mRNA_F-serratus_M_contig1491.3380.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1491.3380.1 vs. uniprot
Match: D7FKT7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKT7_ECTSI) HSP 1 Score: 1069 bits (2764), Expect = 0.000e+0 Identity = 576/1063 (54.19%), Postives = 723/1063 (68.02%), Query Frame = 1
Query: 1 VQVDECLTAWEKDNTPAAAKVSDVFQRCIVCTLPYGTCKHNTQWLDNRHLHSILDTLPIDRIEETMDDISDVLTPAPVARVTVEPDDDAPSFSHIHWETLSPQLARELLDRKVDVLTPCSRAGHTMVLLDGPGSFTEDTRLLVVFGGVSSTDQT----GNHDWTNPPSKDE------------GGLPLRTMSYIKDVWLFRVSHRTWYCPHITGEPPRGRYGHVSLALDSELMWMFGGRLEGGSQESDTFVLNVREMKWERTNVEGGAGTTPSPRVWSAAARVGERVILFGGADLQRGRIFDDVWIWNTKTRYWEEQIVIGNPPLARYGHALLACPDGKILVLGGCCVSTSAEDGLPTDHDKLKLRVRVAASRVTQAYQLEEAEATFKAIDNYCEPGGSMQDFGQLRKKSFPALYSRSNGHILARKTFKD-----------FSRHQAQLAAAIAARERETALREKELRTALHEQAAMTYWAKLHSRNPFKKMDATFLDTENLIWGETNPLSSGECRSTSPAARMHFSAVLLHKKVVVWGGCFPTSRRMETIDEGVHVFDLVHRRWRKLFGQEQKEGIKPRLDSALGQLRRAERALFDAKQTARTIGAPRGRTLQVVQAEAAISVNRWRVRNIEEEFRQAVLSAPPRAAHAGCTVGHRVIYYGGWGAQTEKGELLVLDIEDPREKGRRLDEEFHQRLERERQEREATEVGALRRAVVLERMTKEQELARAAAETVIMAIEDARSTHLDLTIAPTPRLCYANSTTIWIEWDQTTVDCLGNPIDEPIEYILYMRGGFSEWKVGEDVLVEHLSKAQQSGAES-SLSTKTSFMDIGSLNGVLSSLGKKGRNSSETTPAGDDRKSQGANGVDMLGSNSGRDEERAPQPLDTRRLFPAVISRIST-NGLFDIRWADGECEDDVRRHRIHRSPSSILPWAVIYRGVECRYAVEGMVPDYIIQREGDFCYEVGADFSLQTKGAEMPRHRLSRHSVVVSFRTKFAGQGPINDG---KNFVDKTTLSGVKARLISAKMLDESVEASRVDNISTTSRLHVLHGQYLGKGKGRRYL 3093
++VDECL+ WEKD PA D RC+VCTL +G+C+H +WLD+R IL+ LP D I+ +DDISDVLTP P+ T+ D PS ++ WETL Q A EL RKVD+ +P SR+GHTMV+L+G + EDTRLLVVFGGVS+T+ + D +P + GG+ + + Y DV +F + TW+CP +G+ P GRYGH +LALD E MWMFGGRL+GG Q DT L+VREM+W RTN EG +P+PR WS+A +V E+V+LFGGADL R+FDDVW W+ +T W EQIV+G PPLARYGH LLACP G++LVLGGCCVSTSAE+GLP DHD+L LRVRVAAS V +AYQLEEAE A D+Y E GG + + S P +S G KD +R QAQLAAAIAARE +T LRE+ELR L+EQAAMTYWAKL S++PFK++D TFLDTEN+IWG +NP + G ++T P+ARMHFSAV+L +KVV+WGGC PTS+R+ET++ V VFDL H RW G+E EGI+PRLD+A+GQLRRA+RALF+A Q A T+GAP GRT+QVVQAEA + VNRWRV+ I++E + A+ S R HAGC VG+RV+Y+GG GA+TEKG LLVLDIE P EK RRL+EEFH RLERERQ+REA E ALRRA E M K ELAR AAET M+ EDARS ++LTIAPTPRL ANSTT+W+EWD+ + D +G P D +EY LYM GGF EW+VG+ VLVE++S+AQ+ A S S T +S D GSL G S G ++ DD++ + G + +++GR +PL L PA I+ S GLFDIRW DGE E VRR RIHR+ S PW +IY G +C YAVEGMVP+ +++RE +F YE A FSLQTKG E+PR RLSRHS VV+ RT F GQGP+ G + V ++T S +KARL +AK LD+S+ AS+ S +S + LHGQYL GKG YL
Sbjct: 50 IKVDECLSVWEKDRAPAEGAALDPLHRCVVCTLRHGSCEHTKEWLDDRARPPILNPLPKDNIDFALDDISDVLTPVPLVSKTINADRGGPSLGNLRWETLCAQPADELSGRKVDLSSPSSRSGHTMVVLNGADNLREDTRLLVVFGGVSTTNSDHPLDAHLDEKDPTCSSDCDDAGDAMGISGGGIRQQPLHYHADVRVFNIGLSTWHCPDTSGDLPEGRYGHTALALDRETMWMFGGRLQGGLQAGDTQTLDVREMRWHRTNNEGDGDLSPAPRFWSSAVKVREQVVLFGGADLLNERVFDDVWTWDVQTERWTEQIVVGTPPLARYGHVLLACPQGQLLVLGGCCVSTSAEEGLPPDHDRLHLRVRVAASLVDRAYQLEEAEIAVGAFDSYKELGGLVAE-----SLSGPDSHSCEGGSTFRASRTKDSCRSEKERWRSLARRQAQLAAAIAARESDTNLREEELREVLYEQAAMTYWAKLRSQHPFKELDMTFLDTENMIWGVSNPPAVGGGKTTPPSARMHFSAVVLGQKVVLWGGCLPTSKRVETVEGSVRVFDLDHLRWSTPVGKEHPEGIRPRLDAAVGQLRRAQRALFEATQRAMTLGAPGGRTMQVVQAEAGVEVNRWRVKKIDDEVQNAIPSPESRGQHAGCAVGNRVMYFGGLGAETEKGALLVLDIEQPHEKERRLEEEFHMRLERERQQREAAEAEALRRAARQEEMRKGLELAREAAETEFMSAEDARSAIVELTIAPTPRLRCANSTTLWLEWDRPSTDAVGKPPDGRLEYTLYMSGGFREWEVGDRVLVEYMSRAQRKAAASNSTITTSSVSDAGSLAGGSLSEG--------SSFFSDDQQRLSSVGGGRVEASTGR------EPLPN--LLPAEITATSVVGGLFDIRWNDGERERGVRRSRIHRAASPSPPWTMIYEGTDCHYAVEGMVPESVVERERNFPYEASAKFSLQTKGTEVPRDRLSRHSPVVTLRTIFDGQGPLGKGGWSQKRVGRSTTS-MKARLATAKALDDSITASQ----SCSSGVRSLHGQYLATGKGGSYL 1086
BLAST of mRNA_F-serratus_M_contig1491.3380.1 vs. uniprot
Match: D8LRT0_ECTSI (Kelch motif family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT0_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 1.910e-18 Identity = 53/159 (33.33%), Postives = 81/159 (50.94%), Query Frame = 1
Query: 568 TWYCPHITGEPPRGRYGHVSLALDSELMWMFGGRLEGGSQESDTFVLNVREMKWERTNVEGGAGTTPSPRVWSAAARVGERVILFGGADLQRGRIFDDVWIWNTKTRYWEEQIVIGNPPLARYGHALLACPDGKILVLGGCCVSTSAEDGLPTDHDKLK 1044
TW G+ P RYGH S L M++ GG+ G D L++ + W N T PSPR W A+ VG ++++ GG + ++D+W+++T + W + G PP ARYGHA++ PDG+IL+ GG + E +P H L+
Sbjct: 2 TWQEVRCGGDLPDARYGH-SCHLVGSRMFIVGGKGRSGQLYRDVHFLDLVDWTWVAVNA---TSTGPSPRFWQASVLVGHKIVVHGGWN-GSNHCYEDLWVFDTDSFAWMQPRTGGLPPTARYGHAMVLLPDGRILLSGGATID---EKCVPVYHKDLR 152
BLAST of mRNA_F-serratus_M_contig1491.3380.1 vs. uniprot
Match: A0A7S3TWJ8_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TWJ8_9SPIT) HSP 1 Score: 79.7 bits (195), Expect = 1.150e-12 Identity = 70/251 (27.89%), Postives = 111/251 (44.22%), Query Frame = 1
Query: 268 PSFSHIHWETLSPQLARELLDRKVDVLT---PCSRAGHTMVLLDGPGSFTEDTRLLVVFGGVSSTDQTGNHDWTNPPSKDEGGLPLRTMSYIKDVWLFRVSHRTWYCPHITGEPPRGRYGHVSLALDSELMWMFGGRLEGGSQES-----DTFVLNVREMKWERTNVEGGAGTTPSPRVWSAAARVGERVILFGGADLQRGRI---FDDVWIWNTKTRYWEEQIVIGNPPLARYGHALLACPDGKILVLGG 987
P + ET+S + L+D+ D + P R GHT ++ + + VFGG WT+ DE RT+ Y+ D+ + V++ W P G PP R GH + + S + + G ++ G E+ D VL+ + + W + +G PS R +A +GE++++FGGA L + D+ I +T T W + + G PP R H+ A DG I V GG
Sbjct: 28 PPLQVLDTETMS--VCHPLIDQGNDGRSSHIPDDREGHTASVIG---------QSIYVFGGT----------WTD----DED----RTI-YMNDLHVLDVNNYAWSRPARLGTPPIEREGHSASVVGSMIYFFAGTWVDFGEDETSVYLNDLHVLDTQTVTWTQPTT---SGVIPSQREGHSATVMGEKIVIFGGAGLDKEDTSVNLCDLHILDTATLAWSQPLTQGKPPQERRYHSATAV-DGVIYVFGG 244
BLAST of mRNA_F-serratus_M_contig1491.3380.1 vs. uniprot
Match: L1JN24_GUITC (ACB domain-containing protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JN24_GUITC) HSP 1 Score: 68.2 bits (165), Expect = 7.380e-8 Identity = 57/214 (26.64%), Postives = 97/214 (45.33%), Query Frame = 1
Query: 349 TPCSRAGHTMVLLDGPGSFTEDTRLLVVFGGVSSTDQTGNHDWTNPPSKDEGGLPLRTMSYIKDVWLFRVSHRTWYCPHITGEPPRGRYGHVSLALDSELMWMFGGRLEGGSQESDTFVLNVREMKWERTNVEGGAGTTPSPRVWSAAARVGERVILFGGADLQRGRIFDDVWIWNTKTRYWEEQIVI-GNPPLARYGHALLACPDGKILVLGG 987
+P RAGH+ LLD ++V GG G + + + G + TM + + TW I+G P R H + + ++FGG + D + L++ + WER +EG PS R+ ++ R+G +++FGGA+ Q DV++++ + W + I G PP R GHA + G+++V+GG
Sbjct: 204 SPSPRAGHSATLLD--------EEHVLVLGGHGGN---GKFNEIHILQVEHG---INTMLKKSERPIL-----TWTRQEISGPYPINRGSHCAAEHQGSV-YLFGGESDERECLDDFWRLDLAQQTWERCPIEG----CPSKRMDASMVRIGNHLVVFGGANAQTQ--LADVFVFDVPDKRWRKVSPIEGPPPEPRAGHACVL-HGGRMIVMGG 390
BLAST of mRNA_F-serratus_M_contig1491.3380.1 vs. uniprot
Match: A0A536EIA2_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536EIA2_9CHLR) HSP 1 Score: 62.0 bits (149), Expect = 5.270e-7 Identity = 40/157 (25.48%), Postives = 69/157 (43.95%), Query Frame = 1
Query: 526 SYIKDVWLFRVSHRTWYCPHITGEPPRGRYGHVSLALDSELMWMFGGR-LEGGSQESDTFVLNVREMKWERTNVEGGAGTTPSPRVWSAAA--RVGERVILFGGADLQRGRIFDDVWIWNTKTRYWEEQIVIGNPPLARYGHALLACPDGKILVLGG 987
++ D W++ W H PP Y + ++ + ++GG + G +DT+ + +W + + +P R +S A V +R++LFGGAD FDD+W ++ W + G P AR HA+ + +LVL G
Sbjct: 20 TFFDDTWVYDPGASQWTKRHPAPSPPARSYYATAYDARADRLILYGGENVNHGDYFADTWAYSFGTNRWTQMRPK----ESPPARDYSVMAYDSVRDRILLFGGADSTETP-FDDLWAYDLDRDTWSQLKPTGPKPTARAWHAMAFDKEAGVLVLFG 171
BLAST of mRNA_F-serratus_M_contig1491.3380.1 vs. uniprot
Match: A0A2T9YVE9_9FUNG (Uncharacterized protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YVE9_9FUNG) HSP 1 Score: 65.9 bits (159), Expect = 5.880e-7 Identity = 45/162 (27.78%), Postives = 77/162 (47.53%), Query Frame = 1
Query: 541 VWLFRVSHRTWYCPHITGEPPRGRYGHVSLALDSELMWMFGGRLEGGSQESDTFVLNVREMK-----WERTNVEGGAGTTPSPRVWSAAARVGERVILFGGADLQRGRI-FDDVWIWNTKTRYWEEQIVIGNPPLARYGHALLACPDGKILVLGGCCVSTSA 1008
++ F + + WY ITG GR GH ++++ S + ++FGG ++G D NVR W+ +G P R +++ ++GG G + F+D+W ++ WE+ ++ G P ARYGHA A D I ++GG + +A
Sbjct: 260 LYAFNIGNEMWYKVPITGNSLLGRKGHTAISVGSSV-YIFGGTVDGYYLH-DLACFNVRLAATDGPGWKFIETDG---KFPLGRAGHTCNYYNDKIYIYGG---MCGNVCFNDLWSYSITENKWEQILLRGATPPARYGHAS-ALVDDCIFIMGGRTIDGTA 412
BLAST of mRNA_F-serratus_M_contig1491.3380.1 vs. uniprot
Match: A0A482S382_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S382_9ARCH) HSP 1 Score: 60.1 bits (144), Expect = 1.620e-6 Identity = 38/144 (26.39%), Postives = 69/144 (47.92%), Query Frame = 1
Query: 19 LTAWEKDNTPAAAKVSDVFQRCIVCTLPYGTCKHNTQWLDNRHLHSILDTLPIDRIEETMDDISDVLTPAPVARVTVEPDDDAPSFSHIHWETLSPQLARELLDRKVDVLTPCSRAGHTMVLLDGPGSFTEDTRLLVVFGGVSS 450
A E D++ +++ ++ RC++CTLPYG+C+H+ WL ++ + D ++ +D + D++ P+ + D H+ W L + + +L V + P RA H+ V +D R +VVFGG S
Sbjct: 44 FNADEDDSSQLSSRQHEL--RCMICTLPYGSCEHSPDWLTQHEQSQLVSHMQSD-LQREIDSVLDLVKFEPLD-LGENIDTSEIDLEHMQWLPLPEERSDKLGAEAVKLFVPDKRAWHSTVNIDD--------RYVVVFGGFQS 175
BLAST of mRNA_F-serratus_M_contig1491.3380.1 vs. uniprot
Match: A0A7S4C1W9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1W9_CHRCT) HSP 1 Score: 59.7 bits (143), Expect = 1.650e-5 Identity = 42/154 (27.27%), Postives = 75/154 (48.70%), Query Frame = 1
Query: 571 WYCPHITGEPPRGRYGHVSLALDSELMWMFGG--RLEGGSQE--SDTFVLNVREMKWERTNVEGGAGTTPSPRVWSAAARVGERVILFGGADLQR----GRIFDDVWIWNTKTRYWEE-QIVIGNPPLARYGHALLACP-DGKILVLGGCCVST 1002
W P + +P R GH + A +++FGG E GS+ +D + + + +W + P R+ SAAA +G+ ++LFGG D + G I DD+W ++ +R W + + P +R+ +AC +G+++V C S+
Sbjct: 30 WRTPKTSLKPTPARSGHTAAADAEGNVFLFGGYAEYEDGSRSVVNDLWCFSNSKKEWVLVQAKSSDPAFPGQRLCSAAAIIGQEMLLFGGWDPEDAGTGGSILDDIWSFDLSSRKWSRLECKMPGGPTSRH----VACTVNGQVVVHTFRCKSS 179
BLAST of mRNA_F-serratus_M_contig1491.3380.1 vs. uniprot
Match: J3PEH6_GAET3 (Kelch-domain-containing protein n=2 Tax=Magnaporthaceae TaxID=81093 RepID=J3PEH6_GAET3) HSP 1 Score: 60.8 bits (146), Expect = 1.940e-5 Identity = 36/127 (28.35%), Postives = 54/127 (42.52%), Query Frame = 1
Query: 523 MSYIKDVWLFRVSHRTWYCPHITGEPPRGRYGHVSLALDSELMWMFGGRLEGGSQESDTFVLNVREMKWERTNVEGGAGTTPSPRVWSAAARVGERVILFGGADLQRGRIFDDVWIW----NTKTRY 891
+ DVW + TW G P R GH + +D ++M++FGGR E GS D + +W G +PSPR + VG+ V++ GG +D+ + TK RY
Sbjct: 329 FQWFNDVWCYDSPTNTWTMLDCIGYIPIPREGHAAALVD-DVMYIFGGRTEEGSDLGDLAAFRITSRRWYTFQ---NMGPSPSPRSGHSMTTVGKAVVVVGGEPSSAATAVNDLGLVYMLDTTKIRY 451
BLAST of mRNA_F-serratus_M_contig1491.3380.1 vs. uniprot
Match: A0A0K6FWG6_9AGAM (Focal adhesion kinase 1 n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A0K6FWG6_9AGAM) HSP 1 Score: 60.5 bits (145), Expect = 2.090e-5 Identity = 59/235 (25.11%), Postives = 95/235 (40.43%), Query Frame = 1
Query: 334 KVDVL-TPCSRAGHTMVLLDGPGSFTEDTRLLVVFGGVSSTDQTGNHDWT-NPPSKDEGGLPLRTMSYIKDVWLFRVSHRTWYCPHITGEPPRGRYGHVSLALDSELMWMFGGRLEGGSQESDTFVLNVREMKWERTNVEGGAGTTPSPRVWSAAARVGERVILFGGADLQRGRIFDDVWIWNTKTRYWEEQIVIGNPPLARYGHALLACPDGKILVLGGCCVSTSAEDGLPTDH 1032
K+D+ P +RA H L VVFGG +TD + W+ N S +G + +D+ P R+GH + ++ +MFGG+ +DT+ ++ W AG P PR AAA VG+ + + GG + G DVW ++ + W + + P R GH +LA ++ V+GG +T + P+ H
Sbjct: 157 KLDIQPAPSARAAHAGCLCG---------TKFVVFGGTGNTDGPWDDLWSLNLYSLAQGNPSWEQIEVAQDI-----------------SSPLERFGHTMVGYENGF-YMFGGKHCEDRLFNDTWRFDITTRVWSELEC---AGDIPLPRHGHAAAIVGDVMYMCGGKG-EGGHDLGDVWSFHITEQRWYKFPSMSFEPSKRNGH-ILATLKERVFVVGGWKNNTFFSEVEPSIH 359 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1491.3380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1491.3380.1 >prot_F-serratus_M_contig1491.3380.1 ID=prot_F-serratus_M_contig1491.3380.1|Name=mRNA_F-serratus_M_contig1491.3380.1|organism=Fucus serratus male|type=polypeptide|length=967bp MDDISDVLTPAPVARVTVEPDDDAPSFSHIHWETLSPQLARELLDRKVDVback to top mRNA from alignment at F-serratus_M_contig1491:142830..146972- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1491.3380.1 ID=mRNA_F-serratus_M_contig1491.3380.1|Name=mRNA_F-serratus_M_contig1491.3380.1|organism=Fucus serratus male|type=mRNA|length=4143bp|location=Sequence derived from alignment at F-serratus_M_contig1491:142830..146972- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1491:142830..146972- >mRNA_F-serratus_M_contig1491.3380.1 ID=mRNA_F-serratus_M_contig1491.3380.1|Name=mRNA_F-serratus_M_contig1491.3380.1|organism=Fucus serratus male|type=CDS|length=5802bp|location=Sequence derived from alignment at F-serratus_M_contig1491:142830..146972- (Fucus serratus male)back to top |