prot_F-serratus_M_contig1479.3306.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1479.3306.1
Unique Nameprot_F-serratus_M_contig1479.3306.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length101
Homology
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BLAST of mRNA_F-serratus_M_contig1479.3306.1 vs. uniprot
Match: D7G3X5_ECTSI (VWFD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X5_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 4.410e-16
Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 0 
Query:    8 IIDGPCGPALTITLEWSETDSDLDLYVMEPGGSVVSFWSMVGSVGFLDMDVIMGPGIETYTIFRFLDPDSLDIIGDYQFQAIRFSGPIET 97
            + +  C P+LTITLEW+   SD+DLYV+EPGG VV F +  G VGFLD D   G G E Y I   LDP +  ++G+Y+     +SG   T
Sbjct:  432 VSNSACVPSLTITLEWTGETSDVDLYVVEPGGEVVYFSNRGGDVGFLDNDDTYGFGPENYIIDSALDPAASQVLGEYETYVKLYSGDAAT 521
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BLAST of mRNA_F-serratus_M_contig1479.3306.1 vs. uniprot
Match: D7G5D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D6_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 7.220e-16
Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 0 
Query:    8 IIDGPCGPALTITLEWSETDSDLDLYVMEPGGSVVSFWSMVGSVGFLDMDVIMGPGIETYTIFRFLDPDSLDIIGDYQFQAIRFSGPIET 97
            + +  C P+LTITLEW+   SD+DLYV+EPGG VV F +  G VGFLD D   G G E Y I   LDP +  ++G+Y+     +SG   T
Sbjct:  306 VSNSACVPSLTITLEWTGEISDVDLYVVEPGGEVVYFSNRGGDVGFLDNDDTYGFGPENYIIDSALDPAASQVLGEYETYVKLYSGDAAT 395
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BLAST of mRNA_F-serratus_M_contig1479.3306.1 vs. uniprot
Match: A0A2P6JQ26_9PSED (Uncharacterized protein n=1 Tax=Pseudomonas sp. MYb185 TaxID=1848729 RepID=A0A2P6JQ26_9PSED)

HSP 1 Score: 49.7 bits (117), Expect = 9.480e-5
Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 0 
Query:   18 TITLEWSETDSDLDLYVMEPGGSVVSFWSMVGSVGFLDMDVIMGPGIETY 67
            T TL W+ +  D+DL+V EPGG+ V + SMVG VG+LD+D ++  G E Y
Sbjct:  207 TATLTWNGS-GDVDLHVYEPGGAHVYYASMVGDVGYLDVDNVVANGPEHY 255
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BLAST of mRNA_F-serratus_M_contig1479.3306.1 vs. uniprot
Match: UPI001C45F83E (hypothetical protein n=1 Tax=Pseudomonas sp. MYb185 TaxID=1848729 RepID=UPI001C45F83E)

HSP 1 Score: 49.7 bits (117), Expect = 9.890e-5
Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 0 
Query:   18 TITLEWSETDSDLDLYVMEPGGSVVSFWSMVGSVGFLDMDVIMGPGIETY 67
            T TL W+ +  D+DL+V EPGG+ V + SMVG VG+LD+D ++  G E Y
Sbjct:  302 TATLTWNGS-GDVDLHVYEPGGAHVYYASMVGDVGYLDVDNVVANGPEHY 350
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1479.3306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G3X5_ECTSI4.410e-1646.67VWFD domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G5D6_ECTSI7.220e-1646.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2P6JQ26_9PSED9.480e-550.00Uncharacterized protein n=1 Tax=Pseudomonas sp. MY... [more]
UPI001C45F83E9.890e-550.00hypothetical protein n=1 Tax=Pseudomonas sp. MYb18... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1479contigF-serratus_M_contig1479:61189..62118 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1479.3306.1mRNA_F-serratus_M_contig1479.3306.1Fucus serratus malemRNAF-serratus_M_contig1479 61187..62118 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1479.3306.1 ID=prot_F-serratus_M_contig1479.3306.1|Name=mRNA_F-serratus_M_contig1479.3306.1|organism=Fucus serratus male|type=polypeptide|length=101bp
VSETAPCIIDGPCGPALTITLEWSETDSDLDLYVMEPGGSVVSFWSMVGS
VGFLDMDVIMGPGIETYTIFRFLDPDSLDIIGDYQFQAIRFSGPIETNFT
L
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