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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 3280 |
| Cds size | 2511 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929456.6554182-UTR-F-serratus_M_contig1480:222197..222262 | 1622929456.6554182-UTR-F-serratus_M_contig1480:222197..222262 | Fucus serratus male | UTR | F-serratus_M_contig1480 222198..222262 + |
| 1690962861.576229-UTR-F-serratus_M_contig1480:222197..222262 | 1690962861.576229-UTR-F-serratus_M_contig1480:222197..222262 | Fucus serratus male | UTR | F-serratus_M_contig1480 222198..222262 + |
| 1622929456.6893787-UTR-F-serratus_M_contig1480:224773..225477 | 1622929456.6893787-UTR-F-serratus_M_contig1480:224773..225477 | Fucus serratus male | UTR | F-serratus_M_contig1480 224774..225477 + |
| 1690962861.6166368-UTR-F-serratus_M_contig1480:224773..225477 | 1690962861.6166368-UTR-F-serratus_M_contig1480:224773..225477 | Fucus serratus male | UTR | F-serratus_M_contig1480 224774..225477 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929456.6738229-CDS-F-serratus_M_contig1480:222262..224773 | 1622929456.6738229-CDS-F-serratus_M_contig1480:222262..224773 | Fucus serratus male | CDS | F-serratus_M_contig1480 222263..224773 + |
| 1690962861.5981052-CDS-F-serratus_M_contig1480:222262..224773 | 1690962861.5981052-CDS-F-serratus_M_contig1480:222262..224773 | Fucus serratus male | CDS | F-serratus_M_contig1480 222263..224773 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1480.3326.1 >prot_F-serratus_M_contig1480.3326.1 ID=prot_F-serratus_M_contig1480.3326.1|Name=mRNA_F-serratus_M_contig1480.3326.1|organism=Fucus serratus male|type=polypeptide|length=837bp
MPWMPSVPTTTAAEVPAAWGVMMAAMAAGGMLPLEEQNQEEAAACAAGRK
QRPWTWSAVRAARARARAAEAEAGGGDFLVGGPMAARVRRTAAAAAAAAI
TSASHSKSTAAAGVDSNDGSLHQEADDEKEGEATTAPGGSARSRRAWASK
EATATIPTEIAASSRPVGLLRRHGAASNPSPTCTSTKENSNPAVEVDPAV
LATLPPVPAALNAAVAAMEAAKNRCFEEAAGISVAGEGVVMMDVGEGTPS
SGSGMVAPVVSEVEASADSGGGVGKGVATSAVGLSEISAATDSPVAAGST
TSNDKNNSGSSRRFCWNTPPPTCRLPASEKAALVEEGKRALLAVRKEKRE
RERMMALAPAAILEATERDGCEKSETSLPSSPMATPARSRDRCQAHSPNR
PRPRSPDRPKPRSPDRSQPRSPDRFQPHSPGRFQPHSPGRFQPRSPDRSQ
SRTPMWASPWSPARSPGRSPGRPRRNLTRASSTQQAATDNKEGGKKTKTV
EKPPPLTLHEKAAAAAAPWAAVGAEAEGGNKARPVSKLNEAKAFLLGLVS
AAPPQQQQQLQDSSGVIGDDIGDDRTDPSGVSHVDNDGNDVSGRGRSRGR
NKTRDVKVKVFEASAQEASVGGGGMLHLIRGRWARDKGRGSRRARSLDKP
TKAPRKRKGGIVADEPCDPASSAVTNSATRCPGPGDMGKNEGENERLVVS
VPFEEEGGSEGGGVGEGGGSACVASSPVRAPVRAPLARQARFRRSTSMPD
SVSALARTGADADAGGGFETGDGGKALPGGDGAKASPGEARPTRDKHGGK
TCSTALGGVAEGGGGEVVAVTRKARGWRRMVTGPED* back to topmRNA from alignment at F-serratus_M_contig1480:222198..225477+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1480.3326.1 ID=mRNA_F-serratus_M_contig1480.3326.1|Name=mRNA_F-serratus_M_contig1480.3326.1|organism=Fucus serratus male|type=mRNA|length=3280bp|location=Sequence derived from alignment at F-serratus_M_contig1480:222198..225477+ (Fucus serratus male)
CACCCGCTGCTGTTGCCGCTACTACCAGTACCATCAGCCATCAGAAACCG
CATCAGTACCAGAAAATGCCGTGGATGCCGAGCGTTCCTACAACGACCGC
GGCGGAGGTGCCCGCGGCCTGGGGGGTGATGATGGCCGCGATGGCGGCGG
GTGGCATGCTGCCCTTGGAAGAGCAAAATCAGGAGGAAGCAGCCGCTTGT
GCCGCCGGGAGGAAACAACGACCTTGGACCTGGTCGGCAGTGCGTGCGGC
GCGAGCTCGAGCAAGGGCTGCCGAGGCGGAGGCTGGAGGAGGGGATTTCC
TGGTCGGAGGACCAATGGCTGCTCGGGTGAGGCGCACGGCTGCTGCTGCG
GCGGCGGCAGCCATCACTTCTGCTTCACATTCAAAGAGCACCGCCGCCGC
AGGGGTGGATAGTAATGATGGCTCGCTTCATCAGGAAGCCGATGATGAAA
AGGAGGGAGAGGCCACGACTGCGCCTGGAGGTAGCGCGCGCAGCAGACGT
GCGTGGGCGAGCAAGGAAGCGACGGCCACGATCCCCACAGAGATAGCGGC
TTCCTCTAGACCGGTCGGGTTGCTGCGCAGGCACGGTGCTGCGAGCAACC
CGTCGCCGACATGCACCTCCACAAAGGAAAATAGTAATCCTGCGGTGGAG
GTTGATCCCGCTGTGCTGGCGACGTTGCCGCCGGTGCCCGCTGCTCTCAA
TGCGGCCGTTGCTGCCATGGAGGCAGCAAAGAATCGATGCTTCGAAGAAG
CGGCAGGGATCTCGGTGGCAGGAGAAGGGGTAGTGATGATGGATGTGGGA
GAAGGGACCCCTTCTTCTGGATCTGGTATGGTGGCTCCCGTGGTGAGCGA
GGTGGAAGCGAGCGCAGATTCAGGCGGCGGCGTTGGCAAGGGCGTTGCAA
CATCAGCAGTAGGGCTTTCTGAAATCTCGGCCGCCACCGATTCTCCCGTG
GCAGCCGGCAGCACCACCAGCAACGATAAGAACAACAGCGGCAGCAGCCG
ACGCTTCTGCTGGAACACCCCGCCGCCTACGTGCCGCCTTCCCGCGTCCG
AGAAGGCCGCGCTGGTCGAGGAGGGAAAGCGGGCGCTACTGGCCGTCCGG
AAGGAAAAACGCGAGCGTGAGAGGATGATGGCCCTCGCCCCCGCCGCGAT
CTTGGAGGCAACGGAGCGTGACGGCTGCGAGAAGAGCGAGACGTCGCTAC
CCTCTTCTCCGATGGCCACCCCCGCGCGGTCTCGAGACCGATGCCAGGCA
CATTCCCCAAACCGACCCCGGCCACGTTCCCCCGATCGCCCCAAACCGCG
TTCCCCGGATCGATCTCAACCGCGTTCCCCGGATCGATTCCAACCCCATT
CTCCGGGCCGATTCCAGCCCCATTCACCGGGCCGATTTCAGCCGCGTTCG
CCGGACCGTTCTCAGTCACGGACTCCGATGTGGGCATCACCGTGGTCCCC
GGCGCGTTCTCCGGGCCGATCTCCTGGCCGGCCCCGGCGCAATTTGACGA
GGGCCTCAAGCACGCAGCAGGCTGCTACGGACAACAAGGAGGGCGGGAAA
AAGACAAAGACCGTAGAGAAACCACCGCCACTGACGCTGCACGAGAAGGC
GGCGGCCGCGGCTGCCCCCTGGGCCGCGGTGGGTGCTGAGGCCGAAGGAG
GGAACAAGGCGAGACCCGTCTCGAAGCTGAACGAAGCGAAGGCTTTCCTT
CTTGGCCTAGTGTCGGCGGCTCCTCCTCAGCAGCAGCAGCAGCTTCAAGA
TTCTTCCGGGGTCATTGGTGATGATATCGGCGACGACAGGACCGACCCCT
CGGGTGTTAGTCATGTCGACAACGACGGCAATGACGTCAGCGGCCGCGGC
CGGAGCCGTGGAAGAAACAAAACTAGAGACGTAAAGGTGAAGGTTTTCGA
GGCGTCCGCTCAGGAGGCGTCCGTGGGAGGAGGGGGAATGCTCCACCTCA
TCCGCGGCCGTTGGGCGCGCGATAAGGGCAGGGGCTCGCGACGTGCGCGG
AGCCTCGATAAGCCGACGAAGGCCCCCAGGAAAAGGAAGGGGGGGATCGT
TGCTGATGAGCCTTGCGATCCCGCTTCGAGCGCAGTGACTAATTCCGCGA
CTCGTTGTCCCGGGCCGGGTGACATGGGTAAAAACGAGGGGGAAAATGAG
AGGCTGGTGGTGTCGGTGCCGTTTGAGGAAGAAGGCGGCAGCGAGGGAGG
AGGAGTTGGCGAGGGGGGGGGAAGCGCTTGCGTAGCTTCGTCTCCCGTCC
GCGCGCCTGTCCGCGCGCCCCTGGCGAGACAGGCGAGATTCCGGCGTTCC
ACCAGCATGCCGGATAGCGTGAGCGCCCTCGCTCGCACTGGCGCCGACGC
CGATGCGGGAGGTGGCTTTGAGACAGGAGACGGAGGAAAGGCGCTCCCGG
GAGGAGACGGGGCCAAGGCGTCCCCGGGTGAGGCGCGACCGACGAGAGAC
AAGCACGGGGGCAAGACGTGTTCGACGGCGCTCGGAGGCGTTGCCGAAGG
GGGAGGAGGGGAAGTGGTTGCCGTGACGCGTAAAGCCAGGGGCTGGAGGA
GGATGGTCACGGGACCCGAAGACTGATAGGAGTTGACAGAAAGACTGACC
TTGACTTATGTATGGCTTGAGTAGACCTGAATTGACGTTTGATGAGTTTA
CTTTTTTTTGGCGAGGTGGCTCTAGAAGAATCATAGCGTTTTTATGAGTT
GAGGGTGTTTTTTCCCGGCGCAGATATAAATGTGAGGGGATATATATATA
TATATATATCTACTGTTTTATGTTATATATGGATTTTGGGACGAAAAATG
GTGGAATGGAACTGCGTTAAATGTTGTCCCTGGCAAAAAAGGCCGCCTTT
CGGTTCTATTGCGCGGATTCCGGGGAGGACATGATTGTTCTCAAAGCAAT
TGAATGTTATCGGTGTTTTAGACCAAATAATAGCTCTCGCGAGGTGTTGT
GTAAGGAGGCGTTTTTGTTCTCCGCGGGTCGACGAATCAGAGGATTCTGT
TGTGGGAGAGGCAAAAGTTCTCTCCCAAAGCCGCCTTTTCCATTTCCTTC
ATTCTTTTATGTCTAAAATCCGAGTTGCTGGAAACGTTTTGACCTATTTC
TTGAGATTTTTTTTTAAAAGTTTGGTCGTTGCATTCGATGTTATAAAGTT
AGTTTTGGGGACGTTTTTGTCACGATTGAAACGCGCTCGAGAGATGGTTT
TGTTTCTGATTTACGGAAGAGTCGTGTGTGTGTGTGGAGCACCATCTGAT
TCGTCATAATATAATGAATACGTTTAATAT back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1480:222198..225477+ >mRNA_F-serratus_M_contig1480.3326.1 ID=mRNA_F-serratus_M_contig1480.3326.1|Name=mRNA_F-serratus_M_contig1480.3326.1|organism=Fucus serratus male|type=CDS|length=5022bp|location=Sequence derived from alignment at F-serratus_M_contig1480:222198..225477+ (Fucus serratus male)
ATGCCGTGGATGCCGAGCGTTCCTACAACGACCGCGGCGGAGGTGCCCGC
GGCCTGGGGGGTGATGATGGCCGCGATGGCGGCGGGTGGCATGCTGCCCT
TGGAAGAGCAAAATCAGGAGGAAGCAGCCGCTTGTGCCGCCGGGAGGAAA
CAACGACCTTGGACCTGGTCGGCAGTGCGTGCGGCGCGAGCTCGAGCAAG
GGCTGCCGAGGCGGAGGCTGGAGGAGGGGATTTCCTGGTCGGAGGACCAA
TGGCTGCTCGGGTGAGGCGCACGGCTGCTGCTGCGGCGGCGGCAGCCATC
ACTTCTGCTTCACATTCAAAGAGCACCGCCGCCGCAGGGGTGGATAGTAA
TGATGGCTCGCTTCATCAGGAAGCCGATGATGAAAAGGAGGGAGAGGCCA
CGACTGCGCCTGGAGGTAGCGCGCGCAGCAGACGTGCGTGGGCGAGCAAG
GAAGCGACGGCCACGATCCCCACAGAGATAGCGGCTTCCTCTAGACCGGT
CGGGTTGCTGCGCAGGCACGGTGCTGCGAGCAACCCGTCGCCGACATGCA
CCTCCACAAAGGAAAATAGTAATCCTGCGGTGGAGGTTGATCCCGCTGTG
CTGGCGACGTTGCCGCCGGTGCCCGCTGCTCTCAATGCGGCCGTTGCTGC
CATGGAGGCAGCAAAGAATCGATGCTTCGAAGAAGCGGCAGGGATCTCGG
TGGCAGGAGAAGGGGTAGTGATGATGGATGTGGGAGAAGGGACCCCTTCT
TCTGGATCTGGTATGGTGGCTCCCGTGGTGAGCGAGGTGGAAGCGAGCGC
AGATTCAGGCGGCGGCGTTGGCAAGGGCGTTGCAACATCAGCAGTAGGGC
TTTCTGAAATCTCGGCCGCCACCGATTCTCCCGTGGCAGCCGGCAGCACC
ACCAGCAACGATAAGAACAACAGCGGCAGCAGCCGACGCTTCTGCTGGAA
CACCCCGCCGCCTACGTGCCGCCTTCCCGCGTCCGAGAAGGCCGCGCTGG
TCGAGGAGGGAAAGCGGGCGCTACTGGCCGTCCGGAAGGAAAAACGCGAG
CGTGAGAGGATGATGGCCCTCGCCCCCGCCGCGATCTTGGAGGCAACGGA
GCGTGACGGCTGCGAGAAGAGCGAGACGTCGCTACCCTCTTCTCCGATGG
CCACCCCCGCGCGGTCTCGAGACCGATGCCAGGCACATTCCCCAAACCGA
CCCCGGCCACGTTCCCCCGATCGCCCCAAACCGCGTTCCCCGGATCGATC
TCAACCGCGTTCCCCGGATCGATTCCAACCCCATTCTCCGGGCCGATTCC
AGCCCCATTCACCGGGCCGATTTCAGCCGCGTTCGCCGGACCGTTCTCAG
TCACGGACTCCGATGTGGGCATCACCGTGGTCCCCGGCGCGTTCTCCGGG
CCGATCTCCTGGCCGGCCCCGGCGCAATTTGACGAGGGCCTCAAGCACGC
AGCAGGCTGCTACGGACAACAAGGAGGGCGGGAAAAAGACAAAGACCGTA
GAGAAACCACCGCCACTGACGCTGCACGAGAAGGCGGCGGCCGCGGCTGC
CCCCTGGGCCGCGGTGGGTGCTGAGGCCGAAGGAGGGAACAAGGCGAGAC
CCGTCTCGAAGCTGAACGAAGCGAAGGCTTTCCTTCTTGGCCTAGTGTCG
GCGGCTCCTCCTCAGCAGCAGCAGCAGCTTCAAGATTCTTCCGGGGTCAT
TGGTGATGATATCGGCGACGACAGGACCGACCCCTCGGGTGTTAGTCATG
TCGACAACGACGGCAATGACGTCAGCGGCCGCGGCCGGAGCCGTGGAAGA
AACAAAACTAGAGACGTAAAGGTGAAGGTTTTCGAGGCGTCCGCTCAGGA
GGCGTCCGTGGGAGGAGGGGGAATGCTCCACCTCATCCGCGGCCGTTGGG
CGCGCGATAAGGGCAGGGGCTCGCGACGTGCGCGGAGCCTCGATAAGCCG
ACGAAGGCCCCCAGGAAAAGGAAGGGGGGGATCGTTGCTGATGAGCCTTG
CGATCCCGCTTCGAGCGCAGTGACTAATTCCGCGACTCGTTGTCCCGGGC
CGGGTGACATGGGTAAAAACGAGGGGGAAAATGAGAGGCTGGTGGTGTCG
GTGCCGTTTGAGGAAGAAGGCGGCAGCGAGGGAGGAGGAGTTGGCGAGGG
GGGGGGAAGCGCTTGCGTAGCTTCGTCTCCCGTCCGCGCGCCTGTCCGCG
CGCCCCTGGCGAGACAGGCGAGATTCCGGCGTTCCACCAGCATGCCGGAT
AGCGTGAGCGCCCTCGCTCGCACTGGCGCCGACGCCGATGCGGGAGGTGG
CTTTGAGACAGGAGACGGAGGAAAGGCGCTCCCGGGAGGAGACGGGGCCA
AGGCGTCCCCGGGTGAGGCGCGACCGACGAGAGACAAGCACGGGGGCAAG
ACGTGTTCGACGGCGCTCGGAGGCGTTGCCGAAGGGGGAGGAGGGGAAGT
GGTTGCCGTGACGCGTAAAGCCAGGGGCTGGAGGAGGATGGTCACGGGAC
CCGAAGACTGAATGCCGTGGATGCCGAGCGTTCCTACAACGACCGCGGCG
GAGGTGCCCGCGGCCTGGGGGGTGATGATGGCCGCGATGGCGGCGGGTGG
CATGCTGCCCTTGGAAGAGCAAAATCAGGAGGAAGCAGCCGCTTGTGCCG
CCGGGAGGAAACAACGACCTTGGACCTGGTCGGCAGTGCGTGCGGCGCGA
GCTCGAGCAAGGGCTGCCGAGGCGGAGGCTGGAGGAGGGGATTTCCTGGT
CGGAGGACCAATGGCTGCTCGGGTGAGGCGCACGGCTGCTGCTGCGGCGG
CGGCAGCCATCACTTCTGCTTCACATTCAAAGAGCACCGCCGCCGCAGGG
GTGGATAGTAATGATGGCTCGCTTCATCAGGAAGCCGATGATGAAAAGGA
GGGAGAGGCCACGACTGCGCCTGGAGGTAGCGCGCGCAGCAGACGTGCGT
GGGCGAGCAAGGAAGCGACGGCCACGATCCCCACAGAGATAGCGGCTTCC
TCTAGACCGGTCGGGTTGCTGCGCAGGCACGGTGCTGCGAGCAACCCGTC
GCCGACATGCACCTCCACAAAGGAAAATAGTAATCCTGCGGTGGAGGTTG
ATCCCGCTGTGCTGGCGACGTTGCCGCCGGTGCCCGCTGCTCTCAATGCG
GCCGTTGCTGCCATGGAGGCAGCAAAGAATCGATGCTTCGAAGAAGCGGC
AGGGATCTCGGTGGCAGGAGAAGGGGTAGTGATGATGGATGTGGGAGAAG
GGACCCCTTCTTCTGGATCTGGTATGGTGGCTCCCGTGGTGAGCGAGGTG
GAAGCGAGCGCAGATTCAGGCGGCGGCGTTGGCAAGGGCGTTGCAACATC
AGCAGTAGGGCTTTCTGAAATCTCGGCCGCCACCGATTCTCCCGTGGCAG
CCGGCAGCACCACCAGCAACGATAAGAACAACAGCGGCAGCAGCCGACGC
TTCTGCTGGAACACCCCGCCGCCTACGTGCCGCCTTCCCGCGTCCGAGAA
GGCCGCGCTGGTCGAGGAGGGAAAGCGGGCGCTACTGGCCGTCCGGAAGG
AAAAACGCGAGCGTGAGAGGATGATGGCCCTCGCCCCCGCCGCGATCTTG
GAGGCAACGGAGCGTGACGGCTGCGAGAAGAGCGAGACGTCGCTACCCTC
TTCTCCGATGGCCACCCCCGCGCGGTCTCGAGACCGATGCCAGGCACATT
CCCCAAACCGACCCCGGCCACGTTCCCCCGATCGCCCCAAACCGCGTTCC
CCGGATCGATCTCAACCGCGTTCCCCGGATCGATTCCAACCCCATTCTCC
GGGCCGATTCCAGCCCCATTCACCGGGCCGATTTCAGCCGCGTTCGCCGG
ACCGTTCTCAGTCACGGACTCCGATGTGGGCATCACCGTGGTCCCCGGCG
CGTTCTCCGGGCCGATCTCCTGGCCGGCCCCGGCGCAATTTGACGAGGGC
CTCAAGCACGCAGCAGGCTGCTACGGACAACAAGGAGGGCGGGAAAAAGA
CAAAGACCGTAGAGAAACCACCGCCACTGACGCTGCACGAGAAGGCGGCG
GCCGCGGCTGCCCCCTGGGCCGCGGTGGGTGCTGAGGCCGAAGGAGGGAA
CAAGGCGAGACCCGTCTCGAAGCTGAACGAAGCGAAGGCTTTCCTTCTTG
GCCTAGTGTCGGCGGCTCCTCCTCAGCAGCAGCAGCAGCTTCAAGATTCT
TCCGGGGTCATTGGTGATGATATCGGCGACGACAGGACCGACCCCTCGGG
TGTTAGTCATGTCGACAACGACGGCAATGACGTCAGCGGCCGCGGCCGGA
GCCGTGGAAGAAACAAAACTAGAGACGTAAAGGTGAAGGTTTTCGAGGCG
TCCGCTCAGGAGGCGTCCGTGGGAGGAGGGGGAATGCTCCACCTCATCCG
CGGCCGTTGGGCGCGCGATAAGGGCAGGGGCTCGCGACGTGCGCGGAGCC
TCGATAAGCCGACGAAGGCCCCCAGGAAAAGGAAGGGGGGGATCGTTGCT
GATGAGCCTTGCGATCCCGCTTCGAGCGCAGTGACTAATTCCGCGACTCG
TTGTCCCGGGCCGGGTGACATGGGTAAAAACGAGGGGGAAAATGAGAGGC
TGGTGGTGTCGGTGCCGTTTGAGGAAGAAGGCGGCAGCGAGGGAGGAGGA
GTTGGCGAGGGGGGGGGAAGCGCTTGCGTAGCTTCGTCTCCCGTCCGCGC
GCCTGTCCGCGCGCCCCTGGCGAGACAGGCGAGATTCCGGCGTTCCACCA
GCATGCCGGATAGCGTGAGCGCCCTCGCTCGCACTGGCGCCGACGCCGAT
GCGGGAGGTGGCTTTGAGACAGGAGACGGAGGAAAGGCGCTCCCGGGAGG
AGACGGGGCCAAGGCGTCCCCGGGTGAGGCGCGACCGACGAGAGACAAGC
ACGGGGGCAAGACGTGTTCGACGGCGCTCGGAGGCGTTGCCGAAGGGGGA
GGAGGGGAAGTGGTTGCCGTGACGCGTAAAGCCAGGGGCTGGAGGAGGAT
GGTCACGGGACCCGAAGACTGA back to top
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