prot_F-serratus_M_contig1491.3382.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1491.3382.1
Unique Nameprot_F-serratus_M_contig1491.3382.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length312
Homology
BLAST of mRNA_F-serratus_M_contig1491.3382.1 vs. uniprot
Match: A0A6H5K373_9PHAE (TLC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K373_9PHAE)

HSP 1 Score: 491 bits (1265), Expect = 2.320e-171
Identity = 246/302 (81.46%), Postives = 274/302 (90.73%), Query Frame = 0
Query:    7 SFNCVLSWKWGWIPSAIAIPLFWLRLDTVGLEAFEKGWKQGLATFIASEVVRVAAVELLPYWWRDVARRTDPLTDKSREQFGGQLMSLLLSSYVTWSIIRWDWQVTSKLPFIQTVGEDHTGVVFTLMAMMLAYIVHDTWHLLRSWRVNRNPVMLIHHGVFALISIMGMRFMQLPVHMRIHFIMFSAEMSTPLLNGRWLLRHVGLVHKSHSVMIVISISFLALFLATRILMYLFMILDIIQLHAELIMPLPLKPLFLLAVVISYVVNLYWASLIVGALFGKEGAGKRRGGPTLTVNHPDTQKK 308
            S N VLSWK GWIPSAIA+ L +L L++VGLE FE GW++G+A F+A EVVRV AV LLPYWWRDVARRT PLTD+SREQFGGQL SLL+SSY+TWSIIRWDWQ+T+KLPFIQTVGEDHTGVVF+LMA+ML+YIVHDTWHL+RSWRVNRN VMLIHH VFA+ISIMGMRF QLP+HMRIHFIMFSAEMSTPLLNGRWL+RH+GLVHKSH +MI  S SFLALFL TRILMYLFMILDIIQL+AELIMP+PL+ +FL AVV+SYVVNLYWA LI+GALFG EG  KRRGGPTLTVNHPDTQKK
Sbjct:  148 SNNDVLSWKRGWIPSAIAVSLLFLPLESVGLEVFEPGWERGIAAFVALEVVRVGAVALLPYWWRDVARRTGPLTDRSREQFGGQLTSLLVSSYLTWSIIRWDWQLTNKLPFIQTVGEDHTGVVFSLMAIMLSYIVHDTWHLVRSWRVNRNRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLMRHIGLVHKSHVIMIATSFSFLALFLVTRILMYLFMILDIIQLYAELIMPMPLRSVFLGAVVVSYVVNLYWAWLIIGALFGNEG--KRRGGPTLTVNHPDTQKK 447          
BLAST of mRNA_F-serratus_M_contig1491.3382.1 vs. uniprot
Match: D7FKT8_ECTSI (TLC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT8_ECTSI)

HSP 1 Score: 487 bits (1254), Expect = 5.450e-170
Identity = 242/302 (80.13%), Postives = 274/302 (90.73%), Query Frame = 0
Query:    7 SFNCVLSWKWGWIPSAIAIPLFWLRLDTVGLEAFEKGWKQGLATFIASEVVRVAAVELLPYWWRDVARRTDPLTDKSREQFGGQLMSLLLSSYVTWSIIRWDWQVTSKLPFIQTVGEDHTGVVFTLMAMMLAYIVHDTWHLLRSWRVNRNPVMLIHHGVFALISIMGMRFMQLPVHMRIHFIMFSAEMSTPLLNGRWLLRHVGLVHKSHSVMIVISISFLALFLATRILMYLFMILDIIQLHAELIMPLPLKPLFLLAVVISYVVNLYWASLIVGALFGKEGAGKRRGGPTLTVNHPDTQKK 308
            S N VLSWK GWIPSAIA+ L +L L++VGLEAFE GW++G+A F+A EVVRV AV LLPYWWR++ARRT PLTD+SREQFGGQL SLL+SSY+TWSIIRWDWQ+T+KLPFIQTVGEDHTGVVF+LMA+ML+YIVHDTWHL+RSWRVNRN VMLIHH VFA+ISIMGMRF QLP+HMRIHFIMFSAEMSTPLLNGRWL+RH+GLVHKSH +MI  S SFL LFL TRI++YLFMILDIIQL+AELIMP+PL+ +FL AVV+SYVVNLYWA LI+GALFG EG  KRRGGPTLTVNHPDTQKK
Sbjct:  128 SNNDVLSWKRGWIPSAIAVSLLFLPLESVGLEAFEPGWERGIAAFVALEVVRVGAVGLLPYWWREIARRTGPLTDRSREQFGGQLTSLLVSSYLTWSIIRWDWQLTNKLPFIQTVGEDHTGVVFSLMAIMLSYIVHDTWHLVRSWRVNRNRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLMRHIGLVHKSHVIMIATSFSFLVLFLVTRIMLYLFMILDIIQLYAELIMPMPLRSVFLGAVVVSYVVNLYWAWLIIGALFGNEG--KRRGGPTLTVNHPDTQKK 427          
BLAST of mRNA_F-serratus_M_contig1491.3382.1 vs. uniprot
Match: A0A835ZB74_9STRA (TLC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB74_9STRA)

HSP 1 Score: 149 bits (376), Expect = 6.650e-39
Identity = 100/305 (32.79%), Postives = 160/305 (52.46%), Query Frame = 0
Query:   16 WGWIPSAIAIPLFWLR--LDTVGLEAFEKGWKQGLATFIASEVVRVAAVELLPYWWRDVARRTDPLTDKS-REQFGGQLMSLLLSSYVTWSIIRWDWQVTSKLPFIQTVGE-DHTGVVFTLMAMMLAYIVHDTWHLLRSWRVNRNPVMLIHHGVFALISIMGMRFMQLPVHMRIHFIMFSAEMSTPLLNGRWLLRHVGLVHKSHSVMIVISISFLALFLATRILMYLFMILDIIQ-----------------LHA--------------ELIMPLPLKPLFLLAVVISYVVNLYWASLIVGALFG 285
            WGWIP A+ +   +     DT     +   W    +T+ A E +R+ AV LLP WWR   RR     +++ RE FG Q MSL +S+Y    + +     + +LPF+ T  + D   ++  +  ++  Y++ DT HL+R+W ++ NP ML+HH +F+++  +G    QLP H RIH ++FSAE+STPLLN RW+LR V   H    ++  +S++F  LFL +R+ +Y  +I D+++                 LH               +L  P   + +F  AV  SY++NLYW  +I+  + G
Sbjct:   14 WGWIPGALVLAGLYCTGVFDTEDKSLWHTAW----STYAACEALRMVAVWLLPLWWR---RRRGGAPERAIRESFGTQAMSLAVSTYTVAHLAQLRLYASWELPFLHTAADADCIALIHHMTVVLGTYVICDTSHLIRTWHLSSNPAMLLHHAIFSVVLGLGAANPQLPPHYRIHVVLFSAELSTPLLNLRWILRWVA--HYKGRLVAPLSMAFALLFLFSRVGLYGALIADLVKKQPHRQLDVRLLRAACCLHTSFCGSSAWPVKTRRKLSFPRAQQDIFCAAVFCSYLLNLYWLIIIIKTVGG 309          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1491.3382.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K373_9PHAE2.320e-17181.46TLC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FKT8_ECTSI5.450e-17080.13TLC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZB74_9STRA6.650e-3932.79TLC domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainSMARTSM00724lag1_27coord: 82..288
e-value: 7.7E-6
score: 35.4
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 95..280
e-value: 1.0E-17
score: 64.5
IPR006634TRAM/LAG1/CLN8 homology domainPROSITEPS50922TLCcoord: 82..288
score: 14.621
NoneNo IPR availablePANTHERPTHR13439CT120 PROTEINcoord: 91..285
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 217..240
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 180..184
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 149..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 260..284
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..205
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 108..126
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 285..311
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 206..216
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..179
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 241..259
NoneNo IPR availableTMHMMTMhelixcoord: 158..177
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 86..105
NoneNo IPR availableTMHMMTMhelixcoord: 261..283
NoneNo IPR availableTMHMMTMhelixcoord: 219..241
NoneNo IPR availableTMHMMTMhelixcoord: 126..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1491contigF-serratus_M_contig1491:182944..183879 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1491.3382.1mRNA_F-serratus_M_contig1491.3382.1Fucus serratus malemRNAF-serratus_M_contig1491 179705..184389 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1491.3382.1 ID=prot_F-serratus_M_contig1491.3382.1|Name=mRNA_F-serratus_M_contig1491.3382.1|organism=Fucus serratus male|type=polypeptide|length=312bp
MPQDTGSFNCVLSWKWGWIPSAIAIPLFWLRLDTVGLEAFEKGWKQGLAT
FIASEVVRVAAVELLPYWWRDVARRTDPLTDKSREQFGGQLMSLLLSSYV
TWSIIRWDWQVTSKLPFIQTVGEDHTGVVFTLMAMMLAYIVHDTWHLLRS
WRVNRNPVMLIHHGVFALISIMGMRFMQLPVHMRIHFIMFSAEMSTPLLN
GRWLLRHVGLVHKSHSVMIVISISFLALFLATRILMYLFMILDIIQLHAE
LIMPLPLKPLFLLAVVISYVVNLYWASLIVGALFGKEGAGKRRGGPTLTV
NHPDTQKKKDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006634TLC-dom