mRNA_F-serratus_M_contig148.3310.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig148.3310.1 vs. uniprot
Match: A0A6H5KZH6_9PHAE (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH6_9PHAE) HSP 1 Score: 335 bits (859), Expect = 2.560e-102 Identity = 235/560 (41.96%), Postives = 289/560 (51.61%), Query Frame = 3
Query: 510 VHNLKAYPELRAMIGKEATREAFSCTSGDTEEKQKALRAVFRAFVTADTDIVALQVGALVKRLKSESPPASAPEISAVDTLGCDGHSPSPVGPRLRAQGST-------------VDMDDRQQRYSS-TFSSGSFDDVVCS-------------ELGKNEEIPPMLVPSGGPMRLPGS--------------------------------------VDGASD---DTVEDVTDPEDLTTEDESSHSLSIDSTSHEGTPEGARARREK---------------------------------------------AEIPS-----IAASLARKR----------VPACAFRRRGWSSSAESFTDGDGYRAAEEDRALRGLILRLSEEYPGDIGIMMPLLLNYLRMSKGESFFMAANEPHAYLKGNILEVMARSDNVVRVALTPKYRDVPLLCEILTYNMGAPPIVSPVAEDAYCARYTPPIQDFEMLDIQVPSQDEYTLPRAPVAALVIILAGGGYASDRIARLRLRTGMTLFVPAHTPIVF-HSMVD---EMWICLARSNLNF 1793
V++L+ YPELRAM+G EAT +AF+C SG E ++ ALR +FR VTA+TD+V QV LV+RLKSE A ++ V G + +D+ S+ S SF D V S E G++ ++ + G +R+ VDG SD DT ++VTD ED+ TE++ S S H T RAR A I S +A+S+ +P CAFRRRGWSSS +F D G R A+ED ALR LILRL+EEYPGDIGIMMPLLLNYLRM +GESFFMAANEPHAYLKG+ILEVMARSDNVVRVALTPK+RDVPLLC+ILTYNMGAPPIV+P+ D C+RYTPPI+DFEMLDIQVP EY P APVAAL I++AG G A RL GM FVPA T +V+ +S V +W+CLARSN+N+
Sbjct: 173 VYSLEIYPELRAMVGAEATAQAFACNSGVREHEENALRVLFRGLVTANTDVVTAQVNNLVERLKSEFRHGRAEKLCTESNRSNSNGGLHVVDVNYNGPGHSRGXXXXXXXXXXXXSIDNADDELSTWRGKSDSFADRVSSSDPVRHRNFGAICEDGEDSDMVAAEIQQEGVLRVASXXXXXXXXXXXXXXXXXXXXXXXXDSENLKNQQMQMLHVVDGGSDGTADTADEVTDNEDMHTEEDDSSQ----SHRHPRTNGHDRARNSXXXXXXXXXXISTVHTSNNXXXXXXXXXXXXXXXGYASANHGVHGVAGISSTGKDHLASSVRHNAAXXXXXXXXXIPPCAFRRRGWSSSILAFADVTGQRRAKEDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQCCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGVACAGNGTQRLCRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNINY 728
BLAST of mRNA_F-serratus_M_contig148.3310.1 vs. uniprot
Match: D7FIF4_ECTSI (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF4_ECTSI) HSP 1 Score: 253 bits (647), Expect = 4.360e-78 Identity = 128/165 (77.58%), Postives = 139/165 (84.24%), Query Frame = 1
Query: 1 MRRLHTALQQYAWGKRGSQSMVAQLKQAECSGFEIDEVETYAELWMGTHPNGPSRVMDFINSEGGHDVGLPSQRLDESPDRPGMFLVELLETFPHYLGDQEELGDLPFMFKVLSIDKALSIQAHPDKKLAERLNATRPDLYKDDNHKPEMAVALSDFEGLCGFRP 495
MRRL TALQ+YAWGK GS SMVAQLK++E S F++DE +TYAELWMGTHPNGPSRVM GH+ Q L S + PGMFL+ELLET PHYLGDQE +GDLPFMFKVLSI+KALSIQAHPDKKLAERL ATRPDLYKDDNHKPEMAVALSDFEGLCGFRP
Sbjct: 1 MRRLETALQRYAWGKSGSDSMVAQLKKSEDSDFDVDEGQTYAELWMGTHPNGPSRVM-----RDGHEGTDELQGLYGSAEGPGMFLIELLETHPHYLGDQEHVGDLPFMFKVLSINKALSIQAHPDKKLAERLYATRPDLYKDDNHKPEMAVALSDFEGLCGFRP 160
BLAST of mRNA_F-serratus_M_contig148.3310.1 vs. uniprot
Match: D7FIF5_ECTSI (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF5_ECTSI) HSP 1 Score: 239 bits (611), Expect = 1.220e-72 Identity = 119/170 (70.00%), Postives = 139/170 (81.76%), Query Frame = 3
Query: 1296 MMPLLLNYLRMSKGESFFMAANEPHAYLKGNILEVMARSDNVVRVALTPKYRDVPLLCEILTYNMGAPPIVSPVAEDAYCARYTPPIQDFEMLDIQVPSQDEYTLPRAPVAALVIILAGGGYASDRIARLRLRTGMTLFVPAHTPIVF-HSMVD---EMWICLARSNLNF 1793
MMPLLLNYLRM +GESFFMAANEPHAYLKG+ILEVMARSDNVVRVALTPK+RDVPLLC+ILTYNMGAPPIV+P+ D +C+RYTPPI+DFEMLDIQVP EY P APVAAL +++AG G+A R RL GM FVPA T +V+ +S V +W+CLARSN+N+
Sbjct: 1 MMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAVVMAGTGFACAGNGRQRLCRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNINY 170
BLAST of mRNA_F-serratus_M_contig148.3310.1 vs. uniprot
Match: A0A0R5QPG6_SACJA (Mannose-6-phosphate isomerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A0R5QPG6_SACJA) HSP 1 Score: 236 bits (601), Expect = 6.420e-69 Identity = 124/180 (68.89%), Postives = 136/180 (75.56%), Query Frame = 1
Query: 1 MRRLHTALQQYAWGKRGSQSMVAQLKQAECSGFEIDEVETYAELWMGTHPNGPSRVM----DFIN-SEGGHDVGLPSQRLDESPDRPGMFLVELLETFPHYLGDQEELGDLPFMFKVLSIDKALSIQAHPDKKLAERLNATRPDLYKDDNHKPEMAVALSDFEGLCGFRPLGRLQFTTSR 525
MRRL+ +Q YAWGKRGS SMVA+LK E GFE +E + YAELWMGTHPNGPSRVM DF+ +E GH G+FL+ELLET PHYLGD E+LGDLPFMFKVLSI+KALSIQAHPDKKLAERL ATRPDLYKDDNHKPEMAVALSDFEGLCGFRP + F R
Sbjct: 1 MRRLNCPVQNYAWGKRGSDSMVAKLKTLENEGFETEEGKMYAELWMGTHPNGPSRVMPEAGDFVEGAEEGH---------------AGIFLIELLETHPHYLGDLEKLGDLPFMFKVLSINKALSIQAHPDKKLAERLYATRPDLYKDDNHKPEMAVALSDFEGLCGFRPFEEIVFNLHR 165
BLAST of mRNA_F-serratus_M_contig148.3310.1 vs. uniprot
Match: D7FIF1_ECTSI (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF1_ECTSI) HSP 1 Score: 234 bits (597), Expect = 1.640e-68 Identity = 123/180 (68.33%), Postives = 135/180 (75.00%), Query Frame = 1
Query: 1 MRRLHTALQQYAWGKRGSQSMVAQLKQAECSGFEIDEVETYAELWMGTHPNGPSRVM----DF-INSEGGHDVGLPSQRLDESPDRPGMFLVELLETFPHYLGDQEELGDLPFMFKVLSIDKALSIQAHPDKKLAERLNATRPDLYKDDNHKPEMAVALSDFEGLCGFRPLGRLQFTTSR 525
MRRL+ A+Q YAWGKRG SMV++LK E GFE +E +TYAELWMGTHPNGPSRVM DF +E GH G+FL+ELLET PHYLGD +E GDLPFMFKVLSI+KALSIQAHPDKKLAERL ATRPDLYKDDNHKPEMAVALSDFEGLCGFRP + F R
Sbjct: 1 MRRLNCAVQNYAWGKRGKDSMVSKLKMMENEGFETEEDKTYAELWMGTHPNGPSRVMPEPGDFSAGAEEGH---------------AGIFLIELLETHPHYLGDLQEQGDLPFMFKVLSINKALSIQAHPDKKLAERLYATRPDLYKDDNHKPEMAVALSDFEGLCGFRPFEEIVFNLHR 165
BLAST of mRNA_F-serratus_M_contig148.3310.1 vs. uniprot
Match: A0A6H5KTB4_9PHAE (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB4_9PHAE) HSP 1 Score: 235 bits (600), Expect = 3.440e-67 Identity = 121/175 (69.14%), Postives = 135/175 (77.14%), Query Frame = 1
Query: 1 MRRLHTALQQYAWGKRGSQSMVAQLKQAECSGFEIDEVETYAELWMGTHPNGPSRVMDFINSEGGHDVGLPSQRLDESPDRPGMFLVELLETFPHYLGDQEELGDLPFMFKVLSIDKALSIQAHPDKKLAERLNATRPDLYKDDNHKPEMAVALSDFEGLCGFRPLGRLQFTTSR 525
MRRL+ A+Q YAWGKRG SMV++LK E GFE ++ +TYAELWMGTHPNGPSRVM + G S+ +E G+FL+ELLET PHYLGD +E GDLPFMFKVLSIDKALSIQAHPDKKLAERL ATRPDLYKDDNHKPEMAVALSDFEGLCGFRP + F R
Sbjct: 1 MRRLNCAVQNYAWGKRGKDSMVSKLKMMENEGFETEDDKTYAELWMGTHPNGPSRVMP--------EPGDFSEGAEEG--HAGIFLIELLETHPHYLGDLQEQGDLPFMFKVLSIDKALSIQAHPDKKLAERLYATRPDLYKDDNHKPEMAVALSDFEGLCGFRPFEEIVFNLHR 165
BLAST of mRNA_F-serratus_M_contig148.3310.1 vs. uniprot
Match: A0A835YY41_9STRA (Mannose-6-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY41_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.640e-57 Identity = 102/196 (52.04%), Postives = 143/196 (72.96%), Query Frame = 3
Query: 1218 RAAEEDRALRGLILRLSEEYPGDIGIMMPLLLNYLRMSKGESFFMAANEPHAYLKGNILEVMARSDNVVRVALTPKYRDVPLLCEILTYNMGAPPIVSPVAEDAYCARYTPPIQDFEMLDIQVPSQDEYTLPRAPVAALVIILAGGGYASDRI--ARLRLRTGMTLFVPAHTPIVFHSMVDE--MWICLARSNLNF 1793
R E+R++ L+LRL+EEYPGDIGIMMPLLLNYLR+ G++FFM ANEPHAYL+G+I+EVMARSDNVVRVALTPKYRDVPLLC+ILTY MGAPP+V P YC R+TPP+ DFE+ + +P +++ V ++ ++L G G+A+D A L +G+++FVPA + F + + + + +A +N+++
Sbjct: 254 RLRAEERSIHKLMLRLNEEYPGDIGIMMPLLLNYLRLEPGQAFFMGANEPHAYLRGDIMEVMARSDNVVRVALTPKYRDVPLLCDILTYKMGAPPLVLPRRVSPYCLRFTPPVADFELEVVTLPHAQQFSFDSIKVPSIFLVLGGTGWATDDDGGAEKELWSGVSMFVPARCAVNFRATSTDAPLLVAVAHTNIHW 449
BLAST of mRNA_F-serratus_M_contig148.3310.1 vs. uniprot
Match: D7FPP3_ECTSI (Mannose-6-phosphate isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPP3_ECTSI) HSP 1 Score: 199 bits (507), Expect = 3.470e-53 Identity = 159/427 (37.24%), Postives = 220/427 (51.52%), Query Frame = 3
Query: 510 VHNLKAYPELRAMIGKEATREAFSCTSGDTEEKQK-ALRAVFRAFVTADTDIVALQVGALVKRLKSESPPASAPE-ISA-VDTLGCDGHSPSPVGPRLRAQ-------GSTVDMDDRQQRYSSTFSSGSFDDVVCSELGKNEEIPPML--VPS---GGPMRLPGSVDGASDDTVEDVTDPEDLTTEDESSHSLSIDSTSHEGTPEGARARREKAEIPSIAASLARKRVPACAFRRRGWSSSAESFTDGDGYRAAEEDRALRGLILRLSEEYPGDIGIMMPLLLNYLRMSKGESFFMAANEPHAYLKGNILEVMARSDNVVRVALTPKYRDVPLLCEILTYNMGAPPIVSPVAEDAYCARYTPPIQDFEMLDIQVPSQDEYTLPRAPVAALVIILAGGG----YASDRIARLRLRTGMTLFVPAHTPI 1733
V NL AYPELR+M+ A + C +GD E+Q+ AL+ +F +FV D ++V QV ALV RL+ P + P+ +SA ++ L D +P P+ L A+ G V + + + + G + E G PP L VPS G P R DGA D S+ S P GA R+ ++ +A + + AFR G +A R ED + ++LRLS+EYPGD+GI+MPL+LN L + G +FFM +EPHAYL+G+ILEVMA S+NVVR ALTPK+RDV LL E+LTYNMGAP ++ DA RYTPPI DFE+ +QVP+ + Y L PV +++ L GG S ++ G F+PA TP+
Sbjct: 150 VWNLHAYPELRSMVSYGALKAV--CKAGDDVERQRSALKKLFGSFVKCDKNVVRTQVAALVSRLEKNFPAEATPDDVSASMNGLKID-QAPEPLREVLAAKSAAGQDNGGAVPDEQKTLNKNPSMHLGGYV-FKGGEQGGAPSPPPTLGTVPSFSVGSPSR-----DGADCDA--------------------SVSS------PPGAEERKRAEDV--LADVDKSEEIFGKAFR--GGPKAAAGLMA----RLQREDADSQRVMLRLSKEYPGDLGILMPLMLNLLHLKPGLAFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPAETVDACRKRYTPPINDFEIQILQVPANERYELEAMPVPVVMVALEGGDGGRVIESKTDREIKACEGGVFFLPAFTPV 533
BLAST of mRNA_F-serratus_M_contig148.3310.1 vs. uniprot
Match: A0A0R5QMD6_SACJA (Mannose-6-phosphate isomerase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A0R5QMD6_SACJA) HSP 1 Score: 194 bits (493), Expect = 1.630e-50 Identity = 162/469 (34.54%), Postives = 231/469 (49.25%), Query Frame = 3
Query: 510 VHNLKAYPELRAMIGKEATREAFSCTSGDTEEKQK-ALRAVFRAFVTADTDIVALQVGALVKRLKSESP------PASAPEISAVDTLGCDGHSPSPVGPRLRAQGSTVDMDDRQQRYSSTFSSG--------------SFDDVVCSELGKNEEIPPMLVPSGGPMRLPGSVDGASDDTVEDV-TDPEDLTTEDESSHSLSID----------STSHEGTPEGARARRE---KAEIPSIAASLARKRVPACAFRRRGWSSSAESFTDGDGYRAAEEDRALRGLILRLSEEYPGDIGIMMPLLLNYLRMSKGESFFMAANEPHAYLKGNILEVMARSDNVVRVALTPKYRDVPLLCEILTYNMGAPPIVSPVAEDAYCARYTPPIQDFEMLDIQVPSQDEYTLPRAPVAALVIILAGGG----YASDRIARLRLRTGMTLFVPAHTPIVFHSMV--DEMWICLARSNLNF 1793
V NL AYPELR M+ A + C++GD +Q+ AL+ +F +FV D ++V QV ALV RL+ +P P S P + +P P+ L A + V+ S D V + + I + M L GS+ G + V T P + D L +D S S +G+ E + R E K ++A A + + AFR G +A R ED + ++LR S+EYPGD+GI+MPL+LN L++ G +FFM +EPHAYL+G+ILEVMA S+NVVR ALTPK+RDV LL E+LTYNMGAP ++ DA RYTPPI DFE+ +QVP+ + Y L V +++ LAGG S+ ++ G F+PA+TP+V S D + + LA +NL++
Sbjct: 150 VWNLHAYPELRGMVSYSALKAV--CSAGDDVARQRMALKKLFGSFVKCDKNVVRTQVAALVSRLEKNAPVVNPGRPVSPPPSKNPE------RAPEPIREALIAHKAAVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADGCVIPAVPEGCVIGGGSLTRNASMHLGGSMRGGAGGRQAMVGTLPSAKLSHDSLDRMLDVDVGXXXXXXAVSVSGDGS-ESSPIRAEPGDKCARDTLADETASEEIFGKAFR--GGPEAATRLAA----RLQREDADSQRVMLRPSKEYPGDLGILMPLMLNLLQLKPGLAFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPAETVDACRKRYTPPINDFEIQILQVPANERYELEAMEVPVVMVALAGGADGRVIESESGREIKACEGGVFFLPAYTPVVVCSGTKGDGIKMALAHTNLHW 603
BLAST of mRNA_F-serratus_M_contig148.3310.1 vs. uniprot
Match: D8LB30_ECTSI (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB30_ECTSI) HSP 1 Score: 172 bits (437), Expect = 9.190e-44 Identity = 90/164 (54.88%), Postives = 113/164 (68.90%), Query Frame = 1
Query: 4 RRLHTALQQYAWGKRGSQSMVAQLKQAECSGFEIDEVETYAELWMGTHPNGPSRVMDFINSEGGHDVGLPSQRLDESPDRPGMFLVELLETFPHYLGDQEELGDLPFMFKVLSIDKALSIQAHPDKKLAERLNATRPDLYKDDNHKPEMAVALSDFEGLCGFRP 495
RR+ + +Q+YAWGK G QS+VA LK A S +++D + YAE+W+GTHP+GPS ++ NS R G L + L + P LGD GDLPF+FKV+SI+KALSIQAHP+KKLAERL+A RP++Y DDNHKPEMAV LSDFE LCGFRP
Sbjct: 3 RRMSSFIQKYAWGKPGDQSVVASLKAAGDSSYQVDVDQPYAEMWIGTHPSGPSNLL--TNS-----------------GRVGPLLKDHLASEPEALGDIAHKGDLPFLFKVISINKALSIQAHPNKKLAERLHAERPEVYADDNHKPEMAVTLSDFEALCGFRP 147 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig148.3310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig148.3310.1 >prot_F-serratus_M_contig148.3310.1 ID=prot_F-serratus_M_contig148.3310.1|Name=mRNA_F-serratus_M_contig148.3310.1|organism=Fucus serratus male|type=polypeptide|length=416bp MIGKEATREAFSCTSGDTEEKQKALRAVFRAFVTADTDIVALQVGALVKRback to top mRNA from alignment at F-serratus_M_contig148:6811..11744+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig148.3310.1 ID=mRNA_F-serratus_M_contig148.3310.1|Name=mRNA_F-serratus_M_contig148.3310.1|organism=Fucus serratus male|type=mRNA|length=4934bp|location=Sequence derived from alignment at F-serratus_M_contig148:6811..11744+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig148:6811..11744+ >mRNA_F-serratus_M_contig148.3310.1 ID=mRNA_F-serratus_M_contig148.3310.1|Name=mRNA_F-serratus_M_contig148.3310.1|organism=Fucus serratus male|type=CDS|length=2496bp|location=Sequence derived from alignment at F-serratus_M_contig148:6811..11744+ (Fucus serratus male)back to top |