mRNA_F-serratus_M_contig1485.3333.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1485.3333.1
Unique NamemRNA_F-serratus_M_contig1485.3333.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1485.3333.1 vs. uniprot
Match: D7FZZ0_ECTSI (2'-phosphotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ0_ECTSI)

HSP 1 Score: 468 bits (1203), Expect = 1.170e-158
Identity = 258/470 (54.89%), Postives = 312/470 (66.38%), Query Frame = 1
Query:    1 QLSKKLMWALRHGAEELRLNMRPDAFVHLDELLDNPRFRGVSIQQVQHVVAVDEKYRFSIMRDRAEGG------------------GLLIRADQGHSIGGVILEEQLLTRVDRAEDIPICVHGTSLAIWPSIRANGLRRMNRMHIHFAAGLPRAKGMVSGIRRKCRVFIYVDVALAMANGIVFFRSRNNKSAPPKTLQWRRGQDPRAIEAGVDPRAKTVRSTQENDNKCTFMQLRGGKLCRTCSMSRGKHNRPSTTGARGRVHVGIFPSALSLFSRWPIS---FGPMEIIEFPTILMDARSLQVLDEFRAYVRPVRNPILTPFCTSLTGIQQ-LIDRAILFEEALQRHTEFMRRNSCLPGQERSCLFLTCGNWDLRKMLPSQCELIGVDVPEHFKTWANIKDVFWEVAL------SRSPNWWGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIVQALCRRLGR 1326
            QLSK+L +ALRHGAE+L L +RPD FV LDELL  P FRGVS +QV+ VVA DEK R +I      GG                   + IRA+QGHS+ GVI EE+LLTRV+ A D+P+CVHGT    W +IR  GLR MNR HIHFAAGLP   G++SG+R+ C+V IYVDVA AM++G+ FFRS NN   P +T  W +G  P A+ A + PRAKT+R T       + MQLRG  + R C   RGK +RP     R R   G +    +     P +   FGPME+IEFPT+L+DA SL+VLDEFR YVRPVR+PILTPFCTSLTGI+Q  +D  +LFEEAL +HTEF+RRNSCLPGQERSCLF+TCGNWDL+ M+P+QC+LI   VP HF +WANIK+VF +V         R P   GGK      MPAMLSAL L +E R  SG DDC+N ARI   LCRR  R
Sbjct:   57 QLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSREQVEQVVASDEKGRMTIATFPVSGGEAAGSASACADPGAATNQAVFIRANQGHSVKGVIDEEKLLTRVEDAADVPVCVHGTDRKSWSNIREEGLRCMNRTHIHFAAGLPGESGVISGMRKACKVLIYVDVAAAMSDGVAFFRSTNN---PARTAPWSQGTSP-ALTALLLPRAKTLRRTSR---LTSMMQLRG--MPRRCHRGRGKEDRPRPDNVRAREKKGKWNGKANNTHPLPCAVGKFGPMEVIEFPTVLLDAHSLKVLDEFRVYVRPVRHPILTPFCTSLTGIEQSTVDGGVLFEEALSQHTEFLRRNSCLPGQERSCLFVTCGNWDLKTMMPAQCKLIDAPVPPHFNSWANIKEVFRDVMYRAARQSQRRPR--GGK---VGGMPAMLSALGLVLEGRHHSGLDDCRNIARIAIELCRRSRR 512          
BLAST of mRNA_F-serratus_M_contig1485.3333.1 vs. uniprot
Match: A0A6H5L3C1_9PHAE (2'-phosphotransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C1_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 2.270e-134
Identity = 249/529 (47.07%), Postives = 304/529 (57.47%), Query Frame = 1
Query:    1 QLSKKLMWALRHGAEELRLNMRPDAFVHLDELLDNPRFRGVSIQQVQHVVAVDEKYRFSIMRDRAEGG------------------GLLIRADQGHSIGGVILEEQLLTRVDRAEDIPICVHGTSLAIWPSIRANGLRRMNRMHIHFAAGLPRAKGMVSGIRRKCRVFIYVDVALAMANGIVFFRSRNN---KSAPPKTLQWRRGQDPRAIEAGVDPRA-KTVRSTQE------------------------------------NDNKCTFMQLRGGKLCRTCSMSR---------GKHNR-PSTTGARGRVHVGIFPSALSLFSRWPIS------------FGPMEIIEFPTILMDARSLQVLDEFRAYVRPVRNPILTPFCTSLTGIQQ-LIDRAILFEEALQRHTEFMRRNSCLPGQERSCLFLTCGNWDLRKMLPSQCELIGVDVPEHFKTWANIKDVFWEVAL------SRSPNWWGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIVQALCRRLGR 1326
            QLSK+L +ALRHGAE+L L +RPD FV LDELL  P FRGVS ++V+ + A DEK R +I      GG                   + IRA+QGHS+ GVI EE+LLTRV+ A D+P+CVHGT+   W SIR  GLR MNR HIHFAAGLP A G++SG+R+ C+V IYVDVA AM +G+VFFRS NN    S    TL+ R         A VD  A KTV   +                                     ND+    M   GG    T              G+ N  P+ +G R     G     + +++                 FGPME+IEFPT+L+DA SL+VLDEFR YVRPVR+P+LTPFCTSLTGI+Q  +D  +LFEEAL +HTEF+RRNSCLPGQERSCLF+TCGNWDL+ M+P+QC+LI   VP HF +WANIK+VF +          R P   GGK      MPAMLSAL L +E R  SG DDC+N ARI   LCRR  R
Sbjct:   33 QLSKRLTYALRHGAEKLGLRLRPDGFVSLDELLSKPSFRGVSRERVEQIAA-DEKGRMTIATYPVSGGEAAGSATACADPGAATNQAVFIRANQGHSMKGVIDEEKLLTRVEDAADVPVCVHGTNRKSWSSIREEGLRCMNRTHIHFAAGLPGASGVISGMRKACKVLIYVDVAAAMLDGVVFFRSSNNVILSSGKNGTLEPRYFSRVDGATATVDEDASKTVTPDKHDATPRNPTPLPPGKGDGGPTKAAASRQLRPRSGWMFNDDATAEMTCNGGGGGLTAGAXXXXXXXXAIGGRRNEAPAKSGGRD-ARRGATDPPVDVYAVLDFEATCEDEKIDGGRFGPMEVIEFPTVLLDAHSLKVLDEFRVYVRPVRHPVLTPFCTSLTGIEQSTVDGGVLFEEALSQHTEFLRRNSCLPGQERSCLFVTCGNWDLKTMMPAQCKLIDAPVPPHFNSWANIKEVFRDEMYRANRQSQRRPR--GGKLSD---MPAMLSALGLVLEGRHHSGLDDCRNIARIAIQLCRRSRR 554          
BLAST of mRNA_F-serratus_M_contig1485.3333.1 vs. uniprot
Match: A0A7S3XZY4_HETAK (2'-phosphotransferase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZY4_HETAK)

HSP 1 Score: 266 bits (681), Expect = 5.480e-81
Identity = 170/444 (38.29%), Postives = 236/444 (53.15%), Query Frame = 1
Query:    1 QLSKKLMWALRHGAEELRLNMRPDAFVHLDELLDNPRFRGVSIQQVQHVVAVDEKYRFSIMRDRAEGGGLLIRADQGHSIGGVILEEQLLTRVDRAEDIPICVHGTSLAIWPSIRANGLRRMNRMHIHFAAGLPRAKGMVSGIRRKCRVFIYVDVALAMANGIVFFRSRNNKSAPPKTLQWRRGQDPRAIEAGVDPRAKTVRSTQENDNKCTFMQLRGGKLCRTCSMSRGKHNRPSTTGARGRVHVGIFPSALSLFS---RWPISFGPMEIIEFPTILMDARSLQVLDEFRAYVRPVRNPILTPFCTSLTGIQQ-LIDRAILFEEALQRHTEFMRRNSCLPGQERSCLFLTCGNWDLRKMLPSQCELIGVDVPEHFKTWANIKDVF--WEVALSRSPNWWGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIVQALCR 1314
            +LSKKL +ALRHGA EL L +  D +V +++LL    F+  +  QV+  V +  K RFS+ +     G   IRA+QGHS+G V+ +E LL R+         VHGT    W +IR  GL+ M R HIHFA+GLP   G++SG+RR   ++I++D+  A+ +GI FF S N     P     R    P      VD R  T R  Q   N     + RG                     ++ RV       A   F           P EIIEFPT+L+D ++ +++ EF +YVRP  NP L+ FCT LTGIQQ  +D+A LF E L+ H ++M  N  LP QE+SCLF+T  + DL  MLP QC L+G+  P +F TW ++K  +  W +A +R+     GK     ++P ML+ L L  + R  SG DD +N AR+  AL R
Sbjct:   37 KLSKKLSYALRHGAVELGLEISRDGYVAVNQLLQLKMFKPATFYQVKAAVEICPKQRFSLQK---VDGVWKIRANQGHSVGQVVKDEDLLQRITSEAGFSTVVHGTYYRCWDAIRTEGLKVMTRNHIHFASGLPSDNGVMSGMRRSAEIWIFLDLKRALEDGIEFFLSSNGVILTPG--DQRGVLSPLYFSRVVDSR--TQREIQACLNTSNTTENRGAXXXXXXXXXHY---------SKQRVQEEYDYYAFLDFEATCEQNADIDPQEIIEFPTVLVDCKTYEIVSEFHSYVRPTANPCLSAFCTELTGIQQEQVDQAPLFPEVLKMHQDWMEANHILPRQEKSCLFITDSDADLGAMLPGQCALLGLPAPRYFGTWLDLKAAYREWALAGARAEGRRPGKFGT--RLPDMLAGLGLCPDGRAHSGIDDARNLARVGVALAR 462          
BLAST of mRNA_F-serratus_M_contig1485.3333.1 vs. uniprot
Match: A0A813AT78_9DINO (2'-phosphotransferase (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AT78_9DINO)

HSP 1 Score: 215 bits (547), Expect = 8.060e-61
Identity = 162/499 (32.46%), Postives = 231/499 (46.29%), Query Frame = 1
Query:    4 LSKKLMWALRHGAEELRLNMRPDAFVHLDELLDNPRF--RGVSIQQVQHVVAVDEKYRFSIMRDRAEGGGLLIRADQGHSIGGVILEEQLLTRVDRAEDIPICVHGTSLAIWPSIRANGLRRMNRMHIHFAAGLPRA--KGMVSGIRRKCRVFIYVDVALAMANGIVFFRSRN-------NKSAPPKTLQ------------------WRR------------------------GQDPRAIEAGVDPRAKTVRSTQENDNKCTFMQLRGGKLCRTCSMSRGKHNRPSTTGARGRVHVGIFPSALSLFSRWPISFGPMEIIEFPTILMDARSLQVLDEFRAYVRPVRNPILTPFCTSLTGIQQLI-DRAILFEEALQRHTEFMRRNSC----LPGQERSCLFLTCGNWDLRKMLPSQCELI--------GVDVPEH-FKTWANIKDVFWEVALSRSPNWWGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIV 1299
            + K   W LRHGA  + +++R D +V + +LL        G + +++ H+V  ++K R+ IMR   EGG   IRA QGHSI GV  E+ LL  +   E++P+C HGT L  W  I+ +GL RM R HIHF          G +SG+R  C+V +++DV LAMA+GI F+R+ N       + +AP   L                   W R                        G+ P A+ +  D  A     T++     +++    G          G    P     R  + +    +     S  P    P EIIEFP++++D RS  ++ EF+AYVRP  +P LTPFCT LTGI Q + D A  F   LQR   ++           G+  +CL +TCG+WDLRK LP+Q + +        G  +P H F  W N+K  F + A   +P            M  ML  L L +  R  SG DDC+N A IV
Sbjct:   16 VGKAASWVLRHGAPSVGVDIRSDGYVKMKDLLRCSAMTKHGATREEMVHIVETNDKKRYEIMR---EGGVEYIRAVQGHSIEGVDTEK-LLVEIKSPEELPMCCHGTYLQAWEFIKESGLSRMARNHIHFVESFDSHADSGAISGLRGNCQVLVFIDVPLAMAHGISFYRATNGVVLSVGDPAAPDGNLHPAFFLRVEDAKTHSPLAGWSRPALPSWHAAATAAQTAAGAGAAGEGRTPAAVTSAEDGAAAVTAGTEQVPAHSSYV----GHAPMPAGPPAGAPKSPF----RYAIVLDFEATCEDSASGRPAP-SPQEIIEFPSVVVDLRSGGLVSEFQAYVRPTHHPALTPFCTELTGISQKVTDAADQFPGVLQRWAAWVEGQGLDAVGAGGRPIACL-VTCGDWDLRKCLPAQAKAVDPPIDLYFGEGLPTHLFSRWINLKTAF-KAAYGSAPR----------GMVGMLEELGLPLTGRHHSGIDDCRNLAAIV 489          
BLAST of mRNA_F-serratus_M_contig1485.3333.1 vs. uniprot
Match: A0A0G4H1V6_9ALVE (2'-phosphotransferase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H1V6_9ALVE)

HSP 1 Score: 213 bits (543), Expect = 2.390e-58
Identity = 173/499 (34.67%), Postives = 234/499 (46.89%), Query Frame = 1
Query:    4 LSKKLMWALRHGAEELRLNMRPDAFVHLDELLDNPRFRGVSIQQVQHVVAVDEKYRFSIMRDRAEGGGLLIRADQGHSIGGVILEEQLLTRVDRAEDIPICVHGTSLAIWPSIRANGLRRMNRMHIHFAAGLPRAKGMVSGIRRKCRVFIYVDVALAMANGIVFFRSRNNKS----------APPKTLQWRRGQDPRAIEAGVDPRAKTVRSTQENDNKCTFMQLRGGKLCRTCSMSRGKHNRPSTTGARGRVHV--------GIFPS--ALSLFSRWPISF---------------GPMEIIEFPTILMDARSL-----------QVLD-EFRAYVRPVRNPILTPFCTSLTGIQQ-LIDRAILFEEALQRHTEFM-RRNSCLPGQERSCL-----------FLTCGNWDLRKMLPSQCELIGVDVPEHFKTWANIKDVFWEVALSRSPNWWGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIVQALCRRL 1320
            +SKK+ W LRHGA ++ L+MR D FV + +LL  P F+GV    V+ VV  DEK R++I   R E G   IRA+QGHS    + EE +LTRV+ A  +P+CVHGT       I  +GL  M R H+HFA GLP A G++SG+R+   V I++DV  AM  G VFF S N             +P   L+  R    R +   V PR +    T E     +    RGGK  R    S+G     S   A G   V        G+ P   A +     P  F                P EIIEFP + + + +            Q+ +  F +YVRP   P L+ FCT+LTGIQQ  ++ A  F E      ++M +R S +     S +           F+TCG++D+R  L  QC   GV  P     + N+K VF E+ +           R++  M  ML  L L +E R  SG DD KN AR+  AL  R 
Sbjct:  247 ISKKMSWILRHGANQVGLSMRSDGFVLMRDLLALPNFKGVLEGAVRLVVDRDEKTRYTI---REEDGKTWIRANQGHSAHMKVEEEGMLTRVNEASQLPVCVHGTRSVALEGIMKDGLLPMGRKHVHFAQGLPGADGVISGMRQSADVVIHLDVQKAMKAGAVFFLSDNGVVLSDGVGGQGFSPEFFLKVER----REVTRNVPPRTE---ETGERGGGPSVGAQRGGKG-RRWGGSKG-----SADAAAGSAAVVAPSASSSGLVPHPHAAASICEGPFEFLVLDFEATCIEGQKIDPQEIIEFPVVPVSSDATRPPWRYEDTAGQIRNLHFHSYVRPEHFPELSEFCTNLTGIQQETVNAAPPFREVFASFCDWMAKRGSDVQKPFASAISEPVEARVPYVFVTCGDFDVRSCLKQQCRTAGVQCPPGVACYVNMKRVFSELMV-----------RESNGMEHMLGVLGLELEGRHHSGIDDAKNLARVWIALMERF 718          
BLAST of mRNA_F-serratus_M_contig1485.3333.1 vs. uniprot
Match: A0A1R2BJD2_9CILI (2'-phosphotransferase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BJD2_9CILI)

HSP 1 Score: 189 bits (479), Expect = 1.090e-51
Identity = 138/440 (31.36%), Postives = 208/440 (47.27%), Query Frame = 1
Query:    1 QLSKKLMWALRHGAEELRLNMRPDAFVHLDELLDNPRFRGVSIQQVQHVVAVDEKYRFSIMRDRAEGGGLLIRADQGHSIGGVILEEQLLTRVDRAEDIPICVHGTSLAIWPSIRANGLRRMNRMHIHFAAGLPRAKGMVSGIRRKCRVFIYVDVALAMANGIVFFRSRNNKSAPPKTLQWRRGQDPRAIEAGVDPRAKTVRSTQENDNKCTFMQLRGGKLCRTCSMSRGKHNRPSTTGARGRVHVGIFPSALSLFSRWPISFGPM---EIIEFPTILMDARSLQVLDEFRAYVRPVRNPILTPFCTSLTGI-QQLIDRAILFEEALQRHTEFMRRNSCLPGQERSCLFLTCGNWDLRKMLPSQCELIGVDVPEHFKTWANIKDVFWEVALSRSPNWWGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIVQAL 1308
            ++SKKL WALRHG  EL L++    +V+L ELL    F  V+ + +  +VA DEK RFS+++   E G   IRA+QGH+I  V  +E+LLT +    D PI VHGT+ A W SI+  GL +M R HIHFA GLP    ++SG R  C VFI++D+ LA++ G+ F+ S N                                           +    G        S+   N+ S       +    F   +  F    I  G +   EIIEFP  +++A++  V   F +Y++P   P +T FCT+LTGI Q +++      E LQ    F+  N+ +  +    +F+TCG+WDL+  L ++ +   + +  +F  W NIK +         P + GG       M  +LS   +    +  SG DD  N    ++ L
Sbjct:   12 KVSKKLSWALRHGIGELGLSINAAGYVNLQELLSKREFSSVTPEIITTLVANDEKTRFSLLQ---ENGITFIRANQGHTISQV-KDEELLTPILNPNDYPIVVHGTNKASWKSIKTRGLYKMQRNHIHFARGLPGDNQVISGARVNCEVFIFIDLPLAISEGMKFYVSENQ----------------------------------------VILSSGFGGFISPKYFSKVIINKISVPIDYKPIDFDYF--LILDFEANCIENGTLPCQEIIEFPVKVLNAQTFNVEYIFHSYIQPDIVPNITDFCTNLTGITQDMVNGQYKLPEVLQNFHNFLVTNNIIQTR---WIFVTCGDWDLKTCLRNEAQYKKLPINNYFNAWINIKFLI--------PKFKGG-------MMELLSLFSIPHSGKHHSGIDDVTNITECLKYL 387          
BLAST of mRNA_F-serratus_M_contig1485.3333.1 vs. uniprot
Match: A0A0G4EHX6_VITBC (2'-phosphotransferase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EHX6_VITBC)

HSP 1 Score: 172 bits (437), Expect = 3.270e-47
Identity = 98/229 (42.79%), Postives = 136/229 (59.39%), Query Frame = 1
Query:    1 QLSKKLMWALRHGAEELRLNMRPDAFVHLDELLDNPRFRGVSIQQVQHVVAVDEKYRFSIMRDRAEGGGLLIRADQGHSIGGVILEEQLLTRVDRAEDIPICVHGTSLAIWPSIRANGLRRMNRMHIHFAAGLPRAKGMVSGIRRKCRVFIYVDVALAMANGIVFFRSRNNK--------SAPP-----------KTLQWRRGQDPRAI--EAGVDPRAKTVRSTQEND 624
            QLS+ L   LRH A +  LN+RPD FV +D+L+   RF   S+QQ+  VV  ++K RFS+  D  + G   IRA+QGHS G  +  ++L  R++ AEDIP+CVHGTS   W +IR  GL++M R HIHFA GLP   G++SG+R  C VFIY+DVA AM  G+V +RS NN         + PP           +TL    GQ P+A   +A  +  A+ +R+ +E +
Sbjct:   35 QLSRSLSMVLRHKAADFGLNVRPDGFVRVDDLMRLSRFTDYSVQQLHSVVENNDKQRFSLWTD--DEGTEWIRANQGHSAGVNVSADELYERIESAEDIPVCVHGTSEGAWEAIRRQGLKKMGRQHIHFAPGLPGESGVISGMRYSCSVFIYLDVAKAMERGVVLYRSANNVILTEGLDGTIPPNLFASVSHADGRTLWPGNGQQPQADVPQAADEAAAREMRARRERE 261          
BLAST of mRNA_F-serratus_M_contig1485.3333.1 vs. uniprot
Match: A0A078ANZ7_STYLE (2'-phosphotransferase n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078ANZ7_STYLE)

HSP 1 Score: 177 bits (450), Expect = 4.740e-47
Identity = 142/464 (30.60%), Postives = 215/464 (46.34%), Query Frame = 1
Query:    4 LSKKLMWALRHGAEELRLNMRPDAFVHLDELLDNPRFR--------------GVSIQQVQHVVAVDEKYRFSIMRDRAEGGGLL--IRADQGHSIGGVILEEQLLTRVDRAEDIPICVHGTSLAIWPSIRANGLRRMNRMHIHFAAGLPRAKGMVSGIRRKCRVFIYVDVALAMANGIVFFRSRNNKSAPPKTLQWRRGQDPRAIEAGVDP--RAKTVRSTQENDNKCTFMQLRGGKLCR---TCSMSRGKHNRPSTTGARGRVHVGIFPSALSLFSRWPISFGPMEIIEFPTILMDARSLQVLDEFRAYVRPVRNPILTPFCTSLTGIQQL-IDRAILFEEALQRHTEFMRRNSCLPGQERSCLFLTCGNWD----LRKMLPSQCELIGVDVPEHFKTWANIKDVFWEVALSRSP-----NWWGGKRRQTCK-MPAMLSALRLTVEWRQDSGRDDCKNSARIV 1299
            +SK L W LRHGA EL L++R D +V +DE+L   R +               V    ++ +VA ++K RF ++ +  E G  +  IRA QGH+I   I  E+LLT +         +HGT L ++  I   GL +M R HIH A G+P  KG++SG+R  C + + V++A AM  G V F   NNK                 +  G+D    +K  R   +        Q     +C     C    G  N                           ++F   EIIEFP +++D +S+Q++ EF+ YV+P  +P LT FCT LTGI+Q  +D  +  +EA+Q+   F+ +   L  +    +FL+CG++D     R+ L  Q      ++P + K W NIK VF      +S      ++    ++ T   M  +L    L +E R  SG DD +N AR V
Sbjct:   21 ISKSLSWILRHGALELGLSIRTDGYVPIDEILAAQRIKCNQSELQNECFIELKVDFDMIKAIVASNDKQRFQLISEINEEGVEVHYIRATQGHTIQ-TISNEELLTPIIDPFGFDEVIHGTYLKVFNLIMETGLNKMARNHIHMAPGMPTKKGVISGMRASCEIVVEVNMAKAMYQGKVPFYISNNKVL---------------LSPGIDGVLSSKYFRQVVDIKRHLMLYQAPLDYICVYDFECQCEEGTKN---------------------------LTFN--EIIEFPVVVIDVKSMQIIGEFQTYVKPTIHPKLTEFCTKLTGIEQSQVDGGVPIKEAIQQVHAFLEKLGVLQTE---FVFLSCGDFDGNQIRREALHKQ-----FNIPSYLKRWINIKKVFPLHLFDKSKPEQQIDFIKNVKKSTVSGMGELLKLSGLELEGRHHSGIDDARNIARCV 431          
BLAST of mRNA_F-serratus_M_contig1485.3333.1 vs. uniprot
Match: A0A7S1SRY6_9CHLO (2'-phosphotransferase n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SRY6_9CHLO)

HSP 1 Score: 162 bits (410), Expect = 5.140e-44
Identity = 83/181 (45.86%), Postives = 119/181 (65.75%), Query Frame = 1
Query:    4 LSKKLMWALRHGAEELRLNMRPDAFVHLDELLDNPRFRGVSIQQVQHVVAVDEKYRFSIMRDRAEGGGLLIRADQGHSIGGVILEEQLLTRVDRAEDIPICV-HGTSLAIWPSIRANGLRRMNRMHIHFAAGLPRAKGMVSGIRRKCRVFIYVDVALAMANGIVFFRSRN----NKSAPPK 531
            LS+KL   LRH A++  L++RPD FV L E+L  P FRG+ I+QV+ +VA D K R+S+  D ++G  +LIRA+QGHSI  +  EE + +++   + +P CV HGT ++ WPSI+  GL RM R H+H A GLPR  G++SG+R  C V I++D+  AMA GI F+ S N    +   PP+
Sbjct:    4 LSRKLTKLLRHSAKQRGLHIRPDGFVQLSEVLSLPEFRGLGIEQVRQIVAADNKQRYSLNEDHSDG--VLIRANQGHSIQSLD-EEAMFSKIVGQDQLPACVVHGTYMSSWPSIKEQGLLRMKRTHVHMAKGLPRENGVISGMRGSCEVVIHIDIRAAMAAGIEFYESANGVILSSEVPPR 181          
BLAST of mRNA_F-serratus_M_contig1485.3333.1 vs. uniprot
Match: K3WIU9_GLOUD (2'-phosphotransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIU9_GLOUD)

HSP 1 Score: 155 bits (393), Expect = 2.470e-41
Identity = 81/176 (46.02%), Postives = 115/176 (65.34%), Query Frame = 1
Query:    1 QLSKKLMWALRHGAEELRLNMRPDAFVHLDELLDNPRFRGVSIQQVQHVVAVDEKYRFSIMRDRAEGGGLLIRADQGHSIGGVILEEQLLTRVDRAEDIPICVHGTSLAIWPSIRANGLRRMNRMHIHFAAGLPRAKGMVSGIRRKCRVFIYVDVALAMANGIVFFRSRNNKSAPP 528
            +LSK L +ALRHGAEEL+L+MRP  +V L +LL +P+F+  + Q+++HVV  +EK RF+I  D   G    IRA+QGHS+  ++ +++LLT ++  + I  C+HGT +  W SIR  GL RM R HIHF         +VSG+R  C + +Y+D  LA+A+GI FFRS NN    P
Sbjct:   22 RLSKLLAFALRHGAEELKLDMRPSGYVELTQLLRHPKFKHTTEQEIEHVVRANEKKRFTIATDET-GTIKFIRANQGHSLQ-LVQDDELLTPLETPDAIDKCIHGTYIKFWESIRETGLSRMTRNHIHFTTQEVVEGDVVSGMRTDCNLLLYIDFPLALADGIKFFRSSNNVVLSP 195          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1485.3333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZZ0_ECTSI1.170e-15854.892'-phosphotransferase n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5L3C1_9PHAE2.270e-13447.072'-phosphotransferase n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A7S3XZY4_HETAK5.480e-8138.292'-phosphotransferase (Fragment) n=1 Tax=Heterosig... [more]
A0A813AT78_9DINO8.060e-6132.462'-phosphotransferase (Fragment) n=1 Tax=Symbiodin... [more]
A0A0G4H1V6_9ALVE2.390e-5834.672'-phosphotransferase n=1 Tax=Chromera velia CCMP2... [more]
A0A1R2BJD2_9CILI1.090e-5131.362'-phosphotransferase n=1 Tax=Stentor coeruleus Ta... [more]
A0A0G4EHX6_VITBC3.270e-4742.792'-phosphotransferase n=2 Tax=Vitrella brassicafor... [more]
A0A078ANZ7_STYLE4.740e-4730.602'-phosphotransferase n=1 Tax=Stylonychia lemnae T... [more]
A0A7S1SRY6_9CHLO5.140e-4445.862'-phosphotransferase n=1 Tax=Tetraselmis chuii Ta... [more]
K3WIU9_GLOUD2.470e-4146.022'-phosphotransferase n=1 Tax=Globisporangium ulti... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1485contigF-serratus_M_contig1485:92176..101297 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score461.1
Seed ortholog evalue5.9e-127
Seed eggNOG ortholog2880.D7FZZ0
Preferred nameERI3
KEGG koko:K03037,ko:K05544,ko:K08876,ko:K10669,ko:K14007,ko:K18416,ko:K18418,ko:K20407
KEGG Pathwayko03050,ko04141,ko04150,ko05169,map03050,map04141,map04150,map05169
KEGG ModuleM00341,M00404
Hectar predicted targeting categoryother localisation
GOsGO:0000215,GO:0000394,GO:0001932,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005886,GO:0006139,GO:0006259,GO:0006388,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008380,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0016020,GO:0016070,GO:0016441,GO:0016458,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0031047,GO:0031323,GO:0031399,GO:0032268,GO:0034470,GO:0034641,GO:0034660,GO:0035194,GO:0040029,GO:0042325,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043549,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045859,GO:0046483,GO:0048519,GO:0048583,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051174,GO:0051246,GO:0051252,GO:0051338,GO:0051604,GO:0060147,GO:0060255,GO:0060966,GO:0060968,GO:0065007,GO:0065009,GO:0070920,GO:0071704,GO:0071944,GO:0080090,GO:0090065,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097428,GO:0106035,GO:0140098,GO:0140101,GO:1900368,GO:1901360,GO:1901564
EggNOG free text desc.tRNA 2'-phosphotransferase activity
EggNOG OGsCOG1859@1,COG5018@1,KOG0542@2759,KOG2278@2759
EC1.3.1.89,2.7.1.160
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03016,ko03019,ko03036,ko03051,ko04131
Exons12
Model size1329
Cds size1311
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929458.9411674-UTR-F-serratus_M_contig1485:92175..921931622929458.9411674-UTR-F-serratus_M_contig1485:92175..92193Fucus serratus maleUTRF-serratus_M_contig1485 92176..92193 +
1690962862.7691169-UTR-F-serratus_M_contig1485:92175..921931690962862.7691169-UTR-F-serratus_M_contig1485:92175..92193Fucus serratus maleUTRF-serratus_M_contig1485 92176..92193 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929458.954727-CDS-F-serratus_M_contig1485:92193..923221622929458.954727-CDS-F-serratus_M_contig1485:92193..92322Fucus serratus maleCDSF-serratus_M_contig1485 92194..92322 +
1690962862.7798483-CDS-F-serratus_M_contig1485:92193..923221690962862.7798483-CDS-F-serratus_M_contig1485:92193..92322Fucus serratus maleCDSF-serratus_M_contig1485 92194..92322 +
1622929458.9693696-CDS-F-serratus_M_contig1485:92778..929691622929458.9693696-CDS-F-serratus_M_contig1485:92778..92969Fucus serratus maleCDSF-serratus_M_contig1485 92779..92969 +
1690962862.8047402-CDS-F-serratus_M_contig1485:92778..929691690962862.8047402-CDS-F-serratus_M_contig1485:92778..92969Fucus serratus maleCDSF-serratus_M_contig1485 92779..92969 +
1622929458.9806576-CDS-F-serratus_M_contig1485:93372..934781622929458.9806576-CDS-F-serratus_M_contig1485:93372..93478Fucus serratus maleCDSF-serratus_M_contig1485 93373..93478 +
1690962862.8190525-CDS-F-serratus_M_contig1485:93372..934781690962862.8190525-CDS-F-serratus_M_contig1485:93372..93478Fucus serratus maleCDSF-serratus_M_contig1485 93373..93478 +
1622929458.994508-CDS-F-serratus_M_contig1485:93959..940281622929458.994508-CDS-F-serratus_M_contig1485:93959..94028Fucus serratus maleCDSF-serratus_M_contig1485 93960..94028 +
1690962862.8299518-CDS-F-serratus_M_contig1485:93959..940281690962862.8299518-CDS-F-serratus_M_contig1485:93959..94028Fucus serratus maleCDSF-serratus_M_contig1485 93960..94028 +
1622929459.0385332-CDS-F-serratus_M_contig1485:98232..983041622929459.0385332-CDS-F-serratus_M_contig1485:98232..98304Fucus serratus maleCDSF-serratus_M_contig1485 98233..98304 +
1690962862.838654-CDS-F-serratus_M_contig1485:98232..983041690962862.838654-CDS-F-serratus_M_contig1485:98232..98304Fucus serratus maleCDSF-serratus_M_contig1485 98233..98304 +
1622929459.053114-CDS-F-serratus_M_contig1485:98329..983601622929459.053114-CDS-F-serratus_M_contig1485:98329..98360Fucus serratus maleCDSF-serratus_M_contig1485 98330..98360 +
1690962862.8468733-CDS-F-serratus_M_contig1485:98329..983601690962862.8468733-CDS-F-serratus_M_contig1485:98329..98360Fucus serratus maleCDSF-serratus_M_contig1485 98330..98360 +
1622929459.0695121-CDS-F-serratus_M_contig1485:98469..985321622929459.0695121-CDS-F-serratus_M_contig1485:98469..98532Fucus serratus maleCDSF-serratus_M_contig1485 98470..98532 +
1690962862.8568635-CDS-F-serratus_M_contig1485:98469..985321690962862.8568635-CDS-F-serratus_M_contig1485:98469..98532Fucus serratus maleCDSF-serratus_M_contig1485 98470..98532 +
1622929459.0883448-CDS-F-serratus_M_contig1485:98916..989711622929459.0883448-CDS-F-serratus_M_contig1485:98916..98971Fucus serratus maleCDSF-serratus_M_contig1485 98917..98971 +
1690962862.8666306-CDS-F-serratus_M_contig1485:98916..989711690962862.8666306-CDS-F-serratus_M_contig1485:98916..98971Fucus serratus maleCDSF-serratus_M_contig1485 98917..98971 +
1622929459.1041718-CDS-F-serratus_M_contig1485:99139..993421622929459.1041718-CDS-F-serratus_M_contig1485:99139..99342Fucus serratus maleCDSF-serratus_M_contig1485 99140..99342 +
1690962862.8813283-CDS-F-serratus_M_contig1485:99139..993421690962862.8813283-CDS-F-serratus_M_contig1485:99139..99342Fucus serratus maleCDSF-serratus_M_contig1485 99140..99342 +
1622929459.115729-CDS-F-serratus_M_contig1485:99521..996291622929459.115729-CDS-F-serratus_M_contig1485:99521..99629Fucus serratus maleCDSF-serratus_M_contig1485 99522..99629 +
1690962862.8911421-CDS-F-serratus_M_contig1485:99521..996291690962862.8911421-CDS-F-serratus_M_contig1485:99521..99629Fucus serratus maleCDSF-serratus_M_contig1485 99522..99629 +
1622929459.1286173-CDS-F-serratus_M_contig1485:100562..1006661622929459.1286173-CDS-F-serratus_M_contig1485:100562..100666Fucus serratus maleCDSF-serratus_M_contig1485 100563..100666 +
1690962862.8998272-CDS-F-serratus_M_contig1485:100562..1006661690962862.8998272-CDS-F-serratus_M_contig1485:100562..100666Fucus serratus maleCDSF-serratus_M_contig1485 100563..100666 +
1622929459.1451607-CDS-F-serratus_M_contig1485:101117..1012971622929459.1451607-CDS-F-serratus_M_contig1485:101117..101297Fucus serratus maleCDSF-serratus_M_contig1485 101118..101297 +
1690962862.9136345-CDS-F-serratus_M_contig1485:101117..1012971690962862.9136345-CDS-F-serratus_M_contig1485:101117..101297Fucus serratus maleCDSF-serratus_M_contig1485 101118..101297 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1485.3333.1prot_F-serratus_M_contig1485.3333.1Fucus serratus malepolypeptideF-serratus_M_contig1485 92194..101297 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1485.3333.1

>prot_F-serratus_M_contig1485.3333.1 ID=prot_F-serratus_M_contig1485.3333.1|Name=mRNA_F-serratus_M_contig1485.3333.1|organism=Fucus serratus male|type=polypeptide|length=437bp
MWALRHGAEELRLNMRPDAFVHLDELLDNPRFRGVSIQQVQHVVAVDEKY
RFSIMRDRAEGGGLLIRADQGHSIGGVILEEQLLTRVDRAEDIPICVHGT
SLAIWPSIRANGLRRMNRMHIHFAAGLPRAKGMVSGIRRKCRVFIYVDVA
LAMANGIVFFRSRNNKSAPPKTLQWRRGQDPRAIEAGVDPRAKTVRSTQE
NDNKCTFMQLRGGKLCRTCSMSRGKHNRPSTTGARGRVHVGIFPSALSLF
SRWPISFGPMEIIEFPTILMDARSLQVLDEFRAYVRPVRNPILTPFCTSL
TGIQQLIDRAILFEEALQRHTEFMRRNSCLPGQERSCLFLTCGNWDLRKM
LPSQCELIGVDVPEHFKTWANIKDVFWEVALSRSPNWWGGKRRQTCKMPA
MLSALRLTVEWRQDSGRDDCKNSARIVQALCRRLGR*
back to top

mRNA from alignment at F-serratus_M_contig1485:92176..101297+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1485.3333.1 ID=mRNA_F-serratus_M_contig1485.3333.1|Name=mRNA_F-serratus_M_contig1485.3333.1|organism=Fucus serratus male|type=mRNA|length=9122bp|location=Sequence derived from alignment at F-serratus_M_contig1485:92176..101297+ (Fucus serratus male)
CAGCTTTCGAAGAAATTGATGTGGGCGTTGAGGCACGGAGCTGAGGAGCT ACGCCTCAACATGCGCCCAGACGCCTTCGTGCATCTCGACGAGCTGCTCG ACAACCCGCGCTTTCGCGGGGTATCCATTCAACAGGTCCAACACGTGGTG GGTCGGTTGTTGTTACACCTCTTGGCGTTCTTGCAGGGGGGGGCAGGTGT AACCCCTCCCCTCGGGGATGTAGGACCACTGTCCCCTGTCAATATTTCCC GCGGGGAGGGGGAACATTCGCGTTCTCCGTGTTTGTTGAAACTGATTTTG TTCCCTATATGTGACGCCGTCCTGTCGTTCGCCATGGACTTGACTCATTC ATCTGGTTTATAACACTTTTTTTTAGCGCAGGTACCGCGTGCTGTATGCG ACGAAACATCGAGAGCCTTACGCGGAGATCTGACATTACCACTGGTTCAT AACACCTTTTATTTTAGCACGGGGGCCGCGTGCTGTATGCGACGAAAAAT CGAGGGCCTTACGCAGACATCTGACTTGATGTTCCCCCGGCAAAATGGAA TGAAATGGAACGGCAAACTTGAAAACGAAAAATATTAAACCCCCTGGGTA AAGGTTGCGGTGGACGAAAAGTATCGTTTCTCGATCATGCGCGATCGAGC GGAAGGCGGTGGTCTGCTCATCCGGGCGGACCAAGGTCATTCGATCGGGG GGGTCATCCTCGAGGAGCAGCTCCTGACCAGGGTCGATCGCGCCGAGGAC ATCCCCATCTGCGTGCACGGGACATCTCTCGCCATCTGGCCCAGGTGGAA AAACTAAATATTATTTGTATTTCTTGCCGGAGCGAAAGCCATCCAGAGCC TTCTTGCACTCCGCGACACCCCCCCCCCCCCGGCGCCTTGCGACGTACAG AAGCCTTCCCCGTAACTGCCTTTCCCGGCATTGTGAACTCCTGGGGGTCG AACCAATCTTCTCACACCATACGTTAAAAAAACTAAGCACCGATGCCACC TCGACTACAGCTGTTCCGAGAATGGTCGATCGGCGTGCCCCTTAGGTTGG TGGTTGGTCAGTGAGTTGCCCAGGAGGGAGCAAACTCTGCGGATTTTGAC CAAGAGGTTGATGAGATGCTCGACGACGCTTGCGCGGCCTGCACCTTCTC GCCCTGTGCCACAACTCTACCCGATCGTGATCGGCCCTCGTGTTCAGTAT CCGGGCGAATGGACTTCGCCGTATGAACCGCATGCACATCCATTTCGCGG CGGGTCTGCCTAGAGCGAAGGGCATGGTCAGCGGCATCCGGCGGAAGTGT CGGGTATGCGCCATGTTTCCCAGCTAGTATCTGCGCTGCTCAGTGCGCGC GTCGAAATGATTGCATTGCATGTACACCGCCCGTTGCTTCTCCGGCTTCG CGAAGACTCAACTCACGCTGGTACTAGACCTGTGGAGACACGGTGCCGGT TACGGTAGTCGTTAAGGTTTATCTGCTTATCCCTTCCGCAGCTACACGCA CTCGGGAACAGTTAGTACAGCAGAGCGGGCTTGGATGAAGATCTCGCTAC AGTACTGTACCGTACAAGGTTTTCCTCGTACGATGGCTTCGAGCTGCCTC TCTGTTACCAAGAAAGATCAGGGGGAAATTCCATCCGATCCCCGGGGTTC GTAACAAACAGCATTATTATTGTAATATTACTATGATATTTGTACACTCA CTCATTAGCGTGGTGTGAGGCTTGTTTGCCCACGCCGTTACACCCCCACC CCCCTCCATTACCTTCCATTACCCGCCACCGCAGGTTTTCATCTACGTCG ACGTCGCCTTGGCCATGGCGAATGGGATCGTCTTCTTCCGATCGCGCAAC AACGTCATTCTCACATGTGAAAGATACTCTCCTGCCTTCTGCGCTATGAT AGCATAATGTAGTATACTATAGTAATATTGTACGTCGTATATATTCTTCA GCGAGGGTAGAATAATACCGGGACCGCCTCCCCCCCTTCCCCAACTCCTC CCCATGCAGCTTCCAAACTATAAACCGTAATCGATCAATCAGATATGAAA AGTGACCGCGTGTTGTAAATACCACTTATGTGAAAAACACTCGGATAACT ATTAATAATTGCTTGTTACAGGTGTCAAAAACTTGCAAATATTGCGTCCT CCAGCCATCAGTAGATGACTGTTGTGTGTGCATGCCCTGAAGGGTGCCTT ATGCCGAATCACATACCGCACATACTTGAGGCTTGTTTTCGTTACCCGTA GAATTGGTGACATGTTCTTTTCCTTTTCTCGCGCCCTCTACAGCTTCGTG CCGAATTTTCTCCTAATTTGAATCGTTCCGATCCCCCGATCCCGTCCGGA ACATCGCGAAGACGCCGAATCTGTCGCTCGGACCATGAAGTTTAAAGTAA CGCGGGGGGGGTTAAATATCTCCCGGGTTTCAGGATAAGGGCGGGCATAC AAAACTGCTCCTCACGGGGATGGATTGGATAATACATGCTCCAGTTGTAC GCGAGGCCTGATTTGTAATATCCCTTACCCAACCCCCCCATGGGTTTTGT TGGATAATGACGTGACTGATGATGAAATCCCCAGCGGGTATCAAGGGTAC GCTTGACACCTCATACTTCTCAAGCGTGGAGGGCGTGTCGGACTGGAGTC CGAAGGGCGCACCAACCCAAGAAGAAACGGTGGACGTGCCGACAGCCGAT GACCAACATGGTTCCTCCTCGTCCAACGCTGGTAACTGGCAGCCCTGTCT AGAGAACCAGTACTACTAACCACCCATTCCGCATGTGTCGTCCGATCTTC CGACTCAGGAACGCTATCTGCAGGCATGTATGACCATGGCCTACGGTACG ACTGTACCACTGGCTTGTCATTGTATCTATGTTGCCGCGAGCCACGCCCC GGTCGTACATTGGCAAACCACCAAACCAACCCATTACGATTATATATCGC TATGAATGACTTACGTTGGGTTATAAGATAGAGGACACACTTGACACCTC ATACTTCTCTTGCGTGAAAGGCGTTTCGGACTGGAATCCGAAGGCCGCAC CCCCCCAAGAAGAAACGTTGGAGGTGTCGACAGCCGATATCCAACACGGG GCCTCCTCGTCCAAACCGAGTAAGTATTAATAGCAGCCCTGTCTAAGGAA CCTAACCACCCATTTCGCATGTGTCGTCCGATCGTTCGACTCTTAAACCT TATCTGCAGGCATGTATGTCCATGGGTTACGGTCCGACTGTAGCACTTAA GCATTGTGTATGGGTTGCCACGAGTCACGCCCCGGTCGTACATTGGTAAA CCCTCCAACAAATCCATTGCGATTATATAGCGCATGACTGGTTTACGTTG GGTTATAGGATAGAGACACACTTGACGCCTCACACTTCTCTTGCGTTGAA GGCGTGTCGGACTGGAGTCCGAAGACCGCACCAACCCAAGATGAAACGGT GGAAGTGCCGACAGCCGATGACCAACATGGTTCCTGCTCGTCCAACGCTG GTAAGTGGCAGCCTTGTCTAGAGAACCAGCACTACTAACCACCCATTTCG CATGTGTCGTCCGATCTTCCGACTCAGGAACGCTATCTGCAGGCATGTAT GTCCATGACCTACGTTTCGACTGTACCACTGGCTGGTCATCGTATCTGTG TTGCCGCGAGCCACGCCCCGGTCGTACATTGGTAAACCACCGAACCAACC CATTGCGATTATATATCGCCATGAATTATTTATGTTGCGTCATGAGATAG AGGACACACTTGACACATCATACTTCTCTTGCGTGGAAGGCGTTTCGGAC TGGAATCCGAAGGCCGCACCCCCCCAAGAAGAAAAGTTAGAGGTGTCGAC AGCCGATGACCAACACGGGGCCTCCTCGTCCAAAACGAGTAAGTATTTAT AGCACCCCTGTCTAAGGAACCTAACCACCCATTTCATATGTTTCGTCCGA TCTTTCGACTCAGAAACCTTATCTGCAGGCATGTATGCCCATGGGTTACG GTACGACTGTAGCACTCGGCATTGTGTCTGTGTTGCCGCGGGCCCCGCCC CGGTCGTTCATTGTTAAACCATTCAACAAACCCATTGCGGTTATATAGCG CTATGAATGGTTTACGTTGGACTATAGGATTGATGACACTTCACACTTCT CTTGCGTTGAAGGCGTCTCGGACTGGAATCCGAAGGCTGCACCACCCCAA GAAGAAGCGTTAGAGGTGTCGACAGCCGATGACCAACACGGTGCCTCCTC GTCCAACGCGGGTGAGTAGCAATAGAAGGCCTGTCTAAAGAACCAGTTAC TACCCATTTCGCATGTGTCGTCCGATTGTCCGACTCAGGACCCTTATCTG CAAGCATGTATGTTCATGGATTACCGTACAGCTGTGCCACTGGGCATTGT ATCTGTGTTGCCGCGGGCCACGCCCCGGTCGTACATTGGAAAACCGTCAA ACCAACCCATTACGATTATATAGCGCTATGAATGGTTTACGTTGGGTTAC AGGATAGATAACACGCTTGACACTTCACACTTCTCTTGCGTGGAAGGTGT GTCGGACTGGAATCCGAAGGCCGCACCACCCCAAGAAGAAACGTTAGAGG TGTCGACAGCCGATGACCAACACGGTGCCTCCTCGTCCAACGCGGGTAAG TAGTAATAGCAACCCTGTCTAGAGAACCTAACCACCCATTTCGCATGTGT CGTCCGATTTTTCGACTCATAAACCTTGTCTGCAGGCATGTATGTCCATG GGTTACGGTACGACTGTAGCACTCGGGCATTGTATCTGTGTTGCCACGAG CCACGCCCCGGTCGTACATTGGTAAACCATCCAACAAATACACTGCGCTT GTATAGCGCTATGAATGGTTTATGTTGGGTTATATGATAGAGACACACTT GACATCTCACACTTCTCTTGCGTTGAAGGCGTGTCGGACTGGACTTCGAA GGCCGCACCACCCCAAGAAGAAACGTTAGAGGTGTCGACAGCCGATGATC AACACAGTGCCTCCTCGTCCAACGCGGGTGAGTAGTAATAGCAACCCTGT CAAGAGAACCTAACCACCCATTTCGCATGTGTCGTCCGGTCTTCCGACTC AGAAGCCTTATCTGCAGGTATGCATGTTCATAAATTACCGTACGACTGTA GCTCTCGGCACTGTATCTGTGTTGCCGCGAGTCACGCCTCGGTCGTGCAT TGGTAAACCGCCAAACCAACCCATTGCGATTATATAGCGCTATGAATGGT TTACGTTGGGTTTATAGGATATAGAGGGCACGCTTGATACCTCATACTTC TCTTGCGTGGAAGGCGTGTCGGACTGGAATCCGAAGGCCGCACCGCCCCA AGAAAAAACGTCAGAGGTTTCGACAGCCGGTGACCAACACGGTGCCTCCT CGTCAAAAACGGGTAAGTAGTAATAGCAACAGCAGCCCTGTCTCGAGGAC CATTTGTACCGAACACGTATTTCGCATGTGTCGCCCGATATTTCGACCCA GGAACCTTAGCTGGAAGCATGCATGTCCACGGGTTACCGTCACCGTACGA CTGTACCAAGCGGCACTATTGTCTGTGTTGCTGCGAGCCACGCCCCGGTC GAACAAAGGCTGAACAATCAAACCAACCTGTTGCGATTACGCTTGATAGC GCATGAATGGTTCATGTTGGGATTGCCGGTCGGTAGGGTTATAAGCCTAC AGTGGTTTGTAATATGTCTCAGGTCGTAGTAGATACCCCATCGCATCAAA GCCGCAGATCACTCCCCCCGACAAAAACAAACAGAGGTATTTGCCAACCT GTGTTGTCTAAAAAACAAATTACATGAATAAACCATGGGGTTATCATTGT CGGCTGCTCCGTAAAAACAGCTGGTTTTATGCATACACTACAAGTGTGTT TTTGATACCCGTCACGTTGGGCCCAACAGTACTACGCTATGTTCCACTAC GTTCAACGCAGTACTACAGTACAGTACTCCAAGTAGCATCCCTCCGACGT CCTACCTCGTGTCTTTTAGAAAAAGGGGCAGATACAGTCTGTGGCAATAG CACCAAGAAATCAGCGCCGCCCAAGACGTTGCAATGGAGGCGGGGGCAGG ATCCTCGAGCAATAGAGGCCGGCGTCGACGTGTACGCCATCCTGGACTTA GAAGCCACGTGCGAAGACAGTGCGATCGACCCAAGGTGGTGCTTGTTGCT GAAATGTTCTTGTGAGAGTCAAAAGGGTTGTCGCAGGTTTCGACGGAATT GCAGGCCTTCCCTGTGGTGTTTTGATCGGAAACGTTTAGTACAGAGAACG ATAACAAATGCACTTTTATGCAACTCCGCGGAGGCAAGTTGTGCCGCACC TGTAGCAGTAACGGGGGGAGCAGAGTTGGGAAAACAGTGTCATGACAGAT GGTGGTGCGCCAAAATCAAGTTGCTCAAGATTTATCATTTATCTCTCCCA CATATCCGTGGTAACTCCTCAGGGAGTACAAGCAGGACGGTCGGGTTATC ATCTCTCTATTATATGATGAAATTTTTGCCTTACTTAAATTGTCTAGCCG GACCATGATCACCCTACGTCGAAGGCTTGGAATCAAACACTCACCGACAA TGGTGCAACAAGGAAGCCCACCGCGCTGGTGCGAGATTCTTTCGTCGAGC TCACGCACGAGGATGAGTGGCGTGGTTTGCTCGTCGACGAACGGCGCTCT TGGCCACGGAAGTACGTACAATGAAGGTGGCGACATAACAGTGTCACGCG GAAAGCATAACCGCCCTTCGACCACTGGCGCTCGTGGTCGCGTTCAGTGG GACACGGAACAATTTGCCCCCCCCGCCGCCGTGCAGGCGCTTTCGGTTTC CGTTTCTCTCTCCAGCGTTTTTCGTGACAGCAACCGCAACCTTTCCTCGC CTCGAGAGCTTTCCCACAAACATACACACACGCGAACAGCCTGTATCGAA CTAAAAGTAAAAAGCGTTGGCATTTTCCCGTCTGCTCTCTCACTTTTCTC GCGATGGCCCATAAGCTTTGGACCGATGGAGATCATCGAGTTCCCCACGA TCCTGATGGACGCCCGGTCTCTCCAAGTTCTCGACGAGTTCCGCGCGTAC GTTCGCCCAGTGCGGAACCCAATCCTCACCCCATTTTGTACCAGTCTCAC CGGAATCCAGCAGTTGAGTCAACGGAAGGGAAGCGGGGATGGTGGCGGCC TCAGGGAGGGTAAAAGTTGCGACCATCCTCGCTATGCAACCTCGTCCGTA CCGTTCATCTGCGCTCGACAATCCTAAACCTCGCTGAGCCCATACCGTTT ATTTTCCGTTTCTTATCTTTTGTTTCTCTTTCACAACAGCCGATAGTCGA CAGAGCCATTCTGTTCGAGGAAGCTCTGCAGAGGCACACTGAGTTCATGC GGAGGAACTCCTGCCTCCCCGGGCAGGAACGGTCTTGCCTTTTCCTCACG TGTGGTGAGAAGGGAAAGCGAGCGTGTCGTTATTACCGTGCTCTCATCGC CGCTGTTTATTTCCCGCAGTGTTAGATATTTTCACGGCCCAGGGAACCGG TTACCTCTTTTGTGCACTTTTGGGAAGCACCCACCAGCATGACCTGATGA ACTCGGGGATTTGAGCCGATGGCAGTTGACTGTTTAGATGGAAATCCGCG TGGAATGGGAGAGAGAGTTCGGACAGCCGCACCTCTGTCGCGAGACCAAA GTATGGACTCGAACGGGATAACGTACGTACGATTTGTATCGCTGTTCAGT TGGACCACGCGTAGGGTACCATACCAAAAGCGGCTGAAGCCCCAGGTGCT GAAGGGCTCTGTCTTCACTAGAGTTGTACTGAGGTTACAAGTTATTGTGG CCCTGTAATGAAGTAGCAATACCATGCACTGCCCTAGGTAACCTTACCTC TAGAAGTGATGTGAAAGCGTTTTTTTTTGTGAAAAAGAACAATCTTTGCT GAAGAAGCAACACCGCAATTCTGACGTAGGAGAGTTTTTTTTTCTGACGT GGCGGTACCTTTGCTCTCAGGTCGTGATACCTTACTCAGGTAATAAAATA TAGCAAAACGGTAGACTAAAAATATCTAAACTGAAGCAGCTGGACCTTTT CTCGAAGTAGCAAAGCATTTTCTTTTATTACGTGGCGAGTGCTTTTTCCC CCGAAGTAGCACCTCCACTCTCCAAAACGTCTTGAACAATTGGGTGGATA CCTTTTCCCGTCTCGAACGATGACCGATTCTCCGCTAGCGTGACGGGTGT ATAGCCTAGCCTCATCACAAGCAAAGCTATCATGCATGGCTTTGTTGGTA CGTCCCTCTCCGCCTTGAGGTGGACATCATTGTTGACCACAGTGGCTCCC CAATCTAGCCGTGTGTTCGGTGCTGTCCGCCGTATAGGCAACTGGGACTT GAGGAAAATGCTGCCGAGCCAGTGTGAGCTGATAGGCGTCGACGTGCCTG AGCACTTCAAGACTTGGGCGAACATCAAGGACGTCTTCTGGGTGCGCACG AGATTCCCGAATCGCCGGGGTTTGTGTTTTCCGGCGCCTTGTGGAAGAAA ACCCAAGATCTTTTTTTCAGTCCCTTAGTTAGCTCTAGCCCAACACATCA AGTTGCGAGTGATGGAAACGATTACGGGGTACAAAAGTGGCGGCATCAAA ACACTCCTTACTGGAGACAGACTCCCGGACACCATTAGATGGAATAGATT CTGCTTCAGGTGTTAACAGCCCGAGTTCTGCCAGCCAATCATCTCGTAAG AGGTTTTGTATAAATAAGTTTTGCCATCCCGTAAAGGGGCTGTTTAACTA CCAGCCTCTCCCTTCCACTCGGGGACGGATCCGTCTGCCCAGAGCGTGGA AAAGGAAACGTAGCCTACTCCCCATGAGCCCCGATAACGTTGAGATACGT TTAAACACAATCAATCGCAATCATCGCCGAACTTTGCACCAGGAAGTCGC GCTCTCCAGGTCGCCAAACTGGTGGGGGGGCAAACGGCGTCAAACGTGCA AAATGCCGGCCATGCTGTCTGCCCTGCGACTGACGGTTGAGTGGCGACAA GACAGCGGGCGGGACGACTGCAAGAACTCGGCCCGGATCGTGCAAGCGCT GTGTAGGCGTCTCGGGAGGTAA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1485:92176..101297+

>mRNA_F-serratus_M_contig1485.3333.1 ID=mRNA_F-serratus_M_contig1485.3333.1|Name=mRNA_F-serratus_M_contig1485.3333.1|organism=Fucus serratus male|type=CDS|length=2622bp|location=Sequence derived from alignment at F-serratus_M_contig1485:92176..101297+ (Fucus serratus male)
ATGTGGGCGTTGAGGCACGGAGCTGAGGAGCTACGCCTCAACATGCGCCC
AGACGCCTTCGTGCATCTCGACGAGCTGCTCGACAACCCGCGCTTTCGCG
GGGTATCCATTCAACAGGTCCAACACGTGATGTGGGCGTTGAGGCACGGA
GCTGAGGAGCTACGCCTCAACATGCGCCCAGACGCCTTCGTGCATCTCGA
CGAGCTGCTCGACAACCCGCGCTTTCGCGGGGTATCCATTCAACAGGTCC
AACACGTGGTTGCGGTGGACGAAAAGTATCGTTTCTCGATCATGCGCGAT
CGAGCGGAAGGCGGTGGTCTGCTCATCCGGGCGGACCAAGGTCATTCGAT
CGGGGGGGTCATCCTCGAGGAGCAGCTCCTGACCAGGGTCGATCGCGCCG
AGGACATCCCCATCTGCGTGCACGGGACATCTCTCGCCATCTGGCCCAGG
TTGCGGTGGACGAAAAGTATCGTTTCTCGATCATGCGCGATCGAGCGGAA
GGCGGTGGTCTGCTCATCCGGGCGGACCAAGGTCATTCGATCGGGGGGGT
CATCCTCGAGGAGCAGCTCCTGACCAGGGTCGATCGCGCCGAGGACATCC
CCATCTGCGTGCACGGGACATCTCTCGCCATCTGGCCCAGTATCCGGGCG
AATGGACTTCGCCGTATGAACCGCATGCACATCCATTTCGCGGCGGGTCT
GCCTAGAGCGAAGGGCATGGTCAGCGGCATCCGGCGGAAGTGTCGGTATC
CGGGCGAATGGACTTCGCCGTATGAACCGCATGCACATCCATTTCGCGGC
GGGTCTGCCTAGAGCGAAGGGCATGGTCAGCGGCATCCGGCGGAAGTGTC
GGGTTTTCATCTACGTCGACGTCGCCTTGGCCATGGCGAATGGGATCGTC
TTCTTCCGATCGCGCAACAACGTTTTCATCTACGTCGACGTCGCCTTGGC
CATGGCGAATGGGATCGTCTTCTTCCGATCGCGCAACAACAAATCAGCGC
CGCCCAAGACGTTGCAATGGAGGCGGGGGCAGGATCCTCGAGCAATAGAG
GCCGGCGTCGACAAATCAGCGCCGCCCAAGACGTTGCAATGGAGGCGGGG
GCAGGATCCTCGAGCAATAGAGGCCGGCGTCGACCCACGTGCGAAGACAG
TGCGATCGACCCAAGCCACGTGCGAAGACAGTGCGATCGACCCAAGAGAA
CGATAACAAATGCACTTTTATGCAACTCCGCGGAGGCAAGTTGTGCCGCA
CCTGTAGCAAGAACGATAACAAATGCACTTTTATGCAACTCCGCGGAGGC
AAGTTGTGCCGCACCTGTAGCATGTCACGCGGAAAGCATAACCGCCCTTC
GACCACTGGCGCTCGTGGTCGCGTTCATGTCACGCGGAAAGCATAACCGC
CCTTCGACCACTGGCGCTCGTGGTCGCGTTCACGTTGGCATTTTCCCGTC
TGCTCTCTCACTTTTCTCGCGATGGCCCATAAGCTTTGGACCGATGGAGA
TCATCGAGTTCCCCACGATCCTGATGGACGCCCGGTCTCTCCAAGTTCTC
GACGAGTTCCGCGCGTACGTTCGCCCAGTGCGGAACCCAATCCTCACCCC
ATTTTGTACCAGTCTCACCGGAATCCAGCAGTTGACGTTGGCATTTTCCC
GTCTGCTCTCTCACTTTTCTCGCGATGGCCCATAAGCTTTGGACCGATGG
AGATCATCGAGTTCCCCACGATCCTGATGGACGCCCGGTCTCTCCAAGTT
CTCGACGAGTTCCGCGCGTACGTTCGCCCAGTGCGGAACCCAATCCTCAC
CCCATTTTGTACCAGTCTCACCGGAATCCAGCAGTTGATCGACAGAGCCA
TTCTGTTCGAGGAAGCTCTGCAGAGGCACACTGAGTTCATGCGGAGGAAC
TCCTGCCTCCCCGGGCAGGAACGGTCTTGCCTTTTCCTCACGTGTGTCGA
CAGAGCCATTCTGTTCGAGGAAGCTCTGCAGAGGCACACTGAGTTCATGC
GGAGGAACTCCTGCCTCCCCGGGCAGGAACGGTCTTGCCTTTTCCTCACG
TGTGGCAACTGGGACTTGAGGAAAATGCTGCCGAGCCAGTGTGAGCTGAT
AGGCGTCGACGTGCCTGAGCACTTCAAGACTTGGGCGAACATCAAGGACG
TCTTCTGGGCAACTGGGACTTGAGGAAAATGCTGCCGAGCCAGTGTGAGC
TGATAGGCGTCGACGTGCCTGAGCACTTCAAGACTTGGGCGAACATCAAG
GACGTCTTCTGGGAAGTCGCGCTCTCCAGGTCGCCAAACTGGTGGGGGGG
CAAACGGCGTCAAACGTGCAAAATGCCGGCCATGCTGTCTGCCCTGCGAC
TGACGGTTGAGTGGCGACAAGACAGCGGGCGGGACGACTGCAAGAACTCG
GCCCGGATCGTGCAAGCGCTGTGTAGGCGTCTCGGGAGGTAAGAAGTCGC
GCTCTCCAGGTCGCCAAACTGGTGGGGGGGCAAACGGCGTCAAACGTGCA
AAATGCCGGCCATGCTGTCTGCCCTGCGACTGACGGTTGAGTGGCGACAA
GACAGCGGGCGGGACGACTGCAAGAACTCGGCCCGGATCGTGCAAGCGCT
GTGTAGGCGTCTCGGGAGGTAA
back to top