mRNA_F-serratus_M_contig1.32.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1.32.1
Unique NamemRNA_F-serratus_M_contig1.32.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1.32.1 vs. uniprot
Match: D7FR67_ECTSI (Ubiquitin family protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR67_ECTSI)

HSP 1 Score: 474 bits (1220), Expect = 8.320e-155
Identity = 378/579 (65.28%), Postives = 401/579 (69.26%), Query Frame = 3 
Query:  336 MSEVSINVRCSNGEKFTAEIGLDSTVLAFKQKISEKAGVPPERQRLIYKGRVMKEDQNTLVSYTVEANSTVHLVRSQARTTPA-PAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGMDINRMQQQLMSNPEMMASIMNSPMMEGXXXXXXXLRSIMFSNPQXXXXXXXXXXXXAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMTNNDSAGSARSNNPAPAPASN-PSGGPNTSALPNPWAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGASQFDPAMMQNLMGNPMVQQMVNQMAEDPVLMESMIAQNPHLQQAMQANPALREQLPQFMRRMTDPQNVQALAQMQQSXXXXXXXXXXXXXXXXXXXXXVGSGAEFGPGLTGLGGFGNLNLGVPGTPPAAGGLDFSSLLGGQGAGLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLANPEERYAAQLAQMSDMGFTDRAACVRALVASQGNVNAAVERMLGGGV 2066
            M EVS+NVRCSNGEKFT E+  ++TVLAFKQKISEKAGV PE QRLIYKGRVMKEDQ+TL SYTVEA+STVHLVRSQAR  P+ PA                         XXX             GGGMDINRMQQQLMSNPEMMA+IMN      XXXXXXX          XXXXXXXXXXXX      PATMRQYL+MARNP AM QARRSQDLMMSQIENQPGGFNALRR+Y EVQEPMMQASEGM  ND+AG+A +N          PS GPNTSALPNPWA A XXXXXXXXX                                PG  Q DPAMMQ +M NPMVQQMV+QMA+DP +ME+MIAQNP LQQA+QANPALR QLPQFMRRM DPQNVQALAQMQQ                       G GA+FGPGL GL  FG  NLG  GTPPAAGGLDFS+LLG             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP +ANPEE YAAQL QM+DMGFTDRAACVRALVASQGNVN AVERMLGGGV
Sbjct:    1 MPEVSVNVRCSNGEKFTTEVDTEATVLAFKQKISEKAGVAPELQRLIYKGRVMKEDQDTLASYTVEADSTVHLVRSQARAAPSMPAAGGAAGTNPSPSATNPFGGTPPGGAXXXGANPFAEMMGSMGGGGMDINRMQQQLMSNPEMMANIMNXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVGNDNAGTAGANXXXXXXXXXXPSAGPNTSALPNPWAAAGXXXXXXXXXTNAPAQTPGANPWAALRQGMGAAGGGMPGM--PGGGQMDPAMMQQMMNNPMVQQMVSQMADDPAIMETMIAQNPQLQQALQANPALRGQLPQFMRRMADPQNVQALAQMQQWMEQLQRAGVLPPGMMPGPPGAGGGGADFGPGLAGLSNFGTFNLGG-GTPPAAGGLDFSTLLGXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPVANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLGGGV 564
[Close]
BLAST of mRNA_F-serratus_M_contig1.32.1 vs. uniprot
Match: A0A835Z7M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M7_9STRA)

HSP 1 Score: 263 bits (671), Expect = 1.050e-74
Identity = 262/584 (44.86%), Postives = 317/584 (54.28%), Query Frame = 3 
Query:  336 MSEVSINVRCSNGEKFTAEIGLDSTVLAFKQKISEKAGVPPERQRLIYKGRVMKEDQNTLVSYTVEANSTVHLVRS-----QARTTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGMDINRMQQQLMSNPEMMASIMNSPMMEGXXXXXXXLRSIMFSNPQXXXXXXXXXXXXAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMTNNDSAGSARSNNPAPAPASNPSGGPNTSALPNPWAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGASQFDPAMMQNLMGNPMVQQMVNQMAEDPVLMESMIAQNPHLQQAMQANPALREQLPQFMRRMTDPQNVQALAQMQQSXXXXXXXXXXXXXXXXXXXXXVGSGAEFGPGLTGLGGFGNLNLGVPGTPP----AAGGLDFSSLLGGQGAGLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLANPEERYAAQLAQMSDMGFTDRAACVRALVASQGNVNAAVERMLGG 2060
            MS V +++RCSN +KFT  +    TV AFK  I+E+A VP E QRLIYKGRV+K+DQ TL SY V+ ++T+HLVR      +A       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         GGG DI+RMQQQL+SNPEMMA+IMNSPMM+G       LRS M +   XXXXXXXXXXXX  V NDPA +RQ LEM RNPAAM +A RSQD  MS +E  P GFNALRR+Y E+QEPMM+A   M+N +                        +A+PNPWA                  XXX                       PG +Q DPA + N+M NPM Q M+ QM  +P ++E M+  NP L+  + A P +R+QLPQ +  M+DP N+QA+ QMQQS                XXXXX  + A                     TP     AAGGLDFS+LL G G G+                                               P  ANP E YAAQLAQ+  MGF+D AA +RALV ++GNVNAAVER++GG
Sbjct:    1 MSSV-VHIRCSNAQKFTVPLDTSVTVGAFKATIAEQAQVPAESQRLIYKGRVLKDDQ-TLASYDVQPDTTIHLVRGARPAGEAAAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGMMQGMMGGGADISRMQQQLLSNPEMMANIMNSPMMQGLLNDPETLRS-MVTGXXXXXXXXXXXXXXXXVFNDPAVIRQSLEMMRNPAAMREAMRSQDRAMSNLETHPEGFNALRRMYTEMQEPMMEA---MSNPEQQXXXXXXXXXXXXXX------XGTAMPNPWA-----APGAAPQAAGAAGXXXAGANPWSSLMGGAGGPPPAGMAPPGMAQ-DPAAVLNMMQNPMAQDMIRQMTSNPAVVEQMLNMNPQLRAMVDAQPGMRQQLPQLLSGMSDPANLQAMIQMQQSMAQLQRAGIMPPIPGMXXXXXAPAAA---------------------TPXXXXXAAGGLDFSALLAGHGVGM----------------------------PPGSGAAVPPAWLAAAQPPPPPANPAEAYAAQLAQLRAMGFSDDAASLRALVDARGNVNAAVERLIGG 517
[Close]
BLAST of mRNA_F-serratus_M_contig1.32.1 vs. uniprot
Match: A0A6D2I4V8_9BRAS (Uncharacterized protein n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2I4V8_9BRAS)

HSP 1 Score: 192 bits (487), Expect = 1.070e-48
Identity = 194/611 (31.75%), Postives = 272/611 (44.52%), Query Frame = 3 
Query:  345 VSINVRCSNGEKFTAEIGLDSTVLAFKQKISEKAGVPPERQRLIYKGRVMKEDQNTLVSYTVEANSTVHLVRSQART--------------TPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGM-DINRMQQQLMSNPEMMASIMNSPMMEGXXXXXXXLRSIMFSNPQXXXXXXXXXXXXAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQAS--EGMTNNDSA----------------GSARSNNPAPAPASNPSGG--PNTSALPNPWAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGASQFDPAMMQNLMGNPMVQQMVNQMAEDPVLMESMIAQNPHLQQAMQANPALREQL--PQFMRRMTDPQNVQALAQMQQSXXXXXXXXXXXXXXXXXXXXXVGSGAEFGPGLTGLGGFGNLNLGVPGTPPAAGGLDF-SSLLGGQGAG--LGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLANPEERYAAQLAQMSDMGFTDRAACVRALVASQGNVNAAVERMLG 2057
            V++NVRCSNG KF+    LDSTV AFK+ +++ + VP  +QRLIYKGR++K+DQ+ L+SY ++ + T+H+VR  A +              T AP+                                         G G+ D+ + QQQL  NP M+  +MN+P ++        +RS++ SNPQ       XXXX   VLNDP+ +RQ LE ARNP  M +  R+ D  MS IE+ P GFN LRR+Y  VQEP + A+   G   +++A                GS  SNN +   A   +G   PN++ LPNPW                            XXXXXXXXXXX       G +  D + +  L+ NP + QM+  +  +P  M  +++ NP +Q  + +NP LRE +  P F+R+ + P+ +Q +  +QQS                             PG TG    G  N           GLD   ++ G  GAG   GA                                                  PEER+A QL Q+ +MGF DRA  +RAL+A+ GNVNAAVER+LG
Sbjct:   23 VAVNVRCSNGTKFSVTTSLDSTVEAFKELVAQNSDVPANQQRLIYKGRILKDDQS-LLSYGLQGDHTIHMVRGFAPSSAPPPAPAANAGNQTTAPSATRGVGGNDSSNLGGVNPVESLFPGLGFNPLGGGNAMSGLFGAGLPDLEQAQQQLAQNPNMIRDMMNTPAIQNIMNNPEFMRSMIMSNPQMRELVDRXXXX-GHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIESMPEGFNHLRRMYENVQEPFLNATTMSGNAGSNAASNPFAALLGNQGVTTQGSDVSNNSSTPNADTGTGNSIPNSNPLPNPWGATGGQTTAPGRTNSGGDARGPALGGLGXXXXXXXXXXXLGADPTLGGTP-DASQLNQLLQNPAMSQMMQSVLSNPQYMNQLMSLNPQVQGMLDSNPQLREMMQNPDFLRQFSSPEMMQQMMTLQQSLFSQNRNTTTQD-----------------PGQTGAAAAGTGNNA---------GLDLLMNMFGSLGAGGLSGANQPNVP--------------------------------------------PEERFATQLQQLQEMGFYDRAENIRALLATNGNVNAAVERLLG 560
[Close]
BLAST of mRNA_F-serratus_M_contig1.32.1 vs. uniprot
Match: A0A1S4A5X4_TOBAC (ubiquitin domain-containing protein DSK2b-like isoform X1 n=13 Tax=Nicotiana TaxID=4085 RepID=A0A1S4A5X4_TOBAC)

HSP 1 Score: 191 bits (486), Expect = 1.090e-48
Identity = 195/600 (32.50%), Postives = 263/600 (43.83%), Query Frame = 3 
Query:  345 VSINVRCSNGEKFTAEIGLDSTVLAFKQKISEKAGVPPERQRLIYKGRVMKEDQNTLVSYTVEANSTVHLVRSQARTTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGM------DINRMQQQLMSNPEMMASIMNSPMMEGXXXXXXXLRSIMFSNPQXXXXXXXXXXXXAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASE--GMTNNDSA-----------GSARSNNPAPAP-------ASNPSGGPNTSALPNPWAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGASQFDPAMMQNLMGNPMVQQMVNQMAEDPVLMESMIAQNPHLQQAMQANPALRE--QLPQFMRRMTDPQNVQALAQMQQSXXXXXXXXXXXXXXXXXXXXXVGSGAEFGPGLTGLGGFGNLNLGVPGTPPAAGGLDFSSLLGGQGAG-LGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLANPEERYAAQLAQMSDMGFTDRAACVRALVASQGNVNAAVERMLG 2057
            V+INVRCSNG KF+ ++ LDSTV +FK  +S+ + +P E+QRLIYKGR++K+DQ TL SY +EA+ TVHLVR  A   PA +                                         GGG       D  ++QQQL  NP+MM  +MN P+++    XXXX          XXXXXXXXXXXX  +LNDP+T+RQ +E ARNP  M +  R+ D  MS IE+ P GFN LRR+Y  VQEP + A+   G T NDS            G  +  N A +P        +NP   PNT+ LPNPWA A                                                D + +  LM NP + QM+  +  +P  M  +   NP L+  + +NP LRE  Q P+F+R++T P+ +Q +  +QQ                       G G +      G   F N+ + +             ++ GG G G LG                                                   PEE YA QLAQ+ +MGF D    +RAL+A+ GNV+AAVER+LG
Sbjct:   27 VTINVRCSNGSKFSVQVSLDSTVGSFKSVLSQPSDIPAEQQRLIYKGRILKDDQ-TLTSYGLEADHTVHLVRGFA---PAASASATNAGNPNTNQNIPGDAPPNVGGPFAGVGGAPLFPGLGSGGGPFGAGLPDFEQVQQQLTQNPDMMRDMMNMPLVQNLMNXXXXXXXXXXXX-XXXXXXXXXXXXXXHILNDPSTLRQTMEAARNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGDTRNDSGANPFAALLGAQGGGQGRNQATSPPVTGSETTANPPA-PNTNPLPNPWASAGTGAAQTNTTARSNAAADTRAPPLGGLGALPDLQQMLGGMP-------DASSLNQLMQNPAISQMMQSLLSNPQYMNQISGLNPQLRSMLDSNPHLREXMQXPEFIRQLTSPETMQQVMTLQQGLLSQLGRQQTNQ----------GQGQD-----AGRTAFDNMGMEM-----------LMNMFGGLGTGGLGVPNRSNVP-------------------------------------------PEELYATQLAQLQEMGFFDTQENIRALIATAGNVHAAVERLLG 544
[Close]
BLAST of mRNA_F-serratus_M_contig1.32.1 vs. uniprot
Match: A0A1D6JMS0_MAIZE (Ubiquitin domain-containing protein DSK2b n=13 Tax=Andropogoneae TaxID=147429 RepID=A0A1D6JMS0_MAIZE)

HSP 1 Score: 188 bits (477), Expect = 1.420e-47
Identity = 173/594 (29.12%), Postives = 246/594 (41.41%), Query Frame = 3 
Query:  339 SEVSINVRCSNGEKFTAEIGLDSTVLAFKQKISEKAGVPPERQRLIYKGRVMKEDQNTLVSYTVEANSTVHLVRSQAR--TTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGMDINRMQQQLMSNPEMMASIMNSPMMEGXXXXXXXLRSIMFSNPQXXXXXXXXXXXXAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQA----SEGMTN-------------NDSAGSARSNNPAPAPASNPSGGPNTSALPNPWAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGASQFDPAMMQNLMGNPMVQQMVNQMAEDPVLMESMIAQNPHLQQAMQANPALREQL--PQFMRRMTDPQNVQALAQMQQSXXXXXXXXXXXXXXXXXXXXXVGSGAEFGPGLTGLGGFGNLNLGVPGTPPAAGGLDFSSLLGGQGAGLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLANPEERYAAQLAQMSDMGFTDRAACVRALVASQGNVNAAVERMLG 2057
            ++ ++++RC+NG KF     L +TV  FK  +++   VP  +QRLIYKGR++K++Q TL SY VE + T+H+VR  A    + APA                                          G  +++ MQQQL  NP +M  IMN P+M+        +RSI+ +NPQ            A VLNDP+ MRQ  E  RNP  M +  R+ D  MS IE+ P GFN LRR+Y  VQEP + A    SEG  N             N +  SA +     +  ++ +  PNT+ LPNPW P                                            G S  D   +  ++ NP + QM+  +  +P  M  ++  NP+++  M++N  +RE +  P+F+R++T P+ +Q L   QQS                       +G E     +G G   N+NL             FS L  G G GLG                                                   PEE YA QLAQ+ +MGF D    +RAL A+ GNV+AAVER+LG
Sbjct:   15 AQATLHIRCTNGSKFAVRADLGATVGTFKAIVADSCDVPAPQQRLIYKGRILKDEQ-TLASYGVETDHTIHMVRGAAPPPASTAPAANQEPTTAAPASSPAAGLGGLLQNLGATGAAANSGGLGLFGSGLPELDHMQQQLAENPNLMREIMNMPLMQNLMNSPELIRSIIMNNPQMRELIDRNPDL-AHVLNDPSIMRQTFEAVRNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATTMGSEGDRNSNPFAALLGNQGSNQARDSAANGTTTASDTTSGAPAPNTNPLPNPWGPNAGSAQGAARSPPATNTRSTTAGGPGGLGSADFGSTLGASG---GGS--DATFLTQVLQNPTMMQMMQNIMSNPQSMNQLLNMNPNVRNMMESNTQMREMIQNPEFIRQLTSPETLQQLISFQQSLMSQLGQQQ--------------TGQERTQSASGAG---NVNLNTLMNM-------FSGL--GAGGGLGVPNAPNVP-------------------------------------------PEELYATQLAQLQEMGFFDTQENIRALAATAGNVHAAVERLLG 532
[Close]
BLAST of mRNA_F-serratus_M_contig1.32.1 vs. uniprot
Match: A0A078F0B9_BRANA (BnaC03g47520D protein n=14 Tax=Brassiceae TaxID=981071 RepID=A0A078F0B9_BRANA)

HSP 1 Score: 186 bits (472), Expect = 6.890e-47
Identity = 179/598 (29.93%), Postives = 250/598 (41.81%), Query Frame = 3 
Query:  345 VSINVRCSNGEKFTAEIGLDSTVLAFKQKISEKAGVPPERQRLIYKGRVMKEDQNTLVSYTVEANSTVHLVRSQA-RTTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGM-DINRMQQQLMSNPEMMASIMNSPMMEGXXXXXXXLRSIMFSNPQXXXXXXXXXXXXAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMTNNDSAGSARSNNPAPA----------PASNPS-----------GGPNTSALPNPWAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGASQFDPAMMQNLMGNPMVQQMVNQMAEDPVLMESMIAQNPHLQQAMQANPALRE--QLPQFMRRMTDPQNVQALAQMQQSXXXXXXXXXXXXXXXXXXXXXVGSGAEFGPGLTGLGGFGNLNLGVPGTPPAAGGLDF-SSLLGGQGAG-LGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLANPEERYAAQLAQMSDMGFTDRAACVRALVASQGNVNAAVERMLG 2057
            V++NVRCSNG KF+    LDSTV AFK+ +++ + VP  +QRLIYKGR++K+DQ TL+SY ++A+ TVH+VR  A  ++P P+                                         G G+ D+ + QQQL  NP M+  +MN P ++        +RS++ SNPQ              VLNDP+ +RQ LE ARNP  M +  R+ D  MS IE+ P GFN LRR+Y  VQEP+M A+   T   + GS  ++NP  A           ASN S           G PN + LPNPW                                             P  +  D + +  ++ NP + QM+  +  +P  M  ++  NP L+             Q P F+R+ + P+ +Q +  +QQS                             PG TG    G  N           GLD   ++ G  GAG LG+                                                  PEER+A QL Q+ +MGF DRA  +RAL+A+ GNVNAAVER+LG
Sbjct:   20 VAVNVRCSNGSKFSVSTSLDSTVEAFKELVAQNSEVPANQQRLIYKGRILKDDQ-TLLSYGLQADHTVHMVRGSAPSSSPPPSAPATTQTTAPGVTRGVGSNDSSIPGLGFNPLGGGNAMSGLFGAGLPDLEQAQQQLAQNPNMIRDMMNQPAIQSLMNNPEFMRSMIMSNPQMRDLVDRNPEL-GHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIESMPEGFNHLRRMYENVQEPLMNAT---TMPGNGGSNAASNPFAALLGNQGVTTDAASNNSTTQNAETGTGNGIPNANPLPNPWGATAGQTNAPGTTNSGGDTRSTGLGLGGLGMLGADS---------PLGATPDASQLNQILQNPAMSQMMQSVLSNPQYMNQLMNLNPQLRTXXXXXXXXXXXXQNPDFLRQFSSPEMMQQMMTLQQSLFSQNRNTTTQD-----------------PGQTGAAAAGAGNNA---------GLDLLMNMFGSLGAGGLGSTNQPNVP-------------------------------------------PEERFATQLQQLQEMGFYDRAENIRALLATNGNVNAAVERLLG 534
[Close]
BLAST of mRNA_F-serratus_M_contig1.32.1 vs. uniprot
Match: I1MMX7_SOYBN (Uncharacterized protein n=30 Tax=Phaseoleae TaxID=163735 RepID=I1MMX7_SOYBN)

HSP 1 Score: 186 bits (471), Expect = 9.910e-47
Identity = 221/596 (37.08%), Postives = 292/596 (48.99%), Query Frame = 3 
Query:  345 VSINVRCSNGEKFTAEIGLDSTVLAFKQKISEKAGVPPERQRLIYKGRVMKEDQNTLVSYTVEANSTVHLVRSQARTTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG----------GGMDINRMQQQLMSNPEMMASIMNSPMMEGXXXXXXXLRSIMFSNPQXXXXXXXXXXXXAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASE--GMTNNDSAGSA---------RSNNPAPAPASNPSGGP--NTSALPNPWAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGASQFDPAMMQNLMGNPMVQQMVNQMAEDPVLMESMIAQNPHLQQAMQANPALRE--QLPQFMRRMTDPQNVQALAQMQQSXXXXXXXXXXXXXXXXXXXXXVGSGAEFGPGLTGLGGFGNLNLGVPGTPPAAGGLDFSSLLGGQGAGLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLANPEERYAAQLAQMSDMGFTDRAACVRALVASQGNVNAAVERMLG 2057
            V+INVRCSNG KF+ +I +DSTV +FK  ++    +P E+QRLIYKGR++K+DQ TL SY +EA+ TVHLVR  A   P       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           G  D+ +MQQ  +SNP ++  IMNSP M+        +R++      XXXXXXXX    A +LNDP+T+RQ LE  RNP  M +  R+ D  MS IE+ P GFN LRR+Y  +QEP + A+   G T N++A  +         RS NP+   +   +G P  NT+ LPNPW+                                             G++  D A++  LM NP + QM+  M  +P  +  ++  N   Q+ M    +LRE  Q P+F+R  + P+ +Q L   QQ+                       S  E G    G G   NL L +            SS+ GG GAG  A                                                  PE+ YA+QL+Q+ +MGF D    +RAL+A+ GNV+AAVER+LG
Sbjct:   15 VNINVRCSNGFKFSVQIAVDSTVSSFKDVVARNCDIPAEQQRLIYKGRILKDDQ-TLRSYGLEADHTVHLVRGSAPANPTGGTNTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGEGFPDLEQMQQPFISNPNLVREIMNSPTMQNLMNNPEIVRNLXXXX-XXXXXXXXXNPELAHILNDPSTLRQTLEATRNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENIQEPFLNATTMAGNTGNNNAAVSGTHGGHARDRSTNPSTTSSEATAGSPLPNTNPLPNPWSSTGTGGAQNNPRRSLTTGVDARQQGPTGLGGLGLPDLESMMG---GSAMPDAALLTQLMQNPAISQMMQSMLSNPQTLNQILGANTE-QRGMPDLNSLREVMQNPEFLRLFSSPETLQQLLSFQQALMSQLGQQQ--------------STRESGQTGGGTGPMNNLGLEM-----------LSSMFGGLGAGSLAVPNRSNEP------------------------------------------PEQLYASQLSQLQEMGFFDTQENIRALIATSGNVHAAVERLLG 537
[Close]
BLAST of mRNA_F-serratus_M_contig1.32.1 vs. uniprot
Match: A0A2K1KMH3_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KMH3_PHYPA)

HSP 1 Score: 186 bits (471), Expect = 1.290e-46
Identity = 221/602 (36.71%), Postives = 289/602 (48.01%), Query Frame = 3 
Query:  333 NMSEVSINVRCSNGEKFTAEIGLDSTVLAFKQKISEKAGVPPERQRLIYKGRVMKEDQNTLVSYTVEANSTVHLVRSQARTTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGG-----GM---DINRMQQQLMSNPEMMASIMNSPMMEGXXXXXXXLRSIMFSNPQXXXXXXXXXXXXAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQAS----EG---MTNNDSAGSARSNNPAPAPASNPSGG---------PNTSALPNPWAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGASQF-DPAMMQNLMGNPMVQQMVNQMAEDPVLMESMIAQNPHLQQAMQANPALREQL--PQFMRRMTDPQNVQALAQMQQSXXXXXXXXXXXXXXXXXXXXXVGSGAEFGPGLTGLGGFGNLNLGVPGTPPAAGGLDFSSLLGGQGAGLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLANPEERYAAQLAQMSDMGFTDRAACVRALVASQGNVNAAVERMLG 2057
            + S   ++VRCSNG KF  E+ L +TVL  K  + +K+ +P ++QRLIYKGRV+K++Q TL SY +++  TVHLVR  A  +  PA   XXXXXXXXXXXXXXXXXXXXXXXXXX            GG     GM   +  ++QQQLM NP +M  +MN P +  XXXXXXX  +++ SNPQ XXXXXXXXX  A +LNDP T+RQ L+ ARNP  M +  R+ D  MS IE  P GFN LRR+Y  VQEP++ A+    EG   M +N  A     N   P PA    G          PNT+ LPNPW P                                            GA    DPAMMQ ++ NP +QQM+  +  +   M  M+   P L+  +  NP  R+ +  P F+R+ + P+++Q + Q+QQ+                        G   G    GLG  G             GG++   LL   G GLG                                                   PE+ YA+QL+Q+ +MGF D    +RAL A  GNV+AAVER+LG
Sbjct:   20 SSSNAVVHVRCSNGNKFVVEVDLGATVLTLKGFLVDKSAIPADQQRLIYKGRVLKDEQ-TLNSYGLQSEHTVHLVRG-APPSSTPAGANXXXXXXXXXXXXXXXXXXXXXXXXXXGLGFPGLGLGSSGGASPPFGMGPSEFQQVQQQLMQNPNLMREMMNMPAVXXXXXXXXXXXTLIMSNPQMXXXXXXXXXL-AHILNDPGTLRQTLDAARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEPLLNAATMGGEGANDMASNPFAAMMGVNGNPPRPAQAQGGANTNAAGTTLPNTAPLPNPWNPTHSAVLPAAGTGAGQTPSAVPGADAGGVLPDLAGLGLPDLGMMGGAGGLLDPAMMQQMLQNPQIQQMMQGLLSNXXYMNQMLNLQPQLRNMLNQNPQFRDMMQNPDFIRQXSSPESLQQMMQLQQAMMGLRGRQTP--------------GQNAGQTPAGLGELGXXXX-------XXGGMNMDVLLNMFG-GLGNTVPSNPDVP-----------------------------------------PEQLYASQLSQLQEMGFYDTQENIRALSAVGGNVHAAVERLLG 555
[Close]
BLAST of mRNA_F-serratus_M_contig1.32.1 vs. uniprot
Match: DSK2B_ARATH (Ubiquitin domain-containing protein DSK2b n=17 Tax=Brassicaceae TaxID=3700 RepID=DSK2B_ARATH)

HSP 1 Score: 184 bits (467), Expect = 4.050e-46
Identity = 199/609 (32.68%), Postives = 273/609 (44.83%), Query Frame = 3 
Query:  345 VSINVRCSNGEKFTAEIGLDSTVLAFKQKISEKAGVPPERQRLIYKGRVMKEDQNTLVSYTVEANSTVHLVRSQARTT---PAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGM---------DINRMQQQLMSNPEMMASIMNSPMMEGXXXXXXXLRSIMFSNPQXXXXXXXXXXXXAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQAS--EGMTNNDSA----------------GSARSNNPAPAPASNPSGG----PNTSALPNPW-APAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGASQFDPAMMQNLMGNPMVQQMVNQMAEDPVLMESMIAQNPHLQQAMQANPALRE--QLPQFMRRMTDPQNVQALAQMQQSXXXXXXXXXXXXXXXXXXXXXVGSGAEFGPGLTGLGGFGNLNLGVPGTPPAAGGLDF-SSLLGGQGAGLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLANPEERYAAQLAQMSDMGFTDRAACVRALVASQGNVNAAVERMLG 2057
            V++N+RCSNG KF+ +  LDSTV +FK+ +++ + VP  +QRLIYKGR++K+DQ TL+SY ++A+ T+H+VR  A ++   PAPA                                         G  M         D+ + QQQL  NP M+  +MN+P ++        +RS++ +NPQXX     X      VLNDP+ +RQ LE ARNP  M +  R+ D  MS IE+ P GFN LRR+Y  VQEP+M A+   G   N++                 GS  SNN     +S P+ G    PN + LPNPW A                       XXXXXXXXXXXXXXXXXX   P  +  D + +  L+ NP + QM+  +  +P  M  +++ NP L+             Q P F+R+ + P+ +Q +  +QQS                         A    G TG     N            GGLD   ++ G  GAG                                                P    PEERYA QL Q+ +MGF DRA  +RAL+A+ GNVNAAVER+LG
Sbjct:   18 VAVNIRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQ-TLLSYGLQADHTIHMVRGSAPSSAPPPAPAASQTTAPSVTRGVGSDNSSNLGGASPGESLFPGLGFNPLGGGNAMSGLFGAGLPDLVQTQQQLAQNPNMIRDMMNTPAIQNLMNNPEFMRSMIMNNPQXXELVDRXPEL-GHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIESMPEGFNMLRRMYENVQEPLMNATTMSGNAGNNTGSNPFAALLGNQGVTTQGSDASNN-----SSTPNAGTGTIPNANPLPNPWGATGGQTTAPGRTNVGGDARSPGLGXXXXXXXXXXXXXXXXXXADSPLGATPDASQLSQLLQNPAISQMMQSVFSNPQYMNQLMSLNPQLRXXXXXXXXXXXXXQNPDFLRQFSSPEMMQQMMTLQQSLSQNRNT------------------ASQDAGQTGAATGNN------------GGLDLLMNMFGSLGAG--------------------------------------GLSGTNQSNVP----PEERYATQLQQLQEMGFYDRAENIRALLATNGNVNAAVERLLG 547
[Close]
BLAST of mRNA_F-serratus_M_contig1.32.1 vs. uniprot
Match: A0A087HDA2_ARAAL (Uncharacterized protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087HDA2_ARAAL)

HSP 1 Score: 180 bits (457), Expect = 1.230e-44
Identity = 202/618 (32.69%), Postives = 273/618 (44.17%), Query Frame = 3 
Query:  330 ENMSEVSINVRCSNGEKFTAEIGLDSTVLAFKQKISEKAGVPPERQRLIYKGRVMKEDQNTLVSYTVEANSTVHLVRSQARTTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGM---------------DINRMQQQLMSNPEMMASIMNSPMMEGXXXXXXXLRSIMFSNPQXXXXXXXXXXXXAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMTNNDSAGSARSNNPAPA------------PASNPSGGPNTSA-----------LPNPW-APAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGASQFDPAMMQNLMGNPMVQQMVNQMAEDPVLMESMIAQNPHLQQAMQANPALRE--QLPQFMRRMTDPQNVQALAQMQQSXXXXXXXXXXXXXXXXXXXXXVGSGAEFGPGLTGLGGFGNLNLGVPGTPPAAGGLDF-SSLLGGQGAGLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLANPEERYAAQLAQMSDMGFTDRAACVRALVASQGNVNAAVERMLG 2057
            E  + V++N+RCSNG KF+    LDS V +FK+ ++EK+ VP  +QRLIYKGR++K+DQ+ LVSY ++A+ TVH+VR  A ++ APA                                         GGG                D+ + QQQL  NP M+  +MN+P ++        +RS++ SNPQ              VLNDP+ +RQ LE ARNP  M +  R+ D  MS IE+ P GFN LRR+Y  VQEP + A+   T + +AG     NP  A             ASN S  PNT A           LPNPW A                   XXXXXXXXXXXXXXXXXXXXX     G +  D + +  ++ NP + QM+  +  +P  M  +++ NP L+             Q P F+R+ + P+ +Q +  +QQS                             PG TG  G             A  GLD   ++ GG GAG                                                P    PEER+A QL Q+ +MGF DRA  +RAL+A+ GNVNAAVE++LG
Sbjct:   18 EGEAMVAVNIRCSNGTKFSVMTSLDSMVESFKELVAEKSEVPANQQRLIYKGRILKDDQS-LVSYGLQADHTVHMVRGIAPSS-APASAPVVNAGNQTTAPNATRGVGSTDSTNPGESLFPGLGFNPLGGGXXXXNAMAGLFGTGLPDLEQAQQQLAQNPNMIIDMMNTPAIQNIMNNPEFMRSMIMSNPQMRELVDRNPEL-GHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIESMPEGFNHLRRMYENVQEPFLNAT---TMSGNAGGNTGTNPFAALLGNQGVTTQGSDASNNSSTPNTEAGAGNSIPNANPLPNPWGATGGQTTTPGRTNSGGPGLGXXXXXXXXXXXXXXXXXXXXXADPTLGGATPDASQLSQILQNPAMSQMMQSVLSNPQYMNQLMSLNPQLRTXXXXXXXXXXXXQNPDFLRQFSSPEMMQQMMTLQQSLFSQNRNTTSQD-----------------PGQTGAAGXXXXXXXXXTGNNA--GLDLLMNMFGGLGAG--------------------------------------GLSGTTQSNVP----PEERFATQLQQLQEMGFYDRAENIRALLATNGNVNAAVEQLLG 568
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1.32.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR67_ECTSI8.320e-15565.28Ubiquitin family protein, expressed n=1 Tax=Ectoca... [more]
A0A835Z7M7_9STRA1.050e-7444.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6D2I4V8_9BRAS1.070e-4831.75Uncharacterized protein n=5 Tax=Coluteocarpeae Tax... [more]
A0A1S4A5X4_TOBAC1.090e-4832.50ubiquitin domain-containing protein DSK2b-like iso... [more]
A0A1D6JMS0_MAIZE1.420e-4729.12Ubiquitin domain-containing protein DSK2b n=13 Tax... [more]
A0A078F0B9_BRANA6.890e-4729.93BnaC03g47520D protein n=14 Tax=Brassiceae TaxID=98... [more]
I1MMX7_SOYBN9.910e-4737.08Uncharacterized protein n=30 Tax=Phaseoleae TaxID=... [more]
A0A2K1KMH3_PHYPA1.290e-4636.71Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
DSK2B_ARATH4.050e-4632.68Ubiquitin domain-containing protein DSK2b n=17 Tax... [more]
A0A087HDA2_ARAAL1.230e-4432.69Uncharacterized protein n=1 Tax=Arabis alpina TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1contigF-serratus_M_contig1:938192..953150 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.8
Seed ortholog evalue1.1e-133
Seed eggNOG ortholog2880.D7FR67
KEGG koko:K04523
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquitin
EggNOG OGsCOG5272@1,KOG0010@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03051,ko04131
Exons11
Model size2581
Cds size1734
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928778.0282664-UTR-F-serratus_M_contig1:938191..9385261622928778.0282664-UTR-F-serratus_M_contig1:938191..938526Fucus serratus maleUTRF-serratus_M_contig1 938192..938526 +
1690962565.6280742-UTR-F-serratus_M_contig1:938191..9385261690962565.6280742-UTR-F-serratus_M_contig1:938191..938526Fucus serratus maleUTRF-serratus_M_contig1 938192..938526 +
1622928778.2463622-UTR-F-serratus_M_contig1:952638..9531501622928778.2463622-UTR-F-serratus_M_contig1:952638..953150Fucus serratus maleUTRF-serratus_M_contig1 952639..953150 +
1690962565.7798684-UTR-F-serratus_M_contig1:952638..9531501690962565.7798684-UTR-F-serratus_M_contig1:952638..953150Fucus serratus maleUTRF-serratus_M_contig1 952639..953150 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928778.0492435-CDS-F-serratus_M_contig1:938526..9385831622928778.0492435-CDS-F-serratus_M_contig1:938526..938583Fucus serratus maleCDSF-serratus_M_contig1 938527..938583 +
1690962565.6442626-CDS-F-serratus_M_contig1:938526..9385831690962565.6442626-CDS-F-serratus_M_contig1:938526..938583Fucus serratus maleCDSF-serratus_M_contig1 938527..938583 +
1622928778.0674293-CDS-F-serratus_M_contig1:944660..9447931622928778.0674293-CDS-F-serratus_M_contig1:944660..944793Fucus serratus maleCDSF-serratus_M_contig1 944661..944793 +
1690962565.6540437-CDS-F-serratus_M_contig1:944660..9447931690962565.6540437-CDS-F-serratus_M_contig1:944660..944793Fucus serratus maleCDSF-serratus_M_contig1 944661..944793 +
1622928778.0869365-CDS-F-serratus_M_contig1:945790..9460681622928778.0869365-CDS-F-serratus_M_contig1:945790..946068Fucus serratus maleCDSF-serratus_M_contig1 945791..946068 +
1690962565.667933-CDS-F-serratus_M_contig1:945790..9460681690962565.667933-CDS-F-serratus_M_contig1:945790..946068Fucus serratus maleCDSF-serratus_M_contig1 945791..946068 +
1622928778.105216-CDS-F-serratus_M_contig1:946438..9465011622928778.105216-CDS-F-serratus_M_contig1:946438..946501Fucus serratus maleCDSF-serratus_M_contig1 946439..946501 +
1690962565.6820455-CDS-F-serratus_M_contig1:946438..9465011690962565.6820455-CDS-F-serratus_M_contig1:946438..946501Fucus serratus maleCDSF-serratus_M_contig1 946439..946501 +
1622928778.1277823-CDS-F-serratus_M_contig1:947287..9473771622928778.1277823-CDS-F-serratus_M_contig1:947287..947377Fucus serratus maleCDSF-serratus_M_contig1 947288..947377 +
1690962565.6907988-CDS-F-serratus_M_contig1:947287..9473771690962565.6907988-CDS-F-serratus_M_contig1:947287..947377Fucus serratus maleCDSF-serratus_M_contig1 947288..947377 +
1622928778.1433275-CDS-F-serratus_M_contig1:948002..9480951622928778.1433275-CDS-F-serratus_M_contig1:948002..948095Fucus serratus maleCDSF-serratus_M_contig1 948003..948095 +
1690962565.7055767-CDS-F-serratus_M_contig1:948002..9480951690962565.7055767-CDS-F-serratus_M_contig1:948002..948095Fucus serratus maleCDSF-serratus_M_contig1 948003..948095 +
1622928778.1587589-CDS-F-serratus_M_contig1:948548..9487031622928778.1587589-CDS-F-serratus_M_contig1:948548..948703Fucus serratus maleCDSF-serratus_M_contig1 948549..948703 +
1690962565.7227166-CDS-F-serratus_M_contig1:948548..9487031690962565.7227166-CDS-F-serratus_M_contig1:948548..948703Fucus serratus maleCDSF-serratus_M_contig1 948549..948703 +
1622928778.177579-CDS-F-serratus_M_contig1:949632..9498221622928778.177579-CDS-F-serratus_M_contig1:949632..949822Fucus serratus maleCDSF-serratus_M_contig1 949633..949822 +
1690962565.7346427-CDS-F-serratus_M_contig1:949632..9498221690962565.7346427-CDS-F-serratus_M_contig1:949632..949822Fucus serratus maleCDSF-serratus_M_contig1 949633..949822 +
1622928778.1969178-CDS-F-serratus_M_contig1:950279..9503601622928778.1969178-CDS-F-serratus_M_contig1:950279..950360Fucus serratus maleCDSF-serratus_M_contig1 950280..950360 +
1690962565.7534535-CDS-F-serratus_M_contig1:950279..9503601690962565.7534535-CDS-F-serratus_M_contig1:950279..950360Fucus serratus maleCDSF-serratus_M_contig1 950280..950360 +
1622928778.214447-CDS-F-serratus_M_contig1:951675..9519011622928778.214447-CDS-F-serratus_M_contig1:951675..951901Fucus serratus maleCDSF-serratus_M_contig1 951676..951901 +
1690962565.7618961-CDS-F-serratus_M_contig1:951675..9519011690962565.7618961-CDS-F-serratus_M_contig1:951675..951901Fucus serratus maleCDSF-serratus_M_contig1 951676..951901 +
1622928778.2302601-CDS-F-serratus_M_contig1:952270..9526381622928778.2302601-CDS-F-serratus_M_contig1:952270..952638Fucus serratus maleCDSF-serratus_M_contig1 952271..952638 +
1690962565.771344-CDS-F-serratus_M_contig1:952270..9526381690962565.771344-CDS-F-serratus_M_contig1:952270..952638Fucus serratus maleCDSF-serratus_M_contig1 952271..952638 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1.32.1prot_F-serratus_M_contig1.32.1Fucus serratus malepolypeptideF-serratus_M_contig1 938527..952638 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1.32.1

>prot_F-serratus_M_contig1.32.1 ID=prot_F-serratus_M_contig1.32.1|Name=mRNA_F-serratus_M_contig1.32.1|organism=Fucus serratus male|type=polypeptide|length=578bp
MSEVSINVRCSNGEKFTAEIGLDSTVLAFKQKISEKAGVPPERQRLIYKG
RVMKEDQNTLVSYTVEANSTVHLVRSQARTTPAPAPAASGAAASPFGAPG
GGTGGSFPGAGAGSGANPFADMMGSMGGGMDINRMQQQLMSNPEMMASIM
NSPMMEGLLNNPEMLRSIMFSNPQMQQQVMQNNPQLAQVLNDPATMRQYL
EMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEG
MTNNDSAGSARSNNPAPAPASNPSGGPNTSALPNPWAPAGSQASSSAPGS
NASTPSAARSPAAGSNPWATLAAGLPPGAAGPGASQFDPAMMQNLMGNPM
VQQMVNQMAEDPVLMESMIAQNPHLQQAMQANPALREQLPQFMRRMTDPQ
NVQALAQMQQSMQQLQRAGLLPGMPGMPGMPGVGSGAEFGPGLTGLGGFG
NLNLGVPGTPPAAGGLDFSSLLGGQGAGLGAGAGANPWANSSPLASPSST
TTSTGSTNAPAPAPISAPAPVAMPTPPVLANPEERYAAQLAQMSDMGFTD
RAACVRALVASQGNVNAAVERMLGGGV*
back to top

mRNA from alignment at F-serratus_M_contig1:938192..953150+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1.32.1 ID=mRNA_F-serratus_M_contig1.32.1|Name=mRNA_F-serratus_M_contig1.32.1|organism=Fucus serratus male|type=mRNA|length=14959bp|location=Sequence derived from alignment at F-serratus_M_contig1:938192..953150+ (Fucus serratus male)
GAGAGAAGAGCTCGCCAACGACTACGGGGCGCGCCGAGACCAAGCCATCC
TTTTGACATATACCAACACCAACAACAACAGTGTGACGTGAGCCCTGCGG
AAGTACTCGAGCTTTGCCCACCGAGAACCGACCTCTCAGCTGGTTGGAGC
TAGTGATCATCTTCGAAGTAACGCCCTGAAGCCCTCGTTTACATTTGGAG
CTCGGCGACCGCTTACATTTGGACATCGTGACCAGCAATCAACCCGACAC
GGAGTACTCTGTACCTACTTTGTAGTACGAAGTACCTGATACAGCGGGGT
TTCACACATCCCGACACCTACGACCTACCGAAAACATGTCGGAGGTTTCG
ATCAACGTGCGATGCTCTAATGGCGAGAAGTTTACTGCTGAGGTGAGCAC
GGCTGCAAGACTGGTCGTAGAGGTTTGTCTGAGGAACGGACCAGAAGACG
TGGGCGATGCAGCCCTATTTAGTGTCCAGTGTAACAAGAGGTATACCTTT
TTATCATACTGCGTACTGCCCTTATCTGTAAATAGACAACAGCTCCCTGG
CTCTATGGAAGTCTAAAGTTAGACGTTCAATCTGTTGTACACCTGGAAAT
TAACGGGCATTCCAGACTCGTCGCACACGAGGCGAAACCGCTCGTGCGCC
TGTAGCGAAGAACCAACTGTATGCTGCTCCGTCTGCTGAGAGTTTCTTCC
GTTCCGCGTCGAGAGTTGCTTGGGTGTGCACATCAGAGGAACTAAACGAA
AACTCGTGGACAGTTATACGACCTACTTCAAATATCCTACGTTCTGCAAA
CTAACTACAGCTGTACTTCCGTCGTGCTACTTCATGAGGACTCGTGTTCT
GTAAGTTGTGCAAGTTTTGACTGTATCATCTCGCTTACGTCCGATGTTCA
ACGTTTTTTGCCCTCCCCGTTCCGTCCTGAGGAAGCAAAAAAAAAATTGT
CGACTGTAACCGACATCACAAAACTTGCGGCCGATGGGCCTCAACGTGTG
TTGCCGTCCGTCCTGAGAAACGAAAGCAAGTTAGAAATTGTCGACTTCAA
ATCGAACCGCGAAGGCTATTTATTTGTCTTTGACAGCTCACAGCCGGTAC
GGGGACAGCACCGCCTAACATACAGACAAAAAAAGATGGGTCTAAACCAG
CCGATGTTTCCAACCACGCGTATCCATCTTATGCTGTGGATGCTCGGGAG
GTTGCGGTGCGCTCATATTTCTCAATAAACCTACGCAAGAGCGCGATCGA
GAACTGCGAAGAGACTGTGGTAGTTCCCTTGGAGGCTTCTGCAAACAATG
CGGTGTTTACATACATTATCGGTATATAACCCTCCCCGCATGGAAACTAC
GTTGCCAGAAAAATCGATATTCCTGATATCAGAAAAACAGATTTTGTTTC
TGAAGCGAAGATATCGAATACCGCACATTCGTAGGTACGTTAGCTGATTC
CTCTGGTACTTTCGCAACCTCTAAAGCCTACAGTAATCTTAACCTTCTTT
TTCCGTACTGTATACTGTATACAGTATACAGCAGCAAGGAAGCCATGGTA
CAGAAGTACCAAAAAGTAGTATGGCAACAGTTTTCTCTAATCTTAGACTA
CAGCCAGTAGTACAATTCAGACATTCAATACTGCTGCTGTACACATTCAG
TCTCTCCACCACGTACGTATTATTATTAATAGTCCAATTCCCTTTTTTTT
CAGGCTTTTTTTATGCTTTGGTATCCATTATACACGTACTACAGAACACT
AATGTAGGTACGAGTACTGTACCACAGGAACTACGGTACTGTAATTTCCG
CTTTGTCTTTCATCAGCTCATGCGAGAATTTAATCAATGATCAAGCAAGC
TTCCACAAGTTTTGTACCAGGTATGTACTCTGTAAATGTATTGTGTGCTA
ATTCCTTCACCATTAATTTATCGAACCTCAACTCCTGTACATACATAGAT
TACCAATCCAGTACTGTACCACGTACAGTACGAGATCTGCTGGTCAGGAA
AACGATACCAGGTATACTATTTACTATTGTACCAGTAGTACGTAGTACGT
ACTCGCAATCGTTCTAAAAGTCTTGAGTCCTCTTATTTTTTAATGATTGA
TTGAATTGAATTCTCACATAAGCTGATGTCAAAAAGACCATTCGGAAGGA
AAGAACGTACTGGTACGACGTACTCTCCATTCAAAGAGAGAGCGGCAATG
GAATATAACAGCACAAATATGAGGAAGGTTTTCGTGTATCGAAGGCCGAG
GCTCTTCGTTCAATTGTCCCTTGATATGACTTTCAACATGCCCACTTCAT
GCCAATATTATTAGTGGGTGTGGGCATATTAATTGGTCCATGATGACCTG
CCAAGGCAGCACTCGTTCGGAACTACCCTGAGGTTTACTGGCCCTGTGTC
GGCGGACTCTCGGCAGTGAACGCCATCGGTACGTATTTGCATGACCCGCG
CAAGCCTCCTTATTCTCCACACTCATCAAGGCTGAAGATGATATTCACCA
CCGGGATTCGTCCCGCTTTCCGCGACAGGGTCCACTTATACCGTCAACCG
CCATTGGGTCAATGCCGAGTTCATCAGGTCGCGCAATTGCGTACCGATGA
CGTTCACTGCATGGTGACCTGCTAAGGCAGCACCCGTTCGGAACTACCTT
GAGGTTTACTGGCCCTGTGCCGGCGAACTCTCGGCAGTGAACGCCATCGG
TACGCAATTGCGTGACCCGATAAACTCGGGACTGACCCAATGGCGTATGG
CGGTTTCATAAATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGT
AAGCACCAGATTCAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGACG
GGACGGCCGAACCCGTCTCGCGAGACCAAATTCTCAGGCACGCACGGGGA
CAGGGGAATATTATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAA
CCTTACCGGGTTGATCCATACTCTGCTATATGTGATGACCATACATACAT
ACATACATACATACTGCCATACTACTGTAGTCCACCGTTATCGCGCACAG
GGCCAGGTAGTAGTCCTCGGGGTAGTAATGTATTTCGAGTAAACGGGTGT
TGCCTTTTCAGGTCTATCAAAATGGACCAATCGTGAGGTGCGCCGCCTCT
CTTTTTATTGTTCAGAGCGGTAGTTTTACACCTACTCGTACAGTCCTCAT
ACTATATACAAGTACATTTGTTTCGCCGTTGGGTGCCAGCTGGAAAGGTC
TGGAGAGTGACGCCGACACCTTGAAAATCAATACTGCCTTCTGTATCGAA
CATGCCCACTATCAATATAGTAGTACATGTACACAGCGTAAGGCCATCAC
ATACACTGCTGTAGGATTAACCTGGTAAGGTTGCCAATCCTGCTCGTGGT
GAGCTGAACAGGGAAAATGATGTTTTCCCTGTCCCCGTTCGCGCCTGAGA
TTTGGTCTCGCGCGACGGGTTCGGCCGTCCAGTCCCGCGTCAGCCTGCTC
ATCTCCATACTCGGGCTGAATATGGTGCCTACTTTCAAGATTTCTCCCGA
GTTCCGCGGCGGCGTCCATTTATTTATTTAGTGCCTGGTAAGCGATAGTT
GATGTTTCTCACATTAAGCGTATTGGTTGCCAAACCGAGAGATCCACTTT
ACACGCACGTCCATCCTGCTCGTGGTCTCCTGTACGGGGAAAAAAAAAAA
AAAAAAAAATCTGGCAACATCCTcCCCCCCACGCTGTTCGTACGGTGGAA
ATAAAATAAATATAAAAACACATTGGGCGCGTACATTGGAGAGAACAACA
AGGCAGGTAGGTGGCCAGAAAGCGACCTATCTGCATGCATGCCTAGGTGC
TACGCAGGTTTCGGCCCGTTTCGCGTCCGTACAGGATTCCCTCGACTCGT
CAACTAGGCGAAATTGGTTTCGCTTCGCAGGCTCTACGCTTCCGTGTACT
TGTACGATCACACCTTTCCCGGTCTCGTTGTCTCTTCTCTTCTCTTCTCT
TCTCTTCTCTTCTCTTGGCGAATTCTCGCCGCTTCTGCCTCTTCCTTCCT
CCGCGCAGCTATTAAGCTCCTCCCCCCTTCCGTGAGTGTCTCAACCCAAA
GTGGGTGTGGGGAAAGAGAGGCCCATCAATAATTGGTTCGTGGTGATACC
TGAAAAGGCAGCACCCTTTACTGGAACTACCTTGAGGTTTACCGGCCCTA
TGACGACGAACTCTCGGCGTTGAACGCCATCGGTATGCAAGTGCGTGACC
TGATGGACCCGAGACTGATGCAATGTCGTATGGCTGTTTAAATTAGTAAA
TCAACGCCGCCGCGGCAAGCCGGAGGAATTCCGTGAGCTAGCGCCATATT
TAGCCGGAGTGTAGAGAATGGGCAAGTTAGGCTGTCGCGGGACGGGACGG
CCAAACCCGTCTCCCCCGAGACCGAACTCTCAGGTGTTAATCCGTACTCT
GCTGTATGTGATGACCTTACTGTAGCACGCTCAAAGGCACTACAGCTTCC
AAGTATAATACTACAGTACGAGCGAGCGCTGGAGGCAAGCACAACACGTA
CAAGCCGTGAGCACGTTTGTGGTGGTGGTCCATCGGGTGCAACTGCTGCA
CCCGCCCTTGACAAGCGACAGCCTACCGACCTACATATAATGTACTATTA
ATAGTAGAACAGAACATACGTGCTGCGAAACAGAAACTCTTGATCACTGC
GATGATCCGTGGAAACAACGTGTTACATTGTTTGTGTATGTGTGCGCTGT
CATCCCATTTATTCTGCGTCAGACTTGTGGACGCACCAGCCGGGGTCGCA
CAGGAGGAAGGTCACACAGGATTTCTCCACTTTCCTTCTGCGGTGCTTGC
CTTGATTTTTATCGCGAGAAGGATTCAGCCATCCCGTTTCCTCGTCGGCC
GTGAAGTCGAATATTTTATTGATTGATTGAATTCTCACATAAGCTGATGT
AAAAAATCCAGCCCGTGGTCACAAGGTGGAAAAATACCTTTTCCTTTTTT
TCCTTTTTTTCCTTTTTTTCCTTTTTTCCTTTTTTTTCCCTTTTTTTTCC
CTTTTTTTTTCTTTCGTGAGGAAAAATCTCAGTTTGTGTGACTGCACCAA
GATTCGACGTCACGTCTCAACGTCAGAAGGTTTCGAGTTTACCGACTGAA
TCACCAGGGCGACCGGTTCTGTTTTACTATGCTCTCATTCTTTTTACAGC
AGTATTTGTAGTCGTTTGTTCTTCACAATAGGTAACCGATCGGGCCTCAA
CCATATTACTACGTACAGCATACCTCTACGAGAGAGTATTTATGTATGGT
GACACATATAGCAAGAGTATGGATCAACCGGGTAAGGTTGCCAATCCTGC
TCGTGGTCAGCTAAACAGGGAAAACGAATATTCCCCTGTACGCGTTCTTG
CCTGAGAATTTGATCTCGCGAGACGGTCTCAGCAGTCCCGTCCCGCGTCA
GCCTGCTCATCTCCATACTCAAGCTGAATCTGATGCTTACAATTTTTTCC
CTAGATATTAATAATAATAAAAAATTACCATTCACTATAAGATAATAAGG
GATTTCTCCCGAGTTCCGCACGGCGTCCATGCCACACGCCATCGGGTCAG
TCCCGAGTTTATCGGGTCACGCATTTGCGTACCGATGGCGTTTACTGCCG
AGAGTACGCCGGCACAGGGCCAGTAAACCTCAAGTAGTTCCGAACGAGTG
CTGCCTTGGCAGGTCACCATGGACCAAATAATATGCGCCTACCCGCTATT
GGTATGAAGTGGGCATTTTGAAAGCACCTACTCATTACCGGGTACGAAAT
ATCCTTTATATTAAAGGATGTATTTGTGTTTGTATGGTCATAGTCCTCAT
CACGTGTAGCAGAGTAGGGATCAATGGGGTAAGGTTGCCAATCCTGCTTG
TGGTCAGCTGAACAGGGAAGATGTTTTTTTCCCTGTCCGCGTTCGCGCCT
GAGAATTTGGTCTCGCGAGACGGGTTCGGCAGTCCCGTCACGCGTCAGCC
TGCTCATCTCCATACTCGGGCTGAATCTGGTGCTTACTTACGGGATTTCT
CCCGAGTTCCGCAGCGGCGCATAGTTTTTATTTATGCTGCCATACGTAAA
TTGAGTCAGTCACGAGTTTATCGGGTCACGCAATTGCGCACGGATGGCGT
TCACTGCCGAGAGTCCGCCGACACAGGGCCAGTAGTCCAGTAACGGGTGC
TGCCTTTGCATCACCATGGACCGATTAAAGGTAGCCATGCCGTATTATGC
TCCCGTTCTCTGGCTGGGCTGATGATTGTGCCCTTAATGTGGGAGATGCC
TGACATGCGCCCAAATCTATTGATACGTGAACTGTGGGGTTTACGGATGG
TACTTCTTCGGAGGGCACCCAGAACGTTGAACATTCTTGACCACACGATC
AACCGCTGCGAGAATTGAAGACTGTATACACAACTGGCTTGTTCGTGCGC
GTCTATTTTTGGAGCGCAGATTGGCCTTGACTCCACCGTCCTGGCCTTCA
AGCAGAAGATCTCCGAAAAAGCGGGAGTTCCACCGGAGCGACAGAGGCTC
ATCTATAAGGGGAGGGTGATGAAGGAGGACCAGAACACCCTCGTCAGTTA
CAGTGAGTTTTTTGTTGCAAAGACGCCTAATAATGTCCCGACACGTGTCA
TTCCGTGCCCAAGGGAAAATAAACGCTGCTGCTGCTGCTGTCTGCTCGAG
GGATGTGGGGTTTTGGGGAAGTTGAGTGGTTTCTCTCTTTCCCGTCTGTC
GAGAGAGAGCTATTGGGCTCTGTAAGGAGAACGTGTCTTCCTCCTTAAGA
TCTTGCTGTTTATACTTGTTGGATGTCCGTCTGGGTCTATATCTCGTTGT
GGGGGTTTGGATCTATCTGATCCCCGTAACGAAGTTATTGATACTCGATG
TTCTGTTGGAGTGGAAAAAACGACCAGCCCCCGCTGACGTGGCCTTCGAA
AATCCACGCAGGCAGCAACAACGGAGACACGATTATACGACGGATGGATA
CAGTTACCAGCTCTATTCTGCATCTACAGACCTTGTAAAAAGTTAGCTCG
GTTGCCGTTTGTTTTATTATAAAAAAATGTCTGGAAGTAGAAGTATACAA
GTACGTGCGAGTTTATATCTCTATAATAGTGTACACTTCCCCACGGAGTA
CACCTCGATAATATTATTATTACTATTTATAGGCCCACGTACGTAGTTTG
TAAATGTTGCATTTTTATTGTGGACTAAAGAAGACTCCGTAGAGCTACTC
CTGTATTTTATTTAAGCGTTAAATCAGTCGTTCCTAAAGAAGAATATTTC
GAACACGGAAAGTTTTTTAATAACATACGGAGGCGTCGGGTGTGTGGGGG
GGTGTGGGGGTGTGCGCAAGAAACGCGTGAGAGTCCACCTTTGCCGAACA
ACCTATTGAGAGTCCTATGAGTCCGCTGGCAAAAGAGCAAGTTTACCTCC
AAAATTATCCCACTACGAGCATCTCCTCTCGTCCTTGAAAACATATGCAG
GGTCGGGGGGACACACTGTGTATTTACCTATTATGGGTGTAGCTCTTACC
TTTTGCCTGCACCCGATCCCTTTTCGCCGCCGCCACCGTGTCCCCTCAGC
CGTCGAAGCCAACAGCACGGTGCACCTCGTTCGTTCCCAGGCACGAACAA
CTCCGGCTCCAGCGCCCGCTGCGTCTGGTGCAGCTGCCTCGCCGTTCGGT
GCTCCTGGGGGTGGGACGGGAGGCTCGTTCCCTGGGGCTGGGGCAGGATC
TGGGGCGAACCCGTTTGCCGACATGATGGGGAGTATGGGCGGGGGCATGG
ACATCAACAGGATGCAGCAGCAGCTCATGTCCAACCCCGAGATGATGGCC
AGCATCATGAACTCTCCGATGATGGAGGTAATATATGCATTTTGAAGAGG
CCCGGTTTCGTTTGGGGTGCGCAGCAGGGTTGTGGATTGGGCTGGATGGG
ATGGAAGGCAGCAGGAGAGGCAAATGCTCACGATGTGTGATGTAACCCTA
TCGACCGTTGCTGGAATTGAGGGCGTAAATATTGCGGGGAAATGAATCAA
GCATTCCCTTTTTCTCTCTACCGCTGTTGTTAACGGGGCAGCAGCAGCAA
CAGCAGCAACACCACTTGCCACAGCAAGTCTGTGGTGGGGGCAAAGACCC
ACGCGCCTTACCCCCTTTTTGTCCGATCAAACTATTCTCCTGAAGATCGA
TCCGATTTATGACTTAATTGATGCCTCATCCTCCCGCTTGATACCAGGGA
TTGCTCAACAACCCGGAGATGCTGCGAAGCATCATGTTCAGCAACCCCCA
GATGCAACAGGTGCGTTTGTGACTAATACCCCCCCCTCCCCCCCCTCCCC
TCCCCCCCCTTTTGAAAACAAGTTGAGATCGACCACGTACAGCAGCGCAC
GTCAGATCTGTAATATAGTTTCTATGTACCAGGATACGATGTATACTGTA
CATAAGTTCAATATACCCATGTCCAGGGAATTCTAATCCGCTGCCTCCCT
CAACTCCCTTTGTAATGTGGAGTTCTCATGACCACAGGGTCAGGGTCATG
CTATTGAAAAGGTAATACACCTGCGTATCGTAAGCAACGCTTGCCTATGG
AAAGACCTCTTGCTATAGGCTTCCAAGAATCTTTTATAAAAAAAGCGGAG
CCGTAGCATATGATTTCCTGCCTACAGTAGATGATGTGTTGACTCTAGAT
ATTTTGACATATGAATGACTGGGGGTTAGAGAGGGGGAAGATCTGCTGCT
GTCTCGCTCAACGTGTGCTGGTGGACTTTTCGATCGCCCCCCTCTTGACG
CAAATTGATGTACGTGTCTATGGAAACTTTTATAACTGCTCAACCACTCG
TATATTTCACGCGAGCGTGATTCCGGTATGGTTTGGTTTGGTTTGGTTCC
GTCTATCTTGTGACCACGGCTGGATTCGTAGCGGATCAGTTAATGTGAGG
TGTACAACAGCAAAACTGCCGTGAAGTTTTCCATCCATGCATCCGGTCTA
TCCCCCCCCCCCCTTCGATCACGCCTCCTTATTATCCTCTTTTCCTTTTG
TCCTCTTTCATCGAACATATTCAACCTCTCTCGCTGGGCGGGAGAGCAGG
TCATGCAAAACAACCCCCAGCTGGCGCAGGTCCTTAATGACCCCGCTACA
ATGCGCCAGTACCTCGAGATGGCTCGCAACCCAGCGGTGAGTCGTTGATT
TGTTCTCCCTACATGTTATTCGCCTCCCGTTTTTTTCGCCTCCCTTGGTT
TTGCCGCGATTTTGTTAAAAAACATTACATTGTGTTGCGTAGTGTCAGGT
CTGCAGGGAGTTTTGTCATAAACGAGCGACTGATAACCGCTCTGTCGTAT
GTAGGTCTGGTTGACTGCTGTCCGACTGCGATTCCATCGCCCAGCTCGAG
TTGAGGCAGTGGTTCTTTTTGTGAGGTTTCGAGCTGGGATCGCTTGCTGT
ACGTGCCCCCCTGCCTCCAACACAGGAGGCGCAATTATTTTGGTGAACGA
GAGTAGACCAAGCAAAAATGAGTGACATAACCAGCCAATCAGAGTGACTC
TAAAAGTAATGCTTGAAACAAGCAAAGAAAGAAGAAGCCACACGGGCAAG
AAAGCCAAATCACGGTGGCGAAAAAGACTTAAACGGCGAGCCAATCAGGG
GGGGGAAAGCGAATCGGTCTCACCTCCCCACCAACCGTCCAACTCTAATG
TAATAATACTACATACCCAGTACCTGGTATGTACAGTGCCCTTTCAAGGA
GTTCCGTGGCACGACACGCTGAAACCAATCGTGACGCCTTTACTGTTTCG
TGAACGAGCAGGCGATGGAGCAGGCTCGTCGCAGCCAGGACCTGATGATG
AGCCAGATCGAGAACCAGCCGGGAGGCTTCAACGCGCTCCGCAGGATCTA
CGCGGTGGGTTTCGACCTGTTACTGTCGTCTCGGCCGGAAGTCAAAACGC
GTTGTTGGGGGGGGGCGAGTGAAGCTCTGTTGTGGGTAAAACCAAATAGA
GAAAACCAAGTACGATCTTACTGTAACGAGGTAAATATGAAATTTGGGAA
GAAGGGGGGAACCTTTATGGCGCATTGTCGCGCACTTTGGCGAAAAAAAA
TATCTCCACGTACGCAGAAAAAAAAGTTAGTTTGGCGCACTCAAATCATT
CGCCCGGAGTTCCTGTCACTGTTGTAGAGAGAGTCTTTTACGTACGAAAG
ACTTTATTGTCTACAAACATAATCCTTTTCGTTTCTTTCACGTCGTGACA
CGATTGATCCGTCCCCCATCCATAATGCCTCCTTGACTGTTAAACTCCTT
TTCTTTATCCTCCATTCTCTCCCCCCCCCCTCGGCGCTCCAAAACTAATA
AACGCAGGAAGTACAAGAGCCCATGATGCAGGCCAGCGAAGGAATGACCA
ACAACGACAGCGCTGGCTCGGCGAGATCGAACAATCCCGCCCCGGCACCC
GCGTCTAACCCGTCTGGGGGACCCAACACGTCGGCGCTGCCCAACCCATG
GGCGCCCGCAGGGTGAGCAAGCGAGACTCTGGTGATTTTCCTGTGAATGT
CGGAAAGGGGACGTGGGGTGATCACGGGAACGTGGATAGGAAAGGAAACG
GTAGGCCGACAAAGGGGTGGTACGGTCTGTGTAATCGAGTTCGTTCCTTC
GCGCGTTCCTGATCGCTTCTCGACCCATTACATGTGTCCACGATCCACGT
TAAGCTCGTATGGTGCAACACTGACTTGTTGTAAAGTTTGAACTTGGGGG
GGAGGAACGCCTCCTCGAGATACAGGGGGGGTATATTCCCACCCCGCATA
CATCTCGACTACGAGTTCAACACTTATATGCAGACTGCAACGCTTAATGC
AGACTGCTGAGGGAAGAAACTGCCAACTCTGCAGTTAACCAGAACGTGTA
AGCGTGTGTTTAAGCGTGTGTATTTATTAAATTGCAGTGTATGTGTGTAA
GCGTCTGTGTGCGTTTGTGTAAGTGTATAAGTTTTGTTATCATTTCTCAC
TCGGGAGTATTGTGAGTTGGGGGCCCGCCGTCCTCGTGCCGGGACGCGGT
TAGTGACTTCGTTCAGATCAGCGTTTGTCGCCGGGGGACAGGGCAGGGTG
CAGGGTATCTGTGGGTGAAAACCTTTTGGCGCGATCGTGAGAGTCATCCT
ACTCTGTCGAAAATGCATGGTGCATCTGCTATTTTTGTCTCTGTTCATTT
AAAATGAGCCTTGATATTGATAGGTCTCTCATCACCACCAAGCGAAACTA
TCCAGAGTAATAATAACAAAAGTTATACTTGGTATAATAATAATGATAGT
AATGTATTCATGTTTTTTCAAACTATTAATATCAAAAAGATTAGAGCCCT
AGTGTTCTAGTCGGCTTTGAAGGTCCTATCCAAGACTAACCAACACCCCC
CCCCCCCCCCTACGCGTCCCTTCCTTTTATGGGAAATTCAGGAGTCAGGC
CTCGTCGTCGGCACCTGGCTCCAACGCGTCGACACCTTCGGCAGCTAGGA
GCCCCGCGGCGGGTAGCAACCCGTGGGCCACATTGGCCGCCGGTCTTCCG
CCGGGGGCGGCTGGGCCTGGGGCGTCCCAGTTCGACCCGGCCATGATGCA
GAACCTCATGGGCAACCCGATGGTGCAGCAGGTGCGTGTCATTGTGGAAT
TCGGTGTTGTGATCGTTCTGGCCCAGCTGAATTACCGGTCCTATCCCGTG
TGCTTGACCTCCTCCCGGCGCATCGGTCGGTCTCGAAAGTAGAGTTTTTG
GTGGCGACGAGGCACTCGTACCGGCGGAGATGGGAATTAAATATCACTCC
CCCCCCCCCTACTAGTTTGTAGATAAAACTGTCGGCATCTCTCACGTATT
GTAGCAAGCGCTGTCTTCGGGATCAGTGATGGGTCTGATATGTGTTTTGT
TTGTAATATGTGGTTGAGCGAGAACCACAAGTAGGGTTGGAGATCGGCCC
AGTCACCATACACAGTATTGTAAGTCCAGCATTTAACCCGCCCCCCTCCC
TTAAACCCCGTTATTCATCCCCGCATAATCCGCACGCATTTCTTGGATGT
TGAACTCCCACCTGTGGACCGGGGATGAACAATTACAGATGGTAAACCAG
ATGGCGGAAGACCCTGTGCTCATGGAGTCCATGATCGCCCAGAACCCGCA
CTTGCAGCAAGCGATGCAGGTACACTATACATGTTCATGCCTAGTCTATG
CAAATGTGTATAGGTAGTAGTGTACACTATACACCCTCTGTTACACCATA
GACAGATTTTTCTAGTACATCAACGTAAATGTGTAGGAGTAGCTACACCC
CGAGAAGCAGATATGGCATATAATGTTTAGCATAAGGTGCAGTAGTCAAA
CTAGCTTCCTTTTCTATTTCTTTTCGAGCGATCCAGCTTGACCACGAATC
GGGTTAACAACGGTGTGTTTCAAGTGTAATTACATACAGTGAGTGTACCC
GAGACCAATCGGCTGATGTGACGAAACAACAGTCTTCATCGCCTATGTAA
CAGTACAATATTACCATGTACGATGTTGTACCACTTTGTTTTTGTATTAT
TTTTGATATTTGCATGATGTCGCTGTATGGCGATTCGTGTCAGTTTACAG
TATAACGGTGGGTTTGTCCCCTACATTACACCGTTGACCCAAGGTTACTA
CCATCGGGGAACCCGTTAAAATGCCATGAGGAGGTTTTGTATTTGCAGCC
TCCGATCCCACCTAAACGTCTTGATACTTTTCCCCCCTTGACTCGGGGGT
GCTCAGAAAGTCTAGGCGCGTTTTGATTTTTCTGTAAACATATATACGTT
ACGTAGTCATGTGTGTCAACTGTTTCATGAGTAATCGATTTTTTTATTGT
GTGCCAAGTGTTTTTGGCCGTCTTTGTGTTTGTATGGGAGCAAAGGTAAT
GGATGTATCAGTACCCTCTCGTGTATGTACGACGGCAAATTTGTGTTAGG
GGAAGCGTAAGCTTATGTGTGTAATGCAGAGTACGTTATGTACTGAATCG
GCACTGTCCACTCGGCTGGATTTGATACTTTTACTTTTGACCTCATAGCT
CATAGGAAACATATGCAATCCTCGGCCAGTGCATGCAGTAGTAAATTTCA
ACTTCTCTTGGCCTTTGGTCGATGGGGTGCATTGGCCCTAGGGCCTCAAG
TGATACACTTTGTTTGTTTTCCTTCTTTTTATTTATTTGTATTTCTATAG
ATTGTGATTGTTTGTTTCTCTCATCTCGCGGCGACCGAATGTGTAATGTC
TTCTGGTCTCTCTACTATTAGTCTATCGCATCTCTCTAGTCTATCGCACC
CGAGACGTCTTCCCGTCACAAATATGTAATGAATTGACTTACCACATCGA
ATATCCCGCAACCCGACCTATCGTCATAACTCAAAGTAAATACATGTGCT
GGTAAAACGAACAACTATTGGACCCCGAATCTGAAATATTGCGCGTCCCC
GCTCCCCTCCTTTCTCCTCCCGCCTTTTTCTCAGGCAAACCCTGCCCTTC
GGGAGCAGCTGCCCCAGTTCATGCGTCGAATGACCGACCCTCAGAACGTT
CAGGCGCTGGCTCAGATGCAGCAGTCGATGCAGCAGCTGCAGAGGGCGGG
GTTACTGCCCGGGATGCCTGGGATGCCTGGAATGCCCGGGGTTGGCAGCG
GCGCGGAGTTCGGGCCCGGGCTGACCGGGCTGGGTGGCTTCGGCAACCTG
AACCTCGGAGGTGAGATGCGTCGGTAATGGAGGCAAGATGGAATTGCGAA
GAAGGGCGTCCTCTTCCGTCCTGCGAAGATCATTTTGCGTGTCAGCTGTA
CTTACGTACGTAAAAAAAACGCGGTTCTATCCGATCGTTCAATGTATATC
GATCGGAGCGTGTCAATAATCACACTACATTATACTTCGAAGTACTGAAC
TGAGCTGGGAAGCATTCTTCACATCGAGTGGAAAGTCTTGTGCACTCGCA
CACAAGAAGCACGCACACGTGCAATGTGAATCGACGGAAACTTGTCCCCT
CTCTCTTCCGCTTGCCCCTCCTTTGATCCACTTCCTTATGTATAAACCCT
ATCCATTGCTCTCATTTGTGCCTATTTAGTACCAGGAACTCCCCCCGCAG
CAGGCGGGCTGGATTTCTCCTCGTTGCTCGGCGGGCAGGGGGCGGGGCTT
GGGGCCGGAGCAGGGGCCAATCCGTGGGCTAACTCCTCTCCTTTGGCTTC
GCCGTCCTCTACCACGACCTCGACGGGGTCCACGAACGCGCCCGCTCCCG
CGCCGATCTCGGCGCCGGCTCCCGTCGCGATGCCAACACCTCCGGTCTTG
GCAAACCCGGAGGAGAGGTACGCGGCCCAGCTCGCCCAGATGAGCGACAT
GGGCTTCACGGACAGGGCGGCATGCGTGCGCGCTCTTGTTGCGTCCCAGG
GTAACGTTAACGCGGCAGTGGAGCGCATGCTGGGCGGCGGCGTATGAGTG
TACAGAACGGCGTACTTTTCTCTTACTCAGGATTATTTATTGTCTCATGA
AGTAGCATAGGGGCGAGGGAGGGAAGGAAAAGGAGAGGAGTGGAAGAGCG
TAGAATTCAAGAACGTTTTCTTGGCGCTGGTTTTGTAGAGCAGCTGATGG
TGTCATGAGAGGGATGCGTCGTGGTATTCCTTGGATGAGTCAAGGGCCCG
TGGGGCTGACTGTGACACTTCACTCGAACAAGGAGGGTAGGGTTGTGTGA
TGGGTTTTTGGAGTTTTGTTCTTTAGGGATGTTTTCCTGATTATTCAACG
CCCTGTGATATGGCAGCATAATGCATTGACGCGGGGCGACCGGAACCATC
GGCCTTAAGTAGGTTTATCGATTTGCGTACCCCTGTCTCAATATTTTCGT
TCCTACTCGTAGTCGTTTCGTTTTTCCCCCGACCGCCACCCTCGATCGAC
GCGTCGTCCTGCTCACCACGCACCCCATCCCGCACCATAGCGCAGCACCG
TAGTACTTT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1:938192..953150+

>mRNA_F-serratus_M_contig1.32.1 ID=mRNA_F-serratus_M_contig1.32.1|Name=mRNA_F-serratus_M_contig1.32.1|organism=Fucus serratus male|type=CDS|length=3468bp|location=Sequence derived from alignment at F-serratus_M_contig1:938192..953150+ (Fucus serratus male)
ATGTCGGAGGTTTCGATCAACGTGCGATGCTCTAATGGCGAGAAGTTTAC
TGCTGAGATGTCGGAGGTTTCGATCAACGTGCGATGCTCTAATGGCGAGA
AGTTTACTGCTGAGATTGGCCTTGACTCCACCGTCCTGGCCTTCAAGCAG
AAGATCTCCGAAAAAGCGGGAGTTCCACCGGAGCGACAGAGGCTCATCTA
TAAGGGGAGGGTGATGAAGGAGGACCAGAACACCCTCGTCAGTTACAATT
GGCCTTGACTCCACCGTCCTGGCCTTCAAGCAGAAGATCTCCGAAAAAGC
GGGAGTTCCACCGGAGCGACAGAGGCTCATCTATAAGGGGAGGGTGATGA
AGGAGGACCAGAACACCCTCGTCAGTTACACCGTCGAAGCCAACAGCACG
GTGCACCTCGTTCGTTCCCAGGCACGAACAACTCCGGCTCCAGCGCCCGC
TGCGTCTGGTGCAGCTGCCTCGCCGTTCGGTGCTCCTGGGGGTGGGACGG
GAGGCTCGTTCCCTGGGGCTGGGGCAGGATCTGGGGCGAACCCGTTTGCC
GACATGATGGGGAGTATGGGCGGGGGCATGGACATCAACAGGATGCAGCA
GCAGCTCATGTCCAACCCCGAGATGATGGCCAGCATCATGAACTCTCCGA
TGATGGAGCCGTCGAAGCCAACAGCACGGTGCACCTCGTTCGTTCCCAGG
CACGAACAACTCCGGCTCCAGCGCCCGCTGCGTCTGGTGCAGCTGCCTCG
CCGTTCGGTGCTCCTGGGGGTGGGACGGGAGGCTCGTTCCCTGGGGCTGG
GGCAGGATCTGGGGCGAACCCGTTTGCCGACATGATGGGGAGTATGGGCG
GGGGCATGGACATCAACAGGATGCAGCAGCAGCTCATGTCCAACCCCGAG
ATGATGGCCAGCATCATGAACTCTCCGATGATGGAGGGATTGCTCAACAA
CCCGGAGATGCTGCGAAGCATCATGTTCAGCAACCCCCAGATGCAACAGG
GATTGCTCAACAACCCGGAGATGCTGCGAAGCATCATGTTCAGCAACCCC
CAGATGCAACAGCAGGTCATGCAAAACAACCCCCAGCTGGCGCAGGTCCT
TAATGACCCCGCTACAATGCGCCAGTACCTCGAGATGGCTCGCAACCCAG
CGCAGGTCATGCAAAACAACCCCCAGCTGGCGCAGGTCCTTAATGACCCC
GCTACAATGCGCCAGTACCTCGAGATGGCTCGCAACCCAGCGGCGATGGA
GCAGGCTCGTCGCAGCCAGGACCTGATGATGAGCCAGATCGAGAACCAGC
CGGGAGGCTTCAACGCGCTCCGCAGGATCTACGCGGCGATGGAGCAGGCT
CGTCGCAGCCAGGACCTGATGATGAGCCAGATCGAGAACCAGCCGGGAGG
CTTCAACGCGCTCCGCAGGATCTACGCGGAAGTACAAGAGCCCATGATGC
AGGCCAGCGAAGGAATGACCAACAACGACAGCGCTGGCTCGGCGAGATCG
AACAATCCCGCCCCGGCACCCGCGTCTAACCCGTCTGGGGGACCCAACAC
GTCGGCGCTGCCCAACCCATGGGCGCCCGCAGGGAAGTACAAGAGCCCAT
GATGCAGGCCAGCGAAGGAATGACCAACAACGACAGCGCTGGCTCGGCGA
GATCGAACAATCCCGCCCCGGCACCCGCGTCTAACCCGTCTGGGGGACCC
AACACGTCGGCGCTGCCCAACCCATGGGCGCCCGCAGGGAGTCAGGCCTC
GTCGTCGGCACCTGGCTCCAACGCGTCGACACCTTCGGCAGCTAGGAGCC
CCGCGGCGGGTAGCAACCCGTGGGCCACATTGGCCGCCGGTCTTCCGCCG
GGGGCGGCTGGGCCTGGGGCGTCCCAGTTCGACCCGGCCATGATGCAGAA
CCTCATGGGCAACCCGATGGTGCAGCAGGAGTCAGGCCTCGTCGTCGGCA
CCTGGCTCCAACGCGTCGACACCTTCGGCAGCTAGGAGCCCCGCGGCGGG
TAGCAACCCGTGGGCCACATTGGCCGCCGGTCTTCCGCCGGGGGCGGCTG
GGCCTGGGGCGTCCCAGTTCGACCCGGCCATGATGCAGAACCTCATGGGC
AACCCGATGGTGCAGCAGATGGTAAACCAGATGGCGGAAGACCCTGTGCT
CATGGAGTCCATGATCGCCCAGAACCCGCACTTGCAGCAAGCGATGCAGA
TGGTAAACCAGATGGCGGAAGACCCTGTGCTCATGGAGTCCATGATCGCC
CAGAACCCGCACTTGCAGCAAGCGATGCAGGCAAACCCTGCCCTTCGGGA
GCAGCTGCCCCAGTTCATGCGTCGAATGACCGACCCTCAGAACGTTCAGG
CGCTGGCTCAGATGCAGCAGTCGATGCAGCAGCTGCAGAGGGCGGGGTTA
CTGCCCGGGATGCCTGGGATGCCTGGAATGCCCGGGGTTGGCAGCGGCGC
GGAGTTCGGGCCCGGGCTGACCGGGCTGGGTGGCTTCGGCAACCTGAACC
TCGGAGGCAAACCCTGCCCTTCGGGAGCAGCTGCCCCAGTTCATGCGTCG
AATGACCGACCCTCAGAACGTTCAGGCGCTGGCTCAGATGCAGCAGTCGA
TGCAGCAGCTGCAGAGGGCGGGGTTACTGCCCGGGATGCCTGGGATGCCT
GGAATGCCCGGGGTTGGCAGCGGCGCGGAGTTCGGGCCCGGGCTGACCGG
GCTGGGTGGCTTCGGCAACCTGAACCTCGGAGTACCAGGAACTCCCCCCG
CAGCAGGCGGGCTGGATTTCTCCTCGTTGCTCGGCGGGCAGGGGGCGGGG
CTTGGGGCCGGAGCAGGGGCCAATCCGTGGGCTAACTCCTCTCCTTTGGC
TTCGCCGTCCTCTACCACGACCTCGACGGGGTCCACGAACGCGCCCGCTC
CCGCGCCGATCTCGGCGCCGGCTCCCGTCGCGATGCCAACACCTCCGGTC
TTGGCAAACCCGGAGGAGAGGTACGCGGCCCAGCTCGCCCAGATGAGCGA
CATGGGCTTCACGGACAGGGCGGCATGCGTGCGCGCTCTTGTTGCGTCCC
AGGGTAACGTTAACGCGGCAGTGGAGCGCATGCTGGGCGGCGGCGTATGA
TACCAGGAACTCCCCCCGCAGCAGGCGGGCTGGATTTCTCCTCGTTGCTC
GGCGGGCAGGGGGCGGGGCTTGGGGCCGGAGCAGGGGCCAATCCGTGGGC
TAACTCCTCTCCTTTGGCTTCGCCGTCCTCTACCACGACCTCGACGGGGT
CCACGAACGCGCCCGCTCCCGCGCCGATCTCGGCGCCGGCTCCCGTCGCG
ATGCCAACACCTCCGGTCTTGGCAAACCCGGAGGAGAGGTACGCGGCCCA
GCTCGCCCAGATGAGCGACATGGGCTTCACGGACAGGGCGGCATGCGTGC
GCGCTCTTGTTGCGTCCCAGGGTAACGTTAACGCGGCAGTGGAGCGCATG
CTGGGCGGCGGCGTATGA
back to top