prot_F-serratus_M_contig1479.3307.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1479.3307.1
Unique Nameprot_F-serratus_M_contig1479.3307.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length86
Homology
BLAST of mRNA_F-serratus_M_contig1479.3307.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 1.830e-16
Identity = 41/88 (46.59%), Postives = 53/88 (60.23%), Query Frame = 0
Query:    2 LTADDCCVGRIRDANVYCDDSEVAPCIIGSGSICI---SNGLSGLENDGV-CCVTGCPQCGGSGCGSEAQRVGLPSSDCCRGPIISSG 85
            L ++ CC G I+ +  YCDD+  APCIIGS    +   SNGL G++ +GV CC   C QCGG+GC +     GL S  CC G I +SG
Sbjct:  508 LGSESCCGGGIKASGAYCDDTNEAPCIIGSRPTTVETCSNGLEGIDGNGVVCCPLECNQCGGTGCTTSGSAAGLGSESCCGGGIKASG 595          
BLAST of mRNA_F-serratus_M_contig1479.3307.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 3.840e-16
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 0
Query:    2 LTADDCCVGRIRDANVYCDDSEVAPCIIGS--------GSICISNGLSGLENDGV-CCVTGCPQCGGSGCGSEAQRVGLPSSDCCRGPIISSG 85
            L    CC G ++ ++ YCD++  APCIIGS         + C SNGL G++ +GV CC  GC QCGG+GC +     GL  S CC G I +SG
Sbjct:  229 LDGSSCCGGGVKASDEYCDETNEAPCIIGSRPTPSPTSANTC-SNGLEGIDGNGVVCCPLGCGQCGGTGCNTSGAAAGLDGSSCCGGSIKASG 320          
BLAST of mRNA_F-serratus_M_contig1479.3307.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.140e-12
Identity = 37/99 (37.37%), Postives = 51/99 (51.52%), Query Frame = 0
Query:    2 LTADDCCVGRIRDANVYCDDSEVAPCIIGSG-------------SICISNGLSGLENDGV-CCVTGCPQCGGSGCGSEAQRVGLPSSDCCRGPIISSGV 86
            L ++ CC G ++   +YCDD+  APCIIGS              +   S+G  G++ +GV CC  GC QC G GCG+     GL S  CC   + S G+
Sbjct:  374 LGSESCCGGGVKSLGLYCDDTNEAPCIIGSRPDTDDVDSESADETQTCSDGTEGIDGNGVVCCPIGCGQCAGDGCGTAGSANGLGSESCCGNGVKSLGL 472          
BLAST of mRNA_F-serratus_M_contig1479.3307.1 vs. uniprot
Match: D8LTS2_ECTSI (Similar to Gram-negative bacteria-binding protein 1, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS2_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 7.270e-6
Identity = 25/53 (47.17%), Postives = 33/53 (62.26%), Query Frame = 0
Query:   33 SICISNGLSGLENDGVCCVTGCPQCGGSGCGSEAQRVGLPSSDCCRGPIISSG 85
            S+C +NG+SG+E+DGVCC   C QCGGSGC       G  ++ CC   I+  G
Sbjct:  199 SVC-TNGVSGIESDGVCCEISCGQCGGSGCSMR----GNGAASCCTSTILEVG 246          
BLAST of mRNA_F-serratus_M_contig1479.3307.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 3.220e-5
Identity = 27/84 (32.14%), Postives = 41/84 (48.81%), Query Frame = 0
Query:    3 TADDCCVGRIRDANVYCDDSEVAPCIIGSGSICISNGLSGLENDG-VCCVTGCPQCGGSGCGSEAQRVGLPSSDCCRGPIISSG 85
            T D   +G   + ++   D+ V      +     SNG+ G++ +G VCC   C QCGGSGC    +  GL +  CC   + +SG
Sbjct:  494 TVDYLVLGHQLNTSLETGDAGVVEAFDSASVTTCSNGVQGIDGNGIVCCPMECNQCGGSGCTHAGRAAGLGAESCCGSGVKASG 577          
BLAST of mRNA_F-serratus_M_contig1479.3307.1 vs. uniprot
Match: D7FIC5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIC5_ECTSI)

HSP 1 Score: 49.7 bits (117), Expect = 5.950e-5
Identity = 24/54 (44.44%), Postives = 30/54 (55.56%), Query Frame = 0
Query:   32 GSICISNGLSGLENDGV-CCVTGCPQCGGSGCGSEAQRVGLPSSDCCRGPIISS 84
            G+   SNGL G++ +GV CC   C QCGG GC +     GL    CC G I +S
Sbjct:  444 GTETCSNGLEGIDGNGVVCCPLACGQCGGKGCYTSGSANGLSGDSCCGGGIKAS 497          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1479.3307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FQV4_ECTSI1.830e-1646.59Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
A0A6H5JC43_9PHAE3.840e-1644.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G651_ECTSI1.140e-1237.37Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectoca... [more]
D8LTS2_ECTSI7.270e-647.17Similar to Gram-negative bacteria-binding protein ... [more]
D7FUJ9_ECTSI3.220e-532.14Unsaturated glucuronyl hydrolase, family GH88 n=3 ... [more]
D7FIC5_ECTSI5.950e-544.44Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1479contigF-serratus_M_contig1479:62926..63801 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1479.3307.1mRNA_F-serratus_M_contig1479.3307.1Fucus serratus malemRNAF-serratus_M_contig1479 62925..63801 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1479.3307.1 ID=prot_F-serratus_M_contig1479.3307.1|Name=mRNA_F-serratus_M_contig1479.3307.1|organism=Fucus serratus male|type=polypeptide|length=86bp
DLTADDCCVGRIRDANVYCDDSEVAPCIIGSGSICISNGLSGLENDGVCC
VTGCPQCGGSGCGSEAQRVGLPSSDCCRGPIISSGV
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