLFEPMGKPPRRMGGSRGQAGATGPSSSRGTGFRCIPKEVYRWLDTVWPLHSSDTTPRRNSRAADPSSTSTAGVKRKAPSTSSPKDGWACRAYSAITSQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQEDMTEYRRALQ 2235 E+D +D +WL S L+D+++ +LA YPNVHF+P DF L G H H +D+LGR + Y +P++F ++ +HWNL RV+ P PELQLFEPMG+ R G S +R IP+ V WL+T +P H + W +A SAIT QQ +GFDCGVA LLYA+KCGQGQ + ++ T Q +T +R LQ Sbjct: 45 EDDKIDETSWLTSTLMDLILWRLANLYPNVHFLPTDFFHCHLEGVSRNYHHHYPRHHAPYMVNRANEESDFHVRDVLGRAVDYKSNQPILFAVNIGLIHWNLFRVQLTPHPELQLFEPMGRLASRTGIS----------------YRSIPRSVIEWLETCYPQHKN----------------------------------WISKAVSAITKPQQVSGFDCGVACLLYADKCGQGQTHQQINERTDQHAITSFRHTLQ 251
BLAST of mRNA_F-serratus_M_contig1035.375.1 vs. uniprot
Match: A0A7S2SPU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPU9_9STRA) HSP 1 Score: 150 bits (380), Expect = 2.920e-38 Identity = 81/188 (43.09%), Postives = 103/188 (54.79%), Query Frame = 1 Query: 1690 ILGRPIVYSEKKPMIFFTHVSNVHWNLLRVEHEPVPELQLFEPMGKPPRRMGGSRGQAGATGPSSSRGTGFRCIPKEVYRWLDTVWPLHSSDTTPRRNSRAADPSSTSTAGVKRKAPSTSSPKDGWACRAYSAITSQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQEDMTEYRRALQRYFQEV 2253 ILG+ I Y+ +KP++F +++N+HWNL RV+H P+ ELQLFEPMGKP R G S R IPK + WLDTVWPL S + W R+ SAIT+Q Q TGFDCGVA +LYAEKC QG M+ED+D T Q D T++R+ LQR E+ Sbjct: 5 ILGQRIDYNMRKPVVFLANIANMHWNLFRVQHWPLKELQLFEPMGKPATRHGVS----------------LRYIPKHIIHWLDTVWPLGSE-------------------------------AESWLFRSCSAITTQHQLTGFDCGVACILYAEKCAQGLMKEDIDDSTKQSDFTQFRQDLQRRLSEL 145
BLAST of mRNA_F-serratus_M_contig1035.375.1 vs. uniprot
Match: A0A2D4BLN7_PYTIN (WD repeat-containing protein srw1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLN7_PYTIN) HSP 1 Score: 163 bits (413), Expect = 1.070e-37 Identity = 101/267 (37.83%), Postives = 131/267 (49.06%), Query Frame = 1 Query: 1456 ALMEEDGVDSKNWLCSGLIDVVMAKLARTYPNVHFMPIDFSVLCLNGWEPEAAHGPSSSHGDAAAGAGAGSQSMVFQDILGRPIVYSEKKPMIFFTHVSNVHWNLLRVEHEPVPELQLFEPMGKPPRRMGGSRGQAGATGPSSSRGTGFRCIPKEVYRWLDTVWPLHSSDTTPRRNSRAADPSSTSTAGVKRKAPSTSSPKDGWACRAYSAITSQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQEDMTEYRRALQRYFQEVL 2256 AL ED V NWL LIDV + + A YP+VHF+P DF L L P S AA D+LGR + +++ +PMIF +V +HWNLLRV+ PV ELQLFEPMG+ +S RG FR IP+ V +WLD +P S W R SAIT+QQQ +G DCGVA LLYA+KC QGQ RE+++A Q ++ +RR LQR ++V+ Sbjct: 9 ALTTEDRVGDSNWLSGTLIDVALWRFATQYPHVHFLPTDFCHLLL----PSVLRRASDPRKLAA-------NDFQLWDVLGRAVEFADARPMIFVVNVGLIHWNLLRVQLHPVAELQLFEPMGRL----------------ASRRGISFRSIPRSVIQWLDVCFPQQQS----------------------------------WLRRTVSAITTQQQLSGVDCGVACLLYADKCAQGQHREEINATVDQPAISSFRRRLQRELRDVI 214
BLAST of mRNA_F-serratus_M_contig1035.375.1 vs. uniprot
Match: A0A662YFQ0_9STRA (ULP_PROTEASE domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFQ0_9STRA) HSP 1 Score: 149 bits (377), Expect = 6.650e-36 Identity = 94/291 (32.30%), Postives = 133/291 (45.70%), Query Frame = 1 Query: 1387 TCLDDVRPEDRLGGGVEDAGGVFALMEEDGVDSKNWLCSGLIDVVMAKLARTYPNVHFMPIDFSVLCLNGWEPEAA-------HGPSSSHGDAAAGAGAGSQSMVFQDILGRPIVYSEKKPMIFFTHVSNVHWNLLRVEHEPVPELQLFEPMGKPPRRMGGSRGQAGATGPSSSRGTGFRCIPKEVYRWLDTVWPLHSSDTTPRRNSRAADPSSTSTAGVKRKAPSTSSPKDGWACRAYSAITSQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQEDMTEYRRALQR 2238 +C DD + R+ G+ + A ED +D +WL LID+++ K A YP VHF+P F L + P D +D+LGR + Y P++F +V +HWNL RV+ +P P LQLFEPMG+ R G S +R +P+ V WL+T +P H+ GW R SAIT +QQ +GFDCGVA LLYA+KCG+GQ E+++A Q+ +T +R+ LQR Sbjct: 77 SCTDDAK---RMRYGLLQS----AFGPEDRIDETSWLTGTLIDLMLWKFANLYPTVHFLPTAFFHFHLEATNASSGVPWRRRRRRPKRLKRD-----------YQVRDVLGRVVDYDSDTPLVFIVNVGQIHWNLFRVQLQPTPRLQLFEPMGRLASRTGIS----------------YRSVPRSVIEWLETCYPQHT----------------------------------GWLARTVSAITHKQQVSGFDCGVACLLYADKCGRGQSGEEINAQIDQQAITSFRKQLQR 299 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1035.375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1035.375.1 >prot_F-serratus_M_contig1035.375.1 ID=prot_F-serratus_M_contig1035.375.1|Name=mRNA_F-serratus_M_contig1035.375.1|organism=Fucus serratus male|type=polypeptide|length=571bp METNSAPAVGNDPCGERPQLLCANSSVTDSSLSCGTSGSDSESSLFCGSSback to top mRNA from alignment at F-serratus_M_contig1035:19990..26489+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1035.375.1 ID=mRNA_F-serratus_M_contig1035.375.1|Name=mRNA_F-serratus_M_contig1035.375.1|organism=Fucus serratus male|type=mRNA|length=6500bp|location=Sequence derived from alignment at F-serratus_M_contig1035:19990..26489+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1035:19990..26489+ >mRNA_F-serratus_M_contig1035.375.1 ID=mRNA_F-serratus_M_contig1035.375.1|Name=mRNA_F-serratus_M_contig1035.375.1|organism=Fucus serratus male|type=CDS|length=3426bp|location=Sequence derived from alignment at F-serratus_M_contig1035:19990..26489+ (Fucus serratus male)back to top |