prot_F-serratus_M_contig1492.3388.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1492.3388.1
Unique Nameprot_F-serratus_M_contig1492.3388.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length897
Homology
BLAST of mRNA_F-serratus_M_contig1492.3388.1 vs. uniprot
Match: D7G4V8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V8_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 9.090e-57
Identity = 226/644 (35.09%), Postives = 297/644 (46.12%), Query Frame = 0
Query:  124 GNPVAVQNGAGSRYRQFILQRLPSLHHLDLKRVRNDDQSFSSPSQPATATSWTTCKNSSSDTKTITNEATLPGLKNIHENRRIKDDHGSNTSPRRVIERTTHVCAMKEGRRWSSEGTMGND---DARQYQCGTGAWMVTPRA---PGGTSGTSSYFSP----------CRDGKRNSGL-----------PEERCKQTGGVPAGH--EKIRQDEIYAGCTQVPF--ATIRCAGMESVGITGN---LAIKESEAVSAKVSQAGREDRETIALKERGGAIDAARKCWERRKKCSGASGTRRQTRHSSSAGTCTCPGGSNRCNHRTLPTTISNSTIPHNQSDLHPAFSSTCS--FVPP--------------DRRGFSTSKSEGVSGGSSANTTGTDLSTRNGRRSKDQDRSVSVAPGGMGYFELEQRVPEDRVRLEAACALEPGV-------TLTVYGNVWRWLSDEKVCLLKEKVFEVQFLYVHVDSVARKAAAIAQTFLNLTSLRLLDNDIRSFKQLEQLRPLVANLLLLDLGHNPVATSASEVARQAWVQAQGPRLRLATASH-------------ERIHVGPEEQ---LERWNCSSHEHLRSEGSNQALPPPLVERDTLLPHEATSGSKNAEISSGSRYSVPA 694
            GNPVA QNG GS YR +ILQ LP+LHHLDLKRV +  QS S           TT   S+ D +      +  G  N        +  G++    R    T+       G   S+ GT  N+   D      G G+     RA   PG     SS  SP           R G    GL           P++    + G   G   E++ Q  + AG   +    ++ R A  E V   GN    A +  EAV+ K ++  R++RE  ALKER  AI+AAR+CWERR    G S T R    SS   T T    ++R     +    ++S      +  +PA SS      VPP                R  S+S + G      A T G       GRRS +  R  S++ GG+GYFELEQR+  +R+ +    A   GV       TL VYG+VWRWL D KVC L+E+V E +F  VHV SVARKA+ IAQTF NL+ L+LLDNDIRS +QLE+LRP++ NL  L LG NPV  +ASE A +AWV+ QGP + L +  H              R +   ++Q   L   + S  ++           PPL    T  P   T GS NA+   GS   VP+
Sbjct:  263 GNPVAGQNGLGSSYRSYILQHLPNLHHLDLKRVTDHGQSISHQGSDGNLAPPTTRTASADDAR-----ESRGGGNNGRSRTAFHEAMGNSGKGSRKPSGTSRTG----GNGVSTSGTNRNERSNDGFPVLLGQGSADTQSRAEHHPG-----SSLSSPQXXXXXXXXXSRGGDDPRGLHRAGPVMSAPAPDKGAIGSDGRVRGGAWEQLSQQTMAAGECAITGGDSSTRAARKEVVLAVGNGMSRAAEAREAVALKRAKTDRDEREKTALKERREAIEAARECWERR---GGGSITSRARHRSSRDSTSTGKDNTSRKTSAHVKPPPASSPSCSAPTGPNPADSSNTGGGAVPPRPEPPXXXXRSPTXXXRRTSSSANTGSEVAGVARTGG----GVGGRRSGNAGRRGSIS-GGVGYFELEQRLRHNRMGVGDVAASGGGVPGGAGGITLKVYGDVWRWLGDGKVCSLREQVVEARFSLVHVTSVARKASTIAQTFPNLSCLQLLDNDIRSLRQLERLRPMLTNLTALHLGKNPVTRNASEAALRAWVKGQGPCVSLVSPGHGPASDGRSICTGDRRQYTQQQQQHCPLTNASASQQQYSPPSTPTTQATPPLPAAPTPHPPCGT-GSNNAKPLGGSDVGVPS 883          
BLAST of mRNA_F-serratus_M_contig1492.3388.1 vs. uniprot
Match: A0A6H5JFV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV0_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 5.020e-55
Identity = 224/666 (33.63%), Postives = 286/666 (42.94%), Query Frame = 0
Query:  116 SLLELSLDGNPVAVQNGAGSRYRQFILQRLPSLHHLDLKRVRNDDQSFS--------SPSQPATATS------------------------------------WTTCKNSSSDTKTITNEATLPGLKNIHENRRIKDDHGS-NTSPRRVIERTTHVCAMKEGRRWSSEGTMGNDDARQYQCGTGAWMVTPRAPGGTSGTSSYFSPCRDGKRNSGLPEERCKQTGGVPAGHEKIRQDEIYAGCTQVPFATIRCAGMESVGITGNLAIKESEAVSAKVSQAGREDRETIALKERGGAIDAARK--CWERRKKCSGASGTR-RQTRHSSSAGTCTCPGGSNRCNHRTLPTTISNSTIPHNQSDLHPAFSSTC----------------SFVPPDRRGFSTSKSEGVSGGSSANTTGTDLSTRNGRRSKDQDRSVSVAPGGMGYFELEQRVPEDRVRLEAACALEPGV-------TLTVYGNVWRWLSDEKVCLLKEKVFEVQFLYVHVDSVARKAAAIAQTFLNLTSLRLLDNDIRSFKQLEQLRPLVANLLLLDLGHNPVATSASEVARQAWVQAQGPRLRLATASH-------------ERIHVGPEEQLERWNC---SSHEHLRSEGSNQALPPPLVERDTLLPHEATSGSKNAEISSGSRYSVPA 694
            SL+ELSL GNPVAVQNG GS YR +ILQ LP LHHLDLKRV +  QS S        +PS   TA++                                    W T  N  S + T +NE +  G         +   HGS +T  R      +               + G DD R      G  M  P    G  G+        DG    G  E+       + AG   I   +   G  +            +VG   + A +  EAV+ K ++  RE+ E  ALKER  AI+AAR+  CWERR   S  S  R R  R S++AG       S + +    P   S                                   S  PP RR  S + +     G +    G       GRRS+D  R  S++ GG+GYFELEQR+    + +    A   GV       TL VYG+VWRWL D KVC L+E+V E +F  VHV SVARKA+ IAQTF NL+ L+LLDNDIRS +QLE LRP++ NL  L LG NPV  SASE A +AWV+ QGP + L +  H              R+H   ++Q    N      H    S  + QA PP L    T  P   T G+ N +   G    VP+
Sbjct:  291 SLMELSLFGNPVAVQNGLGSSYRSYILQHLPKLHHLDLKRVTDHGQSISHQYSDGNMAPSTTRTASADDARESRGGGNNGRSRTAFHETMGNSGKGSRKPSGAWRTGGNGFSTSGTNSNEGSNDGFP-------VLLTHGSADTQSRGEHHSGSXXXXXXXXXXXXXXXSQGGDDPRGLHR-AGPVMSAPAPDKGAIGS--------DGMVRGGAWEQVTVFVQTMGAGECGITAGDSSRGAARKQVVL-------AVGTGMSRAAEAREAVTLKRAKTDREEWEKTALKERREAIEAARRAECWERRGGGSITSRARHRNPRDSTTAGK---DSTSRKTSAHVKPPPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSPTPPSRRTSSLANTGSEVAGVTRTVGGV-----GGRRSRDTGRRGSIS-GGVGYFELEQRLRHKSMGVGDVAASGGGVPSGAGGITLKVYGDVWRWLGDGKVCSLREQVVEARFSLVHVTSVARKASTIAQTFPNLSCLQLLDNDIRSLRQLEHLRPMLTNLTALYLGKNPVTRSASEAALRAWVKGQGPCVSLVSPGHGPASDGRNVCTGDRRLHTQQQQQSPLTNAFAGQQHSSPPSTPTTQAAPP-LPAAPTPHPPCGT-GTNNVKPLGGGDMGVPS 922          
BLAST of mRNA_F-serratus_M_contig1492.3388.1 vs. uniprot
Match: A0A7S4A7D1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7D1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.810e-9
Identity = 105/149 (70.47%), Postives = 119/149 (79.87%), Query Frame = 0
Query:    8 MVGKNKIEKISNLESLRKLDVLDLHSNGIRDMEGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKITSFDDCQCIFSVGSLLELSLDGNPVAVQNGAGSRYRQFILQRLPSLHHLDLKRV 156
            M+GKN+I+ ISNL  L KLDVLDLHSN I      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX I S D   C F +  L+ELSLDGNP+A+++     YR+F + RL +L HLDLK++
Sbjct:    1 MLGKNRIKHISNLSKLIKLDVLDLHSNTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHSLDAIDCFFHLRHLMELSLDGNPIALKDPTA--YRRFAVDRLKTLRHLDLKKI 147          
BLAST of mRNA_F-serratus_M_contig1492.3388.1 vs. uniprot
Match: A0A7S3XMA4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMA4_HETAK)

HSP 1 Score: 66.6 bits (161), Expect = 2.010e-9
Identity = 29/61 (47.54%), Postives = 44/61 (72.13%), Query Frame = 0
Query:  101 KITSFDDCQCIFSVGSLLELSLDGNPVAVQNGAGSRYRQFILQRLPSLHHLDLKRVRNDDQ 161
            ++ SFD  QC+F   SLLELSLD NP+A    A  +YRQF++  +P+L HLDLK++ ++++
Sbjct:   59 QVRSFDHVQCLFKSQSLLELSLDNNPIA----ADDKYRQFVVDNIPTLQHLDLKKITDEER 115          
BLAST of mRNA_F-serratus_M_contig1492.3388.1 vs. uniprot
Match: F0YI54_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI54_AURAN)

HSP 1 Score: 61.2 bits (147), Expect = 8.630e-6
Identity = 28/61 (45.90%), Postives = 44/61 (72.13%), Query Frame = 0
Query:  101 KITSFDDCQCIFSVGSLLELSLDGNPVAVQNGAGSRYRQFILQRLPSLHHLDLKRVRNDDQ 161
            ++ SFD   C+F V  L+ELS+DGNP+A+Q+     YR+F ++R+ +L HLDLKRV + ++
Sbjct:  485 RVQSFDAVACLFDVRFLMELSMDGNPIALQDPHA--YRRFAVERVKTLRHLDLKRVTDAER 543          
BLAST of mRNA_F-serratus_M_contig1492.3388.1 vs. uniprot
Match: A0A7S1G595_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G595_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 9.200e-5
Identity = 26/60 (43.33%), Postives = 41/60 (68.33%), Query Frame = 0
Query:  102 ITSFDDCQCIFSVGSLLELSLDGNPVAVQNGAGSRYRQFILQRLPSLHHLDLKRVRNDDQ 161
            +  F   +C+F VG L+EL+LDGNP+   + A   YRQ I++RL S+ H+DL+RV  +++
Sbjct:  225 LPDFGSVECVFGVGRLVELALDGNPLVGDDPAA--YRQAIVRRLRSVKHIDLRRVSEEER 282          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1492.3388.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G4V8_ECTSI9.090e-5735.09Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JFV0_9PHAE5.020e-5533.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4A7D1_9STRA1.810e-970.47Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3XMA4_HETAK2.010e-947.54Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
F0YI54_AURAN8.630e-645.90Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1G595_9STRA9.200e-543.33Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 67..88
e-value: 78.0
score: 8.3
coord: 1..22
e-value: 19.0
score: 13.3
coord: 563..584
e-value: 180.0
score: 5.3
coord: 45..66
e-value: 5.2
score: 16.0
coord: 23..44
e-value: 16.0
score: 14.0
coord: 89..110
e-value: 14.0
score: 14.5
NoneNo IPR availablePFAMPF14580LRR_9coord: 51..161
e-value: 7.0E-13
score: 48.4
NoneNo IPR availablePANTHERPTHR45973:SF8LEUCINE RICH REPEAT CONTAINING 49coord: 4..586
NoneNo IPR availablePANTHERPTHR45973FAMILY NOT NAMEDcoord: 4..586
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 10..159
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 545..607
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 45..68
e-value: 9.8
score: 13.3
coord: 89..114
e-value: 6.8
score: 14.6
coord: 23..44
e-value: 46.0
score: 7.9
coord: 589..612
e-value: 290.0
score: 1.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 4..164
e-value: 7.6E-34
score: 118.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 548..627
e-value: 1.2E-5
score: 26.6
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 25..46
score: 8.336
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 3..24
score: 6.849
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 91..112
score: 7.119
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 565..586
score: 7.442
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 591..612
score: 4.562
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 69..90
score: 7.335
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 47..68
score: 7.935

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1492contigF-serratus_M_contig1492:109266..114281 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1492.3388.1mRNA_F-serratus_M_contig1492.3388.1Fucus serratus malemRNAF-serratus_M_contig1492 108582..114416 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1492.3388.1 ID=prot_F-serratus_M_contig1492.3388.1|Name=mRNA_F-serratus_M_contig1492.3388.1|organism=Fucus serratus male|type=polypeptide|length=897bp
MSGLRVVMVGKNKIEKISNLESLRKLDVLDLHSNGIRDMEGFDSLQELRV
LNLAGNKLRMVENVSCLTALTELNLRRNTIRKVMELDMLPRLQRLFLSNN
KITSFDDCQCIFSVGSLLELSLDGNPVAVQNGAGSRYRQFILQRLPSLHH
LDLKRVRNDDQSFSSPSQPATATSWTTCKNSSSDTKTITNEATLPGLKNI
HENRRIKDDHGSNTSPRRVIERTTHVCAMKEGRRWSSEGTMGNDDARQYQ
CGTGAWMVTPRAPGGTSGTSSYFSPCRDGKRNSGLPEERCKQTGGVPAGH
EKIRQDEIYAGCTQVPFATIRCAGMESVGITGNLAIKESEAVSAKVSQAG
REDRETIALKERGGAIDAARKCWERRKKCSGASGTRRQTRHSSSAGTCTC
PGGSNRCNHRTLPTTISNSTIPHNQSDLHPAFSSTCSFVPPDRRGFSTSK
SEGVSGGSSANTTGTDLSTRNGRRSKDQDRSVSVAPGGMGYFELEQRVPE
DRVRLEAACALEPGVTLTVYGNVWRWLSDEKVCLLKEKVFEVQFLYVHVD
SVARKAAAIAQTFLNLTSLRLLDNDIRSFKQLEQLRPLVANLLLLDLGHN
PVATSASEVARQAWVQAQGPRLRLATASHERIHVGPEEQLERWNCSSHEH
LRSEGSNQALPPPLVERDTLLPHEATSGSKNAEISSGSRYSVPASDGAGS
SCFFVGEQDNERSESLPVFLPSFEEGVEKIAEANLASASVAFTRLADARE
RAKDSSWGSVALTASWGLPGQQRTPPTPGASAEAGSTWAASARAAKLACN
ITMRNVCEAHRRDVELDRAWNAVIGTMVQDVLVAAGEQLARVSPSQEHFP
GKGDQFESTPTSFRHLRSPGDGWADNIGTRNAIRTHPPLAKWLNEI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt