mRNA_F-serratus_M_contig1483.3331.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1483.3331.1
Unique NamemRNA_F-serratus_M_contig1483.3331.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1483.3331.1 vs. uniprot
Match: D7G615_ECTSI (Alternative oxidase isoform A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G615_ECTSI)

HSP 1 Score: 470 bits (1210), Expect = 1.190e-160
Identity = 232/321 (72.27%), Postives = 269/321 (83.80%), Query Frame = 1 
Query:  349 KSDIAANVKKDDMRPGDHTETHFRLTPTKHPLSLAPAQ-----------------QKGKEWAVPREIWTEAELNSIKVTHKEPEQAVDYVALGAVRFLRQTFDVLAGFKTGPVDEHKYLNRVIFLETVAGIPGMVAGALRHLHSLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFMVLISQGVMFNAFFLAYVISPKTCHRFVGYIEEEAVHTYTTLLNDLDANKLPLFSNLPAPSIAKAYWKLSENAMFRDLVLAVRADEANHRVVNHTFADMHKEFKQDAVNPFSIQAKVSEYAEPGGVTPPTTANIADG 1260
            K +I   ++++ +RPGD ++ HFR TPTKHPL +   +                 +KGKEW++P EIW+  E+NSIK THK+PE+AVD++AL  VR LR  FDVLAGFKTG +DEHKYLNRVIFLETVAGIPGMVAG LRHL SLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGP+FRF V+ISQGVM+NAFFL+Y+ISPK CHRFVGYIEEEAVHTYT LL D+DANKLPLFSNLPAP++AK+YWKL ++AMFRDLVLAVRADEANH VVNHTFADMH+EFKQDAVNPFSI A V++YA+  GVTPPT A+IA+G
Sbjct:   65 KKEIGKGLEEEKIRPGDRSQVHFRATPTKHPLGMGSPKNSSVSSEGGGRSSGGKGKKGKEWSMPHEIWSAEEVNSIKPTHKDPEEAVDHIALRGVRALRWFFDVLAGFKTGVIDEHKYLNRVIFLETVAGIPGMVAGTLRHLTSLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGPVFRFAVMISQGVMYNAFFLSYLISPKACHRFVGYIEEEAVHTYTVLLEDIDANKLPLFSNLPAPAMAKSYWKLGDDAMFRDLVLAVRADEANHCVVNHTFADMHQEFKQDAVNPFSIHASVTKYAD-AGVTPPTVADIANG 384
[Close]
BLAST of mRNA_F-serratus_M_contig1483.3331.1 vs. uniprot
Match: A0A6H5KXL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL8_9PHAE)

HSP 1 Score: 416 bits (1069), Expect = 3.280e-137
Identity = 210/310 (67.74%), Postives = 243/310 (78.39%), Query Frame = 1 
Query:  349 KSDIAANVKKDDMRPGDHTETHFRLTPTKHPLSLA-PAQQKG------KEWAVPREIWTEAELNSIKVTHKEPEQAVDYVALGAVRFLRQTFDVLAGFKTGPVDEHKY---------------------------LNRVIFLETVAGIPGMVAGALRHLHSLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFMVLISQGVMFNAFFLAYVISPKTCHRFVGYIEEEAVHTYTTLLNDLDANKLPLFSNLPAPSIAKAYWKLSENAMFRDLVLAVRADEANHRVVNHTFADMHKEFKQDAVN 1176
            K +I   ++++++RPGD ++ HFR TPTKHPL +  P    G      KEW++P  IW+  E+NSIK THK+PE+AVD++AL  VR LR  FDVLAGFKTG +DEHK                            LNRVIFLETVAGIPGMVAG LRHL SLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGP+FRF V+ISQGVM+NAFFL+Y+ISPK CHRFVGYIEEEAVHTYT LL D+DANKLPLFSNLPAP++AK+YWKL ++AMFRDLVLAVRADEANH VVNHTFADMH+EFK+DAV+
Sbjct:   65 KKEIGKGLEEEEIRPGDRSQVHFRATPTKHPLGMGLPKNSSGEKGKKEKEWSMPHGIWSAEEVNSIKPTHKDPEEAVDHIALRGVRALRWCFDVLAGFKTGVIDEHKCASTTVQLKFSSEFLRSRNPRVNPSRADLNRVIFLETVAGIPGMVAGTLRHLTSLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGPVFRFAVMISQGVMYNAFFLSYLISPKACHRFVGYIEEEAVHTYTVLLEDIDANKLPLFSNLPAPAMAKSYWKLGDDAMFRDLVLAVRADEANHCVVNHTFADMHQEFKEDAVS 374
[Close]
BLAST of mRNA_F-serratus_M_contig1483.3331.1 vs. uniprot
Match: A0A836CI40_9STRA (Alternative oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI40_9STRA)

HSP 1 Score: 344 bits (882), Expect = 6.230e-112
Identity = 162/244 (66.39%), Postives = 198/244 (81.15%), Query Frame = 1 
Query:  475 EWAVPREIWTEAELNSIKVTHKEPEQAVDYVALGAVRFLRQTFDVLAGFKTGPVDEHKYLNRVIFLETVAGIPGMVAGALRHLHSLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFMVLISQGVMFNAFFLAYVISPKTCHRFVGYIEEEAVHTYTTLLNDLDANKLPLFSNLPAPSIAKAYWKLSENAMFRDLVLAVRADEANHRVVNHTFADMHKEFKQDAVNPFSIQAKVSE 1206
            EW V   +W+  EL+ +KVTH++P    D +AL AVRF R TFD +AGFKTG + E KYLNRVIFLETVA IPGMVAG LRHL+SLR+M+RDHGWIHTLLEEAENERMHLLTFL +K+PGP+FR  V  +QG+++N FF  Y+++PK CHRFVGYIEEEAVHTYT+LL D+D  +LP+F NL  PSIA  YWKL  +A+FRDL+LA+R DEANHR+VNHTFAD+H EFK + VNPF +QA V++
Sbjct:   89 EWTVDS-VWSREELHGVKVTHRDPTDIADKIALKAVRFCRWTFDWVAGFKTGSITEDKYLNRVIFLETVAAIPGMVAGTLRHLNSLRKMKRDHGWIHTLLEEAENERMHLLTFLYMKKPGPVFRIAVTATQGLIWNLFFFTYLVNPKICHRFVGYIEEEAVHTYTSLLKDIDEGRLPMFENLGVPSIAVDYWKLPRDALFRDLILAIRCDEANHRLVNHTFADLHAEFKSEEVNPFDVQAAVAK 331
[Close]
BLAST of mRNA_F-serratus_M_contig1483.3331.1 vs. uniprot
Match: W7TTV4_9STRA (Alternative oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTV4_9STRA)

HSP 1 Score: 313 bits (801), Expect = 1.180e-99
Identity = 156/287 (54.36%), Postives = 207/287 (72.13%), Query Frame = 1 
Query:  376 KDDMRPGDHTETHFRLTPTKHPLSLAPAQQKGKEWAVP--REIWTEAELNSIKVTHKEPEQAVDYVALGAVRFLRQTFDVLAGFKTGPVDEHKYLNRVIFLETVAGIPGMVAGALRHLHSLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFMVLISQGVMFNAFFLAYVISPKTCHRFVGYIEEEAVHTYTTLLNDLDANKLPLFSNLPAPSIAKAYWKLSENAMFRDLVLAVRADEANHRVVNHTFADMHKEFKQDAVNPF----SIQAKVSEYAEP 1218
            K+++R G  +  HF+L+P +H L++     K K W  P    +WT+ E+ +++VTH  P      VA    + LR +FDVLAGFK     E  YLNR++FLETVAGIPGM AG +RHLHSLRRM+RDHGWIHTLLEEAENERMHLLTF++LK+PGP+FR  VL+ QGV FN FFL+Y+I+PK CHR VG+IEEEAV TYT ++ ++DA +LPLF+++  P IA +YWKL+ +A FRDL+LA+R DEA HR VNHTFA++    K++  NPF      +AK++   +P
Sbjct:   79 KEELRDGARSIIHFKLSPNRHALNVPKLDPKEKVWENPTHHSVWTKEEVENVEVTHLPPADWTSRVAYTIAQTLRFSFDVLAGFKFRKATEDMYLNRMVFLETVAGIPGMAAGMIRHLHSLRRMQRDHGWIHTLLEEAENERMHLLTFMRLKRPGPLFRAAVLVVQGVFFNVFFLSYLINPKICHRLVGHIEEEAVRTYTHIIEEMDAGQLPLFNHVIPPPIAVSYWKLAPDATFRDLLLAIRKDEATHREVNHTFANL----KENDDNPFLAEEEYRAKITTMGQP 361
[Close]
BLAST of mRNA_F-serratus_M_contig1483.3331.1 vs. uniprot
Match: F2U7V2_SALR5 (Alternative oxidase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U7V2_SALR5)

HSP 1 Score: 297 bits (761), Expect = 2.390e-94
Identity = 147/264 (55.68%), Postives = 191/264 (72.35%), Query Frame = 1 
Query:  397 DHTETHFRLTPTKHPLSLAPAQQKGKEWAVP--REIWTEAELNSIKVTHKEPEQAVDYVALGAVRFLRQTFDVLAGFKTGPVDEHKYLNRVIFLETVAGIPGMVAGALRHLHSLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFMVLISQGVMFNAFFLAYVISPKTCHRFVGYIEEEAVHTYTTLLNDLDANKLPLFSNLPAPSIAKAYWKLSENAMFRDLVLAVRADEANHRVVNHTFADMHKEFKQDAVNPF 1182
            D +  HFR +   HPL           W  P   ++W+E E+  +KVTH +P+   D VA   +R +R+ FD+ +G+  GP++EHK+L RVIFLETVAGIPGMVAG+LRHL SLR M+RDHGWIHTLLEEAENERMHLLTF++L++PG +FR MVL +QGV +N +FL Y+ SP+TCHRFVGY+EEEAV TYT  +  LD   +P ++N PAP IAK YW L+++A+ RD++LAVRADEANHR VNHT + +    K   VNP+
Sbjct:   56 DVSVQHFRRSNNPHPLFSKVDDHGNPVWVNPVDNKVWSEEEVKDVKVTHIDPKDRHDRVAYYLIRMIRRGFDIFSGYAFGPINEHKFLRRVIFLETVAGIPGMVAGSLRHLKSLRLMKRDHGWIHTLLEEAENERMHLLTFMQLREPGLLFRGMVLAAQGVFWNLYFLGYLASPRTCHRFVGYLEEEAVKTYTDAIKALDDGLMPTWTNKPAPDIAKTYWGLADDALMRDVLLAVRADEANHRDVNHTLSTL----KTTDVNPY 315
[Close]
BLAST of mRNA_F-serratus_M_contig1483.3331.1 vs. uniprot
Match: UPI00106B4194 (alternative oxidase, mitochondrial-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B4194)

HSP 1 Score: 294 bits (752), Expect = 1.550e-92
Identity = 151/284 (53.17%), Postives = 193/284 (67.96%), Query Frame = 1 
Query:  346 KKSDIAANVKKDDMRPGDHTETHFRLTPTKHPLSLAPAQ-----QKGKEWAVPREIWTEAELNSIKVTHKEPEQAVDYVALGAVRFLRQTFDVLAGFKTGPVDEHKYLNRVIFLETVAGIPGMVAGALRHLHSLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFMVLISQGVMFNAFFLAYVISPKTCHRFVGYIEEEAVHTYTTLLNDLDANKLPLFSNLPAPSIAKAYWKLSENAMFRDLVLAVRADEANHRVVNHTFADMHKEFKQDAVNPF 1182
            K S  ++NV      P     THF+    KHPL     +     +K K++ +P  IWTE + +S+ + HKEP   VD +A  AV+ LR  FD+++ +K G + E K+L R+I LETVAG+PGMV    RH HSLRRMRRDHGWIHTLLEEAENERMHL+T L+LKQPG IFR MVL+ QGV  N FF++Y++SP+ CHRFVGY+EEEAV TYT  L  +D+  L ++ N PAP IAK YW+L ++   RD++LA+RADEA+HR VNHT A MH     D  NPF
Sbjct:   71 KYSSSSSNVSNQQSTP-----THFKELTGKHPLPEVEEEKQIEREKAKDYILPHPIWTEEDTHSVLINHKEPNGKVDKLAYYAVQTLRVGFDIVSMYKIGQMTEDKWLTRIILLETVAGVPGMVGAMTRHFHSLRRMRRDHGWIHTLLEEAENERMHLMTALELKQPGLIFRGMVLLMQGVFVNMFFISYLLSPRFCHRFVGYLEEEAVKTYTYCLESIDSGALSVWENKPAPVIAKRYWRLKDDCTMRDVILAIRADEAHHRKVNHTLASMHL----DQQNPF 345
[Close]
BLAST of mRNA_F-serratus_M_contig1483.3331.1 vs. uniprot
Match: UPI001F046237 (alternative oxidase, mitochondrial-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F046237)

HSP 1 Score: 287 bits (735), Expect = 4.410e-90
Identity = 142/261 (54.41%), Postives = 188/261 (72.03%), Query Frame = 1 
Query:  412 HFRLTPTKHPLS----LAPAQQKGKEWAVPREIWTEAELNSIKVTHKEPEQAVDYVALGAVRFLRQTFDVLAGFKTGPVDEHKYLNRVIFLETVAGIPGMVAGALRHLHSLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFMVLISQGVMFNAFFLAYVISPKTCHRFVGYIEEEAVHTYTTLLNDLDANKLPLFSNLPAPSIAKAYWKLSENAMFRDLVLAVRADEANHRVVNHTFADMHKEFKQDAVNPF 1182
            HF+ +  +HPLS    +    +K K++ +P  IWT+ +L S+ +TH+EPE  VD +A   V+ LR +FD ++ +K G + E K+L R+I LETVAG+PGMV    RH HSLRRMRRDHGWIHTLLEEAENERMHL+T L+LK+P   FR MVL+ QGV  N FF++Y++SP+ CHRFVGY+EEEAV TYT  +  +D+  L +++  PAP IAK YW+L +N+  RD++LA+RADEA+HR VNHTFA MH     D  NPF
Sbjct:   82 HFKESIAEHPLSDVEKMKEIIRKSKDYVLPHPIWTDKDLQSVAITHEEPEGRVDKLAYFTVQALRLSFDGISMYKIGKMTESKWLTRIILLETVAGVPGMVGAMTRHFHSLRRMRRDHGWIHTLLEEAENERMHLMTALELKKPNIFFRGMVLMMQGVFVNMFFISYLLSPRFCHRFVGYLEEEAVRTYTHCIEMMDSGALDVWNTKPAPLIAKKYWRLKDNSTMRDVILAIRADEAHHRKVNHTFASMHL----DEQNPF 338
[Close]
BLAST of mRNA_F-serratus_M_contig1483.3331.1 vs. uniprot
Match: A0A3M6ULE2_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6ULE2_POCDA)

HSP 1 Score: 285 bits (730), Expect = 1.310e-89
Identity = 136/241 (56.43%), Postives = 186/241 (77.18%), Query Frame = 1 
Query:  466 KGKE-WAVPREIWTEAELNSIKVTHKEPEQAVDYVALGAVRFLRQTFDVLAGFKTGPVDEHKYLNRVIFLETVAGIPGMVAGALRHLHSLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFMVLISQGVMFNAFFLAYVISPKTCHRFVGYIEEEAVHTYTTLLNDLDANKLPLFSNLPAPSIAKAYWKLSENAMFRDLVLAVRADEANHRVVNHTFADMHKEFKQDAVNPFS 1185
            +G E + +P  IW+E E+N++++TH+E +  VD +A G V+FLR  FD+++ +K G + E+K+LNR+I LETVAG+PGM+A   RH  SLR++ RDHGWIHTLLEEAENERMHL+T L+LKQPG +FR ++L++QGV  N FF+AY++SP+ CHRFVGY+EEEAV TYT  L  +D   LP++S  PAPS+A  YW+L E+A+ RD++LA+RADEA+HRVVNHT + +H   K    NPFS
Sbjct:   83 RGNEIYRMPHPIWSEQEVNTVEITHQETKTKVDKIAYGCVQFLRIAFDIVSLYKVGKMTENKWLNRIIMLETVAGVPGMIAAMARHFDSLRKLTRDHGWIHTLLEEAENERMHLMTALELKQPGALFRGVILLAQGVFVNCFFVAYILSPRFCHRFVGYLEEEAVKTYTYCLKCIDDGTLPVWSTRPAPSLAINYWRLKEDAVMRDVILAIRADEAHHRVVNHTLSSIHLNEK----NPFS 319
[Close]
BLAST of mRNA_F-serratus_M_contig1483.3331.1 vs. uniprot
Match: A0A6U4U061_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4U061_HEMAN)

HSP 1 Score: 287 bits (734), Expect = 1.600e-89
Identity = 150/271 (55.35%), Postives = 181/271 (66.79%), Query Frame = 1 
Query:  361 AANVKKDDMRPGD--HTETHFRLTPTKHPLSLAPAQQKGKEW-------AVPREIWTEAELNSIKVTHKEPEQAVDYVALGAVRFLRQTFDVLAGFKTGPVDEHKYLNRVIFLETVAGIPGMVAGALRHLHSLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFMVLISQGVMFNAFFLAYVISPKTCHRFVGYIEEEAVHTYTTLLNDLDANKLPLFSNLPAPSIAKAYWKLSENAMFRDLVLAVRADEANHRVVNHTFADM 1146
            AA V K+  +P +  H   HFR TP +HPL +        E         VP  IWT  E+NS+  TH EP    D  AL  V+  R  FD  + ++ G + + K LNR IFLETVAG+PGM AG LRHL SLR M  DHGWIHTLLEEAENERMHLLTF++LKQP   FR  VLI+QGV  NAFF+AY+ISP  CHRFVGY+EEEAVHTY ++L+ +D  +L  F   PAP+IA  YW+++ +A  RDL LAVRADEANHR VNHTFA +
Sbjct:   79 AAEVGKNSGKPAEIKHDMVHFRATPNQHPLDIKKMSDSTPEEIAKYGHRGVPHPIWTTEEVNSVVQTHVEPSGYADKFALACVKSARWGFDTFSLYRFGKISKKKVLNRAIFLETVAGVPGMTAGMLRHLKSLRSMNHDHGWIHTLLEEAENERMHLLTFIQLKQPDLYFRTCVLIAQGVFMNAFFVAYLISPSFCHRFVGYLEEEAVHTYESILDHIDNGELKEFGREPAPTIAIDYWRMAPDATMRDLFLAVRADEANHRDVNHTFASL 349
[Close]
BLAST of mRNA_F-serratus_M_contig1483.3331.1 vs. uniprot
Match: A0A820HPX3_9BILA (Hypothetical protein n=5 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820HPX3_9BILA)

HSP 1 Score: 285 bits (729), Expect = 2.240e-89
Identity = 163/295 (55.25%), Postives = 195/295 (66.10%), Query Frame = 1 
Query:  382 DMRPGDHTETHFRLTPTKHPLSLAPAQQKGKE-WAVPREIWTEAELNSIKVTHKEPEQAVDYVALGAVRFLRQTFDVLAGF-------------------KTGPVDEHKYLNRVIFLETVAGIPGMVAGALRHLHSLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFMVLISQGVMFNAFFLAYVISPKTCHRFVGYIEEEAVHTYTTLLNDLDANKLPLFSNLPAPSIAKAYWKLSENAMFRDLVLAVRADEANHRVVNHTFADMHKEFKQDAVNPFSIQAKVSE 1206
            DM   D  E H    P    ++ A  Q K  E + +  EI+++ ELN IK+THK  E   D VA GAVR LR  FDV  G+                   KT  + EH++L R IFLETVAG+PGMV G  RH+ SLR MRRD+GWIHTLL EAENERMHLLTFL+L+QPG  FR +VLI QG  FNAFFL Y++SP+ CHRFVG++EEEAV TYT  + DLDA KLP +S L APSIAK YWKL ENAM RD++LA+RADEA HR VNH  AD+      DA NPF I+A+ +E
Sbjct:   43 DMAKMDSIEEH----PHMRIVARAIIQHKQPENYMMHHEIYSKKELNDIKITHKRFESWHDRVAYGAVRTLRFVFDVFTGYMHPSLPSKSDFKNEVQHSHKT--MTEHQWLRRFIFLETVAGVPGMVGGMSRHMKSLRTMRRDYGWIHTLLSEAENERMHLLTFLQLRQPGWFFRGIVLIGQGAFFNAFFLTYILSPRICHRFVGFLEEEAVITYTRCIEDLDAGKLPAWSALSAPSIAKNYWKLPENAMMRDVLLAIRADEATHREVNHKLADV----GPDAPNPFVIEARRTE 327
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1483.3331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G615_ECTSI1.190e-16072.27Alternative oxidase isoform A n=1 Tax=Ectocarpus s... [more]
A0A6H5KXL8_9PHAE3.280e-13767.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CI40_9STRA6.230e-11266.39Alternative oxidase n=1 Tax=Tribonema minus TaxID=... [more]
W7TTV4_9STRA1.180e-9954.36Alternative oxidase n=2 Tax=Monodopsidaceae TaxID=... [more]
F2U7V2_SALR52.390e-9455.68Alternative oxidase n=1 Tax=Salpingoeca rosetta (s... [more]
UPI00106B41941.550e-9253.17alternative oxidase, mitochondrial-like n=1 Tax=De... [more]
UPI001F0462374.410e-9054.41alternative oxidase, mitochondrial-like n=1 Tax=Xe... [more]
A0A3M6ULE2_POCDA1.310e-8956.43Uncharacterized protein n=1 Tax=Pocillopora damico... [more]
A0A6U4U061_HEMAN1.600e-8955.35Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A820HPX3_9BILA2.240e-8955.25Hypothetical protein n=5 Tax=Rotaria sp. Silwood2 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1483contigF-serratus_M_contig1483:5401..19066 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score477.2
Seed ortholog evalue7.4e-132
Seed eggNOG ortholog2880.D7G615
Preferred nameAOX2
Hectar predicted targeting categorymitochondrion
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0016020,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.alternative oxidase activity
EggNOG OGs28JWX@1,2QSB5@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1451
Cds size1218
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1483.3331.1prot_F-serratus_M_contig1483.3331.1Fucus serratus malepolypeptideF-serratus_M_contig1483 5524..18956 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929458.5345259-UTR-F-serratus_M_contig1483:5400..55231622929458.5345259-UTR-F-serratus_M_contig1483:5400..5523Fucus serratus maleUTRF-serratus_M_contig1483 5401..5523 +
1690962862.6017404-UTR-F-serratus_M_contig1483:5400..55231690962862.6017404-UTR-F-serratus_M_contig1483:5400..5523Fucus serratus maleUTRF-serratus_M_contig1483 5401..5523 +
1622929458.786223-UTR-F-serratus_M_contig1483:18956..190661622929458.786223-UTR-F-serratus_M_contig1483:18956..19066Fucus serratus maleUTRF-serratus_M_contig1483 18957..19066 +
1690962862.7227433-UTR-F-serratus_M_contig1483:18956..190661690962862.7227433-UTR-F-serratus_M_contig1483:18956..19066Fucus serratus maleUTRF-serratus_M_contig1483 18957..19066 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929458.5496364-CDS-F-serratus_M_contig1483:5523..58081622929458.5496364-CDS-F-serratus_M_contig1483:5523..5808Fucus serratus maleCDSF-serratus_M_contig1483 5524..5808 +
1690962862.6175344-CDS-F-serratus_M_contig1483:5523..58081690962862.6175344-CDS-F-serratus_M_contig1483:5523..5808Fucus serratus maleCDSF-serratus_M_contig1483 5524..5808 +
1622929458.6251967-CDS-F-serratus_M_contig1483:14012..141321622929458.6251967-CDS-F-serratus_M_contig1483:14012..14132Fucus serratus maleCDSF-serratus_M_contig1483 14013..14132 +
1690962862.6280255-CDS-F-serratus_M_contig1483:14012..141321690962862.6280255-CDS-F-serratus_M_contig1483:14012..14132Fucus serratus maleCDSF-serratus_M_contig1483 14013..14132 +
1622929458.6727235-CDS-F-serratus_M_contig1483:15132..152531622929458.6727235-CDS-F-serratus_M_contig1483:15132..15253Fucus serratus maleCDSF-serratus_M_contig1483 15133..15253 +
1690962862.6378677-CDS-F-serratus_M_contig1483:15132..152531690962862.6378677-CDS-F-serratus_M_contig1483:15132..15253Fucus serratus maleCDSF-serratus_M_contig1483 15133..15253 +
1622929458.6868203-CDS-F-serratus_M_contig1483:15698..157951622929458.6868203-CDS-F-serratus_M_contig1483:15698..15795Fucus serratus maleCDSF-serratus_M_contig1483 15699..15795 +
1690962862.652397-CDS-F-serratus_M_contig1483:15698..157951690962862.652397-CDS-F-serratus_M_contig1483:15698..15795Fucus serratus maleCDSF-serratus_M_contig1483 15699..15795 +
1622929458.7001972-CDS-F-serratus_M_contig1483:16410..166361622929458.7001972-CDS-F-serratus_M_contig1483:16410..16636Fucus serratus maleCDSF-serratus_M_contig1483 16411..16636 +
1690962862.6668513-CDS-F-serratus_M_contig1483:16410..166361690962862.6668513-CDS-F-serratus_M_contig1483:16410..16636Fucus serratus maleCDSF-serratus_M_contig1483 16411..16636 +
1622929458.7273414-CDS-F-serratus_M_contig1483:17454..175791622929458.7273414-CDS-F-serratus_M_contig1483:17454..17579Fucus serratus maleCDSF-serratus_M_contig1483 17455..17579 +
1690962862.6754909-CDS-F-serratus_M_contig1483:17454..175791690962862.6754909-CDS-F-serratus_M_contig1483:17454..17579Fucus serratus maleCDSF-serratus_M_contig1483 17455..17579 +
1622929458.7454846-CDS-F-serratus_M_contig1483:18256..183291622929458.7454846-CDS-F-serratus_M_contig1483:18256..18329Fucus serratus maleCDSF-serratus_M_contig1483 18257..18329 +
1690962862.696122-CDS-F-serratus_M_contig1483:18256..183291690962862.696122-CDS-F-serratus_M_contig1483:18256..18329Fucus serratus maleCDSF-serratus_M_contig1483 18257..18329 +
1622929458.7686307-CDS-F-serratus_M_contig1483:18785..189561622929458.7686307-CDS-F-serratus_M_contig1483:18785..18956Fucus serratus maleCDSF-serratus_M_contig1483 18786..18956 +
1690962862.7083085-CDS-F-serratus_M_contig1483:18785..189561690962862.7083085-CDS-F-serratus_M_contig1483:18785..18956Fucus serratus maleCDSF-serratus_M_contig1483 18786..18956 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1483.3331.1

>prot_F-serratus_M_contig1483.3331.1 ID=prot_F-serratus_M_contig1483.3331.1|Name=mRNA_F-serratus_M_contig1483.3331.1|organism=Fucus serratus male|type=polypeptide|length=406bp
MPMLRAMNAMTRLGVTRLAVTPTTSVLRPQYGAAIGVALLPALRNKNVST
ATAKTPEATKTCLAPAGRCIGCKKKKSDIAANVKKDDMRPGDHTETHFRL
TPTKHPLSLAPAQQKGKEWAVPREIWTEAELNSIKVTHKEPEQAVDYVAL
GAVRFLRQTFDVLAGFKTGPVDEHKYLNRVIFLETVAGIPGMVAGALRHL
HSLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFMVLISQGV
MFNAFFLAYVISPKTCHRFVGYIEEEAVHTYTTLLNDLDANKLPLFSNLP
APSIAKAYWKLSENAMFRDLVLAVRADEANHRVVNHTFADMHKEFKQDAV
NPFSIQAKVSEYAEPGGVTPPTTANIADGAIEPATSNKKEEENKGKASPC
SVNVS*
back to top

mRNA from alignment at F-serratus_M_contig1483:5401..19066+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1483.3331.1 ID=mRNA_F-serratus_M_contig1483.3331.1|Name=mRNA_F-serratus_M_contig1483.3331.1|organism=Fucus serratus male|type=mRNA|length=13666bp|location=Sequence derived from alignment at F-serratus_M_contig1483:5401..19066+ (Fucus serratus male)
TTGTACGAATAACATACCACAGCACCCTTTAGCACAGCACCCTATAGCAC
AGCATCAATCAGTCCTCATTTCGTACAGGAAGAAGTTTCAAGACACTTCA
TCGACCACCACAACAAGTCGACGATGCCCATGCTACGAGCAATGAACGCG
ATGACTCGTCTTGGCGTTACGCGGTTGGCAGTGACACCGACGACCAGCGT
ACTACGCCCCCAGTACGGTGCTGCTATCGGCGTCGCGCTGCTGCCTGCTC
TCCGCAATAAAAATGTCTCGACGGCGACGGCGAAGACGCCGGAGGCAACG
AAGACGTGCTTGGCTCCGGCGGGGCGCTGCATCGGCTGCAAGAAGAAGAA
GAGCGACATCGCGGCAAACGTGAAAAAAGACGATATGCGACCTGGTGATC
ACACTGAAGTGAGTATCAGGGTTGCCGCACGACACTACCGTGGCCAAAGT
ATTACTGTATCTATCTATCTATCTATATATTATATCGCATACATTCGTCG
GGACAGCAGCAGTTTTTTTCTTTGTACCGAAGTGTGTGTGTGTTTTCTTC
CCATCCATTCTGGACATCAAGTTCGTTGGACGTACCAGCCGGGGTCACAC
AGGAGGAAGGTCACACAGGATTTCTCATCCACCTTCCTTCTGCGGTGCGT
GCCTTAATTTTTATCGCGAGAAGGATTCAGCCATTCCTTTCCCTCGTCGA
CCGTGAAGTCGAATCTTGTGTACTAACGAATTAATCGTTCTCCACCCGTT
GGGCATTTTTATTTTGTTTTTTAGTTTTTAGTGAGAAAATTCCGTTTGCC
GGGATCGAACTCACGTCCCAACGTGTCAGAAGGTTGCGAGGTACACCTAC
TGAGCCACCGGGGCGACCGGTAGTGAAAAGTACTTTGTATTATTATTATT
GTGCTCTTAGGCCCGATCTTATGGATCAGAAAAAACGTTATCGAAAAAAA
AAAAACTGATAACGACCACAAAGTCGATCTTATGGATCAGAAAAACGTGT
TTTCGGATCACTTTTTTCGGAGGAAGCGCTTTCGGAGGAAAAGTTATCGA
AAAATCCGGAAAAAACGGAGGAAGATGTTATCAGAAAAAAGTTATCAGAA
AAATAGTTAGTAGCGATACGAAGGCGTCCCTCAGACGGATGGACGCAAAA
GTTCTAATATATGCCTTTAAACACAGAGCTCGTGTATCTTGGAGACAGAG
GCATGGATGACTGTGTTGCGGCGGTGACGACCTCGGGGGCAGAATATCCA
CACCGCAAGCTAAGAATCAAAAATACCAATCAGTTGGCACTCGTTCTGGG
GTTGCTCGCCGAGGAAGATACAATCGTGTCCCGAGAACAAATCTCTAGTT
TTTGCAACGTGCGTCGTGCAGCAGTTGACGTCCTCGGTACAGTACATATT
GCACAGCCGTACTGCACAGTCGTACTGTTTGCATGACACGTTGCGGCCTT
CGAGCTGCGTTCGTGTGGTTGTGCAAGGAAATGGTTAAAGATCACGTACT
GTACCACGCCACAGTAGGTGCACAATATAATGTGCCTATCCGCAGGAGCA
GTCCTTCGCTATGTGAAGTGGGCGAAGGCGTGCCGGACGGACGGACGCAA
AAAAAGTTCAAATCTGCCTTCAAACACAGACCTCGTGTAGGTTGGAGACA
GGCATGGGTGACTGTGACGCAGCGGTGACGGTCGCAATGGCAGCATGTCG
ACGCTGCAAGCAGAGAATAAAAAATATCAATCAGTTGGCACTCGTTCTAG
GGCTGCTCCACGTGGAAGATGCAATCGAGTCCCGAGAACACATCTTCTAT
CTGTAGCCTTTGCAACGTGCGTCGTATACAGCAGTCACGTCCTCGGTGCA
GATTATATGTTTATAGAAAAACTAGAACACGCCTAGACCTTCTGAGATAT
TGCACGGACAGATCTGTTTGCATTGTACGTTGCGGCCTTAGAGCTTCATT
CGTGTGGTTGTGTAAGTCCGAAACGATCGAAGACCACCTGCTGTACCACG
CAACGGTTGTAAGAAGGTGCACAAGCAAGGCAATGAGCCTGCTCGCAGCA
GTCCTTCGCGACTTTTGCTGTGGGTGACAGCATTATCTAAAACATACAGC
AGACTGTGTACCAGGTTATACATTATGAACAGAATCTCCAGTAGAGTACA
ACTTGCAGTCGCCGAGATTCATCGGCTTTGAAAAGCTACTTACAACCGTG
GCGTGGCACAGGACATGATCTTCAATCGTGGGGAGCTTACACAACCACAC
GAATACAGCTGGCCGCGGCCGCACCGTACCATGCAAACATACCAGTACGG
AAGAGCATTCGACACAAAAAAAAAAATAGGACCGTAGTCCCAGGTCCTAC
ATCAGGACTGTCAGAATCAATATTTTCCGATAATGTTTTTTTCTGTCCCA
TAAATCACGTCGCATCGGTGTTCTCATCAGAAATTTTCTTGTCAGAAAAA
AAAGTTTTTCGATAACGTTTTTTCTGATCCATAAGATCGGGCCTTACACT
ATTATTAATCAAATAATAGGGTGTAGTGTAGTATTAAGATTAATATCAGG
CCAAAGGCACACACATTTTTTTATACTATTAATACAGATTTCGGAAATAA
AAATGGTGATCATTTACAGTACAGTAGAGAGTATGCATCCAACCGGTGAA
GGCAATACTGTAATAATCAACGCGGAGACTCGGAGACCCGGAGACGGAGC
GATTGCTCCGCACTACAAGCACTTACTGCTTTTGCTTTACTTACTACATC
GGCCTACTTTTTGTCATATTTTATGTGATCAGCAGAACGGCGACCTTGTT
CCCTGCCCGAGAGCACCGATCATTTGAATTGAGAACTCAAGGTTGGTTGT
ACGCGAGATTTTCCACCATCATACATATATGAGTTACTTTTCATGGCTAT
TCTTTTGGAGGGTTCAGCCACAATAAAATAAAATAAAGCACTGGAGTAGT
GTACAGAGTTAGTACTACGCGTACTGCACCCAGTAACTATTGATACTTCT
GTGTAACCCACTGATAGTTGATAGTGCGGAGTTTATGCTGTAAAAAAAAC
AAAAAACTTCTTGTTGTTTTCACACGTCTTCCAGCGATTTGTCCTTGCAA
CTGAAGAAACTACACAGTGACACAAGTCAGCCATAGACCTATCAAAGGCC
AATTCCGCTTGTGGTCACAAAGAGGTACCAAGGTCAACGGGTCACCCGTC
TCGCGAGACCAAATTCTCAGGCACGAGCGAACGCGGACAGGGGAATATTT
TTTTCACTTTTTTCACTTTTTTCACTTTTTTCACTTTTTTTTTTCTTCCT
TGTTGCCGTTGTTTCTAAGTGTTTCTTCACAGCGACTGGTTTATTATTTC
GCTTTTTTTGCCTCTGAGCTTCCCTCCTGAATCCCTACCTGGCGATGATG
TCCTCAGCAGGCTACTTTTACGCCCGTTTCCTTCTGCCTGCTTTCTTCCT
TGTTTGTTTATCTTGTTTTTCGTTCACGATATGCTTTGGTGTAACTTCCT
CTATCTTGTGACCACAGCTGGACTCCTGGCAGACCAGTTAATAATGTGAG
ATAAACAACAACGTGTTCGATTGTGTGTTAGTTTGGTGTTTTGTTTGCTT
TTCATTTGTCTCCTCCCTGCGATATAGGTGAGCCCGGTATGGGTTCTGCT
CCTCTTTCATTTTTGGGCAGGTAACCCATCGCGATGCAGGCTGTATACCT
CATCATTTTATTTCAATTGATTTATGTCTCCTCTTCCTCCATCTCTGTCT
CTATTTCGCTGCGTGTCGCATTCGCTGCCCTTGCCTTTTCATGCTTGGGT
TGTATTCCGCCGCTTTTCAGGGCTGTTTTTTTCTTGCGTAGCCTTTTGAG
GAGCTTTTATGTTTTATGTTTTATGTTGTTGCCCCTAGGTTGTTCCTACT
CTCTGTGATTTTGTTTGTGTTTCCTATTTTCTTACTTATAGCGACAATGT
CCTTGCTGGCTACTTTCTTGTCCGTTGTCTTCTATATATTTGATTTTTCT
TCCCTGCTTATCTCGGAAGGTATTACAGGTTTTTGATCTGGTTTTGTTCC
GTCTATCTTGTGACCACGGCTGGATTCGTAGCGGATCAGTTAATGTGAGA
TAAACAACAAACAACAACAACAACTGTTCAGCTGACCACGAGCAGGGTTG
GCAACTTTATCCGGTTGATCCATACTTCTTGATATATGTGTGACTATACA
TACATACATACATCATGGTAGTAGCAAACCGCTGCTCAAGCCAGCAACAG
GGATCCAAATCGCGACAAAATCATTGCCAGGTCCAACCAACCGAGAACAT
CGGAAAATACAAGACTAATATAATAGTAGGAGAAGTGAATTTTAAACGAA
AGCAAGTGTATACCGAGATAAATATGCTTGAGAAGCCCATTTTCCCGGAA
AAGTATAACTCCGGAGTATAATATGTATGTGTGTGTGTGTGTATTTATTA
AATTGCACATAACCACGCAATCCGGCCCTGTCATCCTAGTCATTCTATGC
CACTCGCATTGATCCTCCCGAGGGGGGATCAATGTGTGTGTGTGTGTTTT
TTTTTCTTCCCATTTATTCTAGATAATATCAAGTTCGTTGGACATACCAG
CCGGGGTCACACAGGAGGAAGGTCATACATCATTATTTCTCATCCACCTT
CTTTCTCGCAAGAAGGATTCAGCCATTCCTTTCCCTCGTCGACCGTGAAG
TCGAATTTTGTGTACTAACGACCATTTAATCGTTCTCCACTTGTTGGGCA
TTTTATTTTTTATTTTTACAAGACAAGAGGGGATTCGCGTTTCTTTGAGA
AATGATGGTTTCTTACTTTCCCCCAATAATTTTTAGTTTACATACTGTAA
ACTATTAACAGTCTAATGGTATATACTACAAGTGCCCTTCTGTATCATCT
GCAAGTGAAATAAATTACTTAAATTATGTGCCACGAGTCAAGTACATAGA
TAGTCTAGTAGTGCAATATACTGCCTGGTAGGTACTATTAATACTGCAGA
ACGGTTTATAGCATGGTCCACAATTAAACTGTTATTATCCTGCTCCAAGA
GGTCGTCTATGTCTAGAGCTTCATGTATGATGAAGTTGAATATTTTCAGC
AAAGCAATACTACAAGCAGTAGTCAGCAACTGGTGTGTGGTTGTGTTTCT
ACATTGTTTTCCCCTGTCAGGTGGATGCTCTGAAGGTTATATTACAATAA
AATATTGCCGTTGTGTCTTCTACCGTTCAATGAAAAAAATGAGCGCATAT
CAACCATCTGGGCATTCCCTGGACAGGCGGCGGATCTAAGGTTTGGAGCA
TATTTCCCGACCACTGGACTGCGCCAGAGGGAGGAACCTTCTCGAAGGAA
ACTACCGTGCCATATTCACTCGCAACCACCCTCGAAAGCAGGAGCCTCTG
TTCATAAGTTCTCTTTTTACAAGTGACCGCCCCACTGTCGTCGCATATTT
CGCATCAGTATCATCGCTCTTAGCTCCAGCCCTCGAAACCATGACTACGT
GCCCTAAAAGCCACAAACAAGTCAACACGAGACTCAGGACTGGTCCCACT
TTCTCTACAGCACACACATCCAGCCAGAGTTGTAAGCATCACAAAAAAGT
GGTCTTGGTGAGAAATGTGTCCAATTTCCCAGCAAGCAAAAATGCGAAAA
AGGAGGACTTCGGATAGGAGCAAGGAGCATTACTCGTCATCCTTGGAGAG
TGTGGAACCATAAAAAACATGTTCCTCCCCTGACCTGTAGTATGATTATA
TACGTTCATTGAGCCCATGAGTCTATGGGATATCAAAACAGCACCTCCTC
TACTATATTTTACCCGCAAGGTCTCTCTCTCCCTCTCCATACACTTGCAC
CGTGTGCCTGAGACCACTGGATATATACTGGATATCTATAGAGCTTCTCC
TCGTTCGGGACGGTACCAGTCCGAACTTTTTGCAGACGTAAGAAATCCTG
CGGTCATTCAGTTCTGAACGCACCGTTTAGACCTTCTAGATGTCAAAGAG
CATCCCACACAGGGGAGAAAATGTCAAAACGTTTGGGTGGGATCATACTT
GTAGGCTACAAGGACAACACCTCTTGATGGCAAATTTGAACGGGTTATTA
AGTTATTGAACATTGCACCCAAGCCAAGGAGAAAGGAGCGGACGGAGGAA
ATACTCCGTGGTTGCATGACCTTGCCAGCGCACAAAAATAATATGGTAGA
TTTTCCCTGTGGAACCAAGATCCATTTTTTCATATTCAAATTATGAATAA
GATCTTACCCGGTTGTACGTTATAGTCACTGCACCAGGAACCGACACAAA
AATGAGGATGGCGAGATTATTAGGGTAGGGAACAGCGGTCAGGAACCGAT
GCACGCCAACCAACGAAGAGAGAAACCTGAGATAATTTTAGCAGTCCCCG
TCCAACGTATTGAGATGATAGGGGTGGCAACAGAGAGTGCGGTCGACGCA
CAGACTCGTAAGGTCAGCTACACATTCTGCCAGACTCCACTTGACTTGAG
CTATCCTTTTCCCCCTCCGCTCAGCAGACTACCGGCGGGATCGGCCATTA
TCGTGTACTACAATAGTAGATTCCTCGGGTTGGCAAAATAATACGCTGAA
TGGAAGAAATAAATAAACAACAACAACGTAACCAACGACAGACAATCGCA
CATGGAGGCAAACGTTTCAAAGGTGGAAGACCACGGCCAGAGACTAACAC
CAATAACATGCACGCCTTGAACATAACATGGGTTCGCCCTTTCATTGTCG
TCTCTTCGAGCCCAAACCCCCCTCCAAGCCCTCCCCCGCGCCACCCATCA
GTACCAAGTCCATCTGGGTTACTCTCGTTAGCATGACCAACCTCTACCCT
TTCTCCAAGCCTCGTTTGCAGCGCCAACTTGTTCCGGGGCAGCCGCCGTG
ACTCAGTCTGCGCAGTGTACGACGCGGGAATATCCAGCAGGAACCTTATT
TTCCCTCCATCCTTTCGCGCGATGTGCCCCCCATTACCCCCCCAAATGCG
TATTATACCGTCAGCTGATCTGCCACTTCAAGGCTTTCATTCGCGAGGGT
CCGCAATATATATACTACCCGGTAGTAGGTTTTGAAGCTGCTCTCGTCGT
AGGATGCGCACTTTCATGCCTGAGCTGTAGCGCTGGCGGCGTAGTCATTA
GCAGCAGCAGAACTGCCCGCACTTAGGTTGACTCCAGCTTGGGGTTCCAT
ATCTTACTCATCAACGTTTTAGTTATCCTCTTGTGGCGTTATCCACCTTC
TTAGACGCTTGTCGGTGTCGGAGGCCACACGCTTGGGCAACATGTTCTCG
CGCAGGTTGCGATCGCCTCAAGACATGAGATCCCCCCCCCCCCCCCCAAA
TAAAATAATTGTACTTACATGAAGTGCAACACGCAGTCCGGCACTATAAC
ATGTATTAAACAGAAGTAACGTCAAAACAATGCGCCAGTAAGAAGGTGCG
CAATATATATTACATACTATATACTATATATTATATGGTATGCGTGATTA
CTGTTTGGAACGTTCATCGTATCATGAAAGAAAAAACACACAGACAAACG
CCATGTTGTGACGGCATGAATCCGCCACAAACGACCTAGACTGGTATTTC
AGAAGTGCATGCATCAAAGCGCATGGGTGGGCAAAACAACGAAATATGTT
GAATCACCCATTAAAAAAACGTCTCTCGCTCGTTTTTTCAACCAGCGTGG
CGTCAGAGATTGtTTTTTAAAACCACCGTATCAGAATTAGAGCCTACGTG
TATAATACTAACTGTACAATGTTTTTTTTTCGTGTCTCTGCATGGTGATT
AATGTAAGTGTACGGTGTAACCGTGGGCTTCTCCCCGACATTATACTGTT
GACCCAATGTTACTACCAACAGGAAACCCGTTTAAATGCCATGAAGAGTT
TTTTTGCTTTTGCAGCCTATGATTCCACCTAAGCTTTTTGACATTTTTAC
CCCTGACTGTGGGATGCTCAGAAAGTCTAGATTCTAGATTGCGTGCAGAT
TTTTCTTTAAATGCCCCCAGAATTCAGCTAAACACAGAGGGTGGGTTGGG
AATTGGCCAAGTAACTATTATAATAATGCACACTGTGATTAAATAATAAT
CACAACAGCCAACCATTCGGTTGTTGTATCATCACAAATATCTTCATCAC
GAGTGCATGCTCTAAGGAACAACCGCGCAAGAACAATCCACCACGCAACA
ACAATCCGGTTGTTTGTGTATCATCACAAATGTCTTGATCTTGATCACGT
AAGTAAGCGCAACAATAATCCACCACGCAACAACAATCCGGTTGTTGGTG
TATCATCAAAAGTATTGTCTTGATCACGAGTAAGTGTACTAATAACCTTC
ACAACAACAGTGTGGTTTGCGTATCATCACAAATGTCTTGATCACGAGTG
CATACTGTAAGGAATAACCGCGCAACAACAATCCACCACGCAACAACAAT
CCGGTTGTTGGTGTATCATCAAAAGTATTGTCTTGATCACGAGTAAGTGT
ATTAATAACCTTCACAACAACAGTGTGGTTTGTGTATGATCACAAATGTC
TTGATCACGAGAGAGAGTGTAAGGTAACCAGCAGTCCTATCGTGGTTTAT
ATCTCCTTCCAGACGCACTTCCGCTTGACGCCCACCAAGCACCCGTTGAG
CTTGGCACCGGCGCAGCAGAAGGGTAAGGAGTGGGCAGTACCCCGTGAGA
TCTGGACGGAGGCAGAATTGAACAGCATCAAGGTGAGAAAAATAAACCAA
GTCTTTCGATAAAAAGTACATCCCGGGGGGCTTTACATGCTGTACAACTG
TACTTAGATAACAAGTTTTTGAGAGGAGCAAGATTTTTACTCCGTACCGT
AGGGTAGCACCACTTATGATTGCGATGTTTGGCTCGTTTCGTACGAGCAG
AGTTCACAGAGAGACATGGCCGGATGTGGTTTACAGAGGAATGAACTCGC
TTCCATCATTCAGGTTGAGCGACCCTGGCCCTATAAAAACTATACCGTCT
ATACCATCCATACCGTCTATACCGTCTATACCATCTATACCATCTATACG
ATCTATACTATATGTACCATCTATACTATATATACAATCTATACCATCTA
TATCATCCCCAGAAAACACGGAGGGGAGTTAGTTGGTTTGTTGACGTGTC
ATCTATAGTGCTGAGGGGTAGCATGATCATGACGCGGAGAGTATTGTGGA
ACCCAGTGGTATATGGATAAGTATTATGCATGCGCCTGCTCGGGCCTTTG
TTGTTAGAGGAGAGAGGGCGGGACGAGGATATGACGAGGATAGTAATATG
GCCTATCTGTCGAACTAAGAATTATGAAATTTAGGATCCAGTAAAACTCT
CTGTGTTTTAACTGCTGAGTCTTACGGTTCGCAAACAAAGGGTTTTGCCA
CTGGCTCGTGCTAAGCTAAAGTGCGTTTGTATCTGACGCGGCCCCATGTC
TGGAAGTGCGTTTGTATCTGATGCGGCCCCATGTTTGGAAAAGCGCGGGC
ATCTGCTCTTTCAGACTCAAAGTGCTGGAAAGGAGGTTAAGGTCTGCTAC
CACTGCAGTGTAGATATCGCACACACGCCAGCGAAGATGTGCTGTTAAGC
GCATCGCGCGCTGGGTTAACCGAAAACCGTGGCCTTTGTCCTAAAAACGT
TCTCATTTCCCAATAACCGCTCAGGGTAAAAAATGATGATAAGAATTAAG
ACCACGCCCCCGTGGTGTCGTGTCCACGACAGGTGACGCATAAGGAACCC
GAGCAAGCGGTCGACTACGTGGCCCTTGGCGCCGTGCGCTTCTTGCGGCA
AACGTTCGATGTTCTCGCGGGCTTCAAGACCGGCCCCGTCGATGAGCACA
AATGTGAGCCTCCATTCTATGTTTTCCGTCCATTCAAGCAAGTACGTCGT
CTACTACACGGTATACACACACACGCACGAGTGAGCGCACATTGACGCGT
ACATGTACGCACGCACGCACGCAGGCGCGCGCGCGTTGCTGAACGTAATA
ATAAAGAAGACTGATATTTCTAGGGGCCCGCCGTATAGCTCTACGCGTGC
TCTAGAAACATGCTGAACCCTACACAGGCAAAAGCACTTGTCGTTTTTTT
CTAATGGGAAAGAAACCACCATCCTTGGGGTATACTTATCTTTAGACGCG
TTCCGATCACGACCAAAATAAAACGAACACATCCTGTTACCTTCCTTcCC
CCCCGACAAAGACGTCTCCTCCCTCCTCCACCCTCCTCCCTCCTTACGTT
CGCGTCATTCTTTGATCGCCACCGTTGATGTGCCCCCATTTCCAAAAGAT
CTGAACCGCGTTATCTTCTTGGAAACCGTGGCGGGTATCCCCGGCATGGT
GGCGGGAGCGCTGAGGCACCTTCACTCGCTCCGCCGCATGCGCAGGTGCG
CATCATTATGCCGTCATCGGTTACACTCATGTTCCTCATGGGGTAGTGTT
CTCTTGTTTATACAGAGAACAACTGATTTGTTGAATTCGTGCCGACGCGG
GCCGCCATATCTGAGTTTTGCATAGTCATCCCCGTCTAACATAAAACTTG
GTCCTTTAGACGAACTGTGCCACCTGTAAAAATGCTCTAGCTGTGTGCGA
CGACGAACAATTTTGCTGAAAAAAGGATCACTCCATCTACCAGACCGTGA
CAAGACACGTGGGGATTATCTCTCTCCCACCCCCCCTCCCCCCTCACCAG
CGCTTCCCTGCTCGACCATCGAATCGCTCTGAAACCCAACCCTGCGTATA
AGATCGTAGCATGCTCCACGTTTTCCTTTTCATCAAGCAGCGGAGACCAT
GCTTTGCCTCTCGCGCACTCTCCATCTCGTCATCTCCTGACCCCTCTCCA
TCCCGTGTCCGAATCTTCCACCACGACCACCTTTCTGTCCCCTCTTCTTG
CATATCTCCTGTTTATATCCCCATTGATGAAACCCCCTCCAAATAACGTG
ATCCCCCCCCCCCCCCCGCGCTTCCGAAATAAAATACAAATGAAAATGAA
AAAATGGTAGGGATCACGGTTGGATCCACACCCTGCTGGAGGAGGCGGAG
AACGAGCGGATGCACCTTCTAACATTCCTGAAGCTGAAGCAGCCGGGCCC
TATCTTCCGCTTCATGGTGCTCATCAGCCAGGGCGTGATGTTCAACGCTT
TCTTCCTCGCGTACGTCATCAGCCCCAAGACTTGCCACCGTTTCGTGGGC
TACATCGAGGAGGAGGCCGTCCATACCTACACCACGGTGCGGGAGCTGCG
TCATTTCCAGTCAGGAGTTGTAGTTTTCTGCGATTCATTTCGTCTTACGT
TCAACTTGGTCCATTCTCGGTGTTTCTCACCAGCTACGCGTACAGCAAAT
AAGCGGCCGACGCTACATGATTGGCAAAACCCCCAGAGTTAGCTGTAGCT
TGCGGCGTCGTACTTATGTTTGGTGTGCTGTCTTACAATTATGGATGATT
TCCTCTCCTGGGATGTGTTTAGGCTTTCCATCCCTTAGGTGCGGAGGTTT
TCATTCCATCGGGTGGGGGACTTCCATACCCGAGGTGTGAAAATTTTCCT
TTCCGTGGTGTGAAGGAGTTCCATCTCGGATGTGAAATATTCCCATACTC
GTGCGTGGATATTTTGTCCCCGGGGTGCGAAGAGTTCAATCCCCGAGGTA
TGAAATATCTCCATCTCCGGGCGGTAGAGGGTTCTCGTCCGGGGGCCTTG
AAGGATTTTGATCCACGTATGTAGTGGGTGATTTTTACACTCGGGATGTG
GAGCGGCGAGGCCAACATGCATTCGGGACTGGCACGAGTGCAGCTTTTCG
GTAGCACTTAACTGGCGAGCAGCTAGATCATTTAATTCTTTCTGCATTCC
CCCCGCACGCCATTTAGCGGCTGTAGTACAAGTCCGTCCTCCTCTAACTC
TTGACGTTTGTGTAATTTTCGATGAGGTAACGCCACCCCAGTTACCCTAG
AGTACGATCAAGTACACCACTTCTTTAACGAGCTCGTGAAAAATATATGT
GCGATGAACTCCCCCCCCCCCTCCACTTATTTCTCAAACTCGCACTCAAC
CCAGTTGTTGAATGACCTCGACGCGAACAAGCTTCCACTTTTCAGCAACT
TGCCGGCCCCTTCAATCGCCAAGGCCTATTGGAAGCTCTCCGAGAACGCT
ATGTTCCGCGATCTCGTCCTCGCCGTCAGGTGGGCAGGTTTCAAGACGCG
TTTTGTTCTGTTTTTATATATGTCCTTATCGATCTTGGAGTGACCGACTT
TTAGTTTGGTAGGTACGTTGAGGGTGGTTGCGTCGTTGGAGGCGGGAGCC
AGATGGTCAAGTACAAATCAACCACAACTAAGAAAGCCACGCTTTGCTTG
GGGAGGGATACGCTGCGCACCCACGCTTCTTTTCGCTGGCGTTTCCCTCG
CGTGTGCGCCAAGTGCCAAACGGCGTATGTGGGCGAAGCGGGGACTAACA
CACCCCGCAGAGTCACCCTGCTCTCTTGAGAAGCCGTTGTATTTTGACGG
GTTCAACGATTGGGGGCGGGGCGGGGGGGGGTGTGTAACATTTTGTCCCC
ATTTTGGGAGGGAACGGCACGAAAATAACCCCTACCGGGGACATATTTGA
CCAGCCCTCTGGTCAAATGCGATGAATTCGAGGCAAGCTTGCCGACCATC
TAGGGGATCATGTAGTCTCCTCCCCGGAAGGGGCTGCTTTGGCAACCTCC
CGGGGACGAAATTGTCGTATCCCCGCTCTCCCCAATCGTTGAACTCCTCT
TTTCTTTTGCGCCGAAGGCCCCAACAAAGGCCCCAACAAAAGCTGCATCG
GTCAGATTACGCGCACTATGTGGTGTCTGTTGCCTCTGTTGCCACACTGT
TCTCAGGGCCGACGAGGCCAACCACCGTGTGGTCAACCACACCTTCGCGG
ACATGCACAAGGAATTCAAGCAGGATGCGGTGAGAGGCTCCACTCTGTCT
GGGGTTTTCCCTGCGATCCTCACGGCCACATATCAGTAAAATACTTTTCC
TATATTATTTCGCTTCGTAGTCTCACCCAAAAGTCCTATAATGAGAGTAA
CACTTAGGGGGAGAGCAGCGGACCGCCTTTGTTCGGGGCTGCTGTACGTG
TTGGGTCTTGCTTGTGTACCAGCGCTCGCGCTGGGCTCATGTATAGATAA
ATCAAACACTGCGCATGGGTGTGGATATCATCGAGGCACGTTCATTTTTG
CATCGTACTGGCAATGTAAAGGCCACCTTTCTTTTGAAGCAGGTAAGCAA
TATGGAGCAATCTTTCTTCGCCGAGCGTCGTGCGCAACAATTTCCCTTCC
CAGCCCTGACCATACAGCGCTTTGCAGGCATGTATATAGATCGCTATATA
TTGATGAACTGTAACTAACTGTGCTTCCCACCCAGGTGAACCCGTTTAGC
ATCCAGGCGAAGGTCTCCGAGTACGCCGAACCGGGAGGCGTTACTCCGCC
GACCACGGCGAACATCGCCGACGGCGCTATCGAGCCCGCTACCTCCAACA
AGAAAGAAGAGGAGAATAAGGGAAAAGCCTCGCCTTGTAGTGTAAATGTC
TCGTAGTGCCATCCTGAAAGGCAGAGGACGCTGCGATTAACACCGTGGGG
TAAGAAAAAACAGAAAGTCACACAAACTGCCTCACTCGAGCGAGGTCGGC
GTTCTACGAGGAAAAA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1483:5401..19066+

>mRNA_F-serratus_M_contig1483.3331.1 ID=mRNA_F-serratus_M_contig1483.3331.1|Name=mRNA_F-serratus_M_contig1483.3331.1|organism=Fucus serratus male|type=CDS|length=2436bp|location=Sequence derived from alignment at F-serratus_M_contig1483:5401..19066+ (Fucus serratus male)
ATGCCCATGCTACGAGCAATGAACGCGATGACTCGTCTTGGCGTTACGCG
GTTGGCAGTGACACCGACGACCAGCGTACTACGCCCCCAGTACGGTGCTG
CTATCGGCGTCGCGCTGCTGCCTGCTCTCCGCAATAAAAATGTCTCGACG
GCGACGGCGAAGACGCCGGAGGCAACGAAGACGTGCTTGGCTCCGGCGGG
GCGCTGCATCGGCTGCAAGAAGAAGAAGAGCGACATCGCGGCAAACGTGA
AAAAAGACGATATGCGACCTGGTGATCACACTGAAATGCCCATGCTACGA
GCAATGAACGCGATGACTCGTCTTGGCGTTACGCGGTTGGCAGTGACACC
GACGACCAGCGTACTACGCCCCCAGTACGGTGCTGCTATCGGCGTCGCGC
TGCTGCCTGCTCTCCGCAATAAAAATGTCTCGACGGCGACGGCGAAGACG
CCGGAGGCAACGAAGACGTGCTTGGCTCCGGCGGGGCGCTGCATCGGCTG
CAAGAAGAAGAAGAGCGACATCGCGGCAAACGTGAAAAAAGACGATATGC
GACCTGGTGATCACACTGAAACGCACTTCCGCTTGACGCCCACCAAGCAC
CCGTTGAGCTTGGCACCGGCGCAGCAGAAGGGTAAGGAGTGGGCAGTACC
CCGTGAGATCTGGACGGAGGCAGAATTGAACAGCATCAAGACGCACTTCC
GCTTGACGCCCACCAAGCACCCGTTGAGCTTGGCACCGGCGCAGCAGAAG
GGTAAGGAGTGGGCAGTACCCCGTGAGATCTGGACGGAGGCAGAATTGAA
CAGCATCAAGGTGACGCATAAGGAACCCGAGCAAGCGGTCGACTACGTGG
CCCTTGGCGCCGTGCGCTTCTTGCGGCAAACGTTCGATGTTCTCGCGGGC
TTCAAGACCGGCCCCGTCGATGAGCACAAATGTGACGCATAAGGAACCCG
AGCAAGCGGTCGACTACGTGGCCCTTGGCGCCGTGCGCTTCTTGCGGCAA
ACGTTCGATGTTCTCGCGGGCTTCAAGACCGGCCCCGTCGATGAGCACAA
ATATCTGAACCGCGTTATCTTCTTGGAAACCGTGGCGGGTATCCCCGGCA
TGGTGGCGGGAGCGCTGAGGCACCTTCACTCGCTCCGCCGCATGCGCAGA
TCTGAACCGCGTTATCTTCTTGGAAACCGTGGCGGGTATCCCCGGCATGG
TGGCGGGAGCGCTGAGGCACCTTCACTCGCTCCGCCGCATGCGCAGGGAT
CACGGTTGGATCCACACCCTGCTGGAGGAGGCGGAGAACGAGCGGATGCA
CCTTCTAACATTCCTGAAGCTGAAGCAGCCGGGCCCTATCTTCCGCTTCA
TGGTGCTCATCAGCCAGGGCGTGATGTTCAACGCTTTCTTCCTCGCGTAC
GTCATCAGCCCCAAGACTTGCCACCGTTTCGTGGGCTACATCGAGGAGGA
GGCCGTCCATACCTACACCACGGGATCACGGTTGGATCCACACCCTGCTG
GAGGAGGCGGAGAACGAGCGGATGCACCTTCTAACATTCCTGAAGCTGAA
GCAGCCGGGCCCTATCTTCCGCTTCATGGTGCTCATCAGCCAGGGCGTGA
TGTTCAACGCTTTCTTCCTCGCGTACGTCATCAGCCCCAAGACTTGCCAC
CGTTTCGTGGGCTACATCGAGGAGGAGGCCGTCCATACCTACACCACGTT
GTTGAATGACCTCGACGCGAACAAGCTTCCACTTTTCAGCAACTTGCCGG
CCCCTTCAATCGCCAAGGCCTATTGGAAGCTCTCCGAGAACGCTATGTTC
CGCGATCTCGTCCTCGCCGTCAGTTGTTGAATGACCTCGACGCGAACAAG
CTTCCACTTTTCAGCAACTTGCCGGCCCCTTCAATCGCCAAGGCCTATTG
GAAGCTCTCCGAGAACGCTATGTTCCGCGATCTCGTCCTCGCCGTCAGGG
CCGACGAGGCCAACCACCGTGTGGTCAACCACACCTTCGCGGACATGCAC
AAGGAATTCAAGCAGGATGCGGGCCGACGAGGCCAACCACCGTGTGGTCA
ACCACACCTTCGCGGACATGCACAAGGAATTCAAGCAGGATGCGGTGAAC
CCGTTTAGCATCCAGGCGAAGGTCTCCGAGTACGCCGAACCGGGAGGCGT
TACTCCGCCGACCACGGCGAACATCGCCGACGGCGCTATCGAGCCCGCTA
CCTCCAACAAGAAAGAAGAGGAGAATAAGGGAAAAGCCTCGCCTTGTAGT
GTAAATGTCTCGTAGGTGAACCCGTTTAGCATCCAGGCGAAGGTCTCCGA
GTACGCCGAACCGGGAGGCGTTACTCCGCCGACCACGGCGAACATCGCCG
ACGGCGCTATCGAGCCCGCTACCTCCAACAAGAAAGAAGAGGAGAATAAG
GGAAAAGCCTCGCCTTGTAGTGTAAATGTCTCGTAG
back to top