mRNA_F-serratus_M_contig1478.3304.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1478.3304.1
Unique NamemRNA_F-serratus_M_contig1478.3304.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1478.3304.1 vs. uniprot
Match: D8LKZ6_ECTSI (Endo/excinuclease amino terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ6_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 2.600e-90
Identity = 141/178 (79.21%), Postives = 154/178 (86.52%), Query Frame = 2 
Query:  386 RKKFFHCYLLQSQDPKHPRSTYIGFTVDPGRRVRQHNGGIAGGAFRTKHKRPWDMVAIVHGFPSKSSALQFEAAWQYPQRDRRIKVKVCDLPVDARRTVGVMGKLRLCKAMLCLDPWARYGLGIRFLRQDFARTYGALMLPQPLPPAGAPYTEVTIGGREALPVYASLTESKSDGFES 919
            RKKFFHCYLLQSQDPKH RSTYIGFTVDPGRR+RQHNG I GGAFRTK KRPWDMVAIVHGFPSKSSALQFEAAWQ+PQRDRRIKVKV DLPVD+RRTVGV GKLRLCKAMLCLDPWARYGLGIRFLR+++A +Y  L LPQPLP  G P TE++ G +E LPVY S   S+ +  E+
Sbjct:    7 RKKFFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQHNGDIIGGAFRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVPDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAASYSKLNLPQPLPVKGDPDTELSTGAQEGLPVYKSPPGSQEERLEA 184
[Close]
BLAST of mRNA_F-serratus_M_contig1478.3304.1 vs. uniprot
Match: A0A2Z5TRH2_9NEOP (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Reticulitermes speratus TaxID=60591 RepID=A0A2Z5TRH2_9NEOP)

HSP 1 Score: 170 bits (431), Expect = 2.190e-44
Identity = 112/274 (40.88%), Postives = 150/274 (54.74%), Query Frame = 2 
Query:  389 KKFFHCYLLQSQDPKHPRSTYIGFTVDPGRRVRQHNGGI-AGGAFRTKHKRPWDMVAIVHGFPSKSSALQFEAAWQYPQRDRRIKVKVCDLPVDARRTVGVMGK--LRLCKAMLCLDPWARYGLGIRFLRQDFARTYGA-LMLPQPLPPAGAPYTEVTIGGREALPVYASLTESKSDGFESLRAPNAKCGLCCRFLNRGTMVLCCR-GCGVPAHVRCLAARMLQESGNMSEMIPSEGSCPAPSCGRHLLWSQLVRDVCAYQPPMSTSNDENHED 1195
            ++F+  YLL   +PK+   TYIG+TVDP RR+ QHN G  AGGA+RT  + PW+MV I+HGFPS  SAL+FE AWQ+PQR RR+K       V  +RT   M    LR+   ML + PW R  L I +L+Q+FAR +   L  P  +P A  P      G  +     AS T  + D       P   C LC   +     + C   GC + AHV CLA R L++ GN   +IP EG CPA  C  H+LW+ LVR        ++T++ ++H D
Sbjct:    9 ERFYGVYLLYCTNPKYKGRTYIGYTVDPNRRIVQHNKGKRAGGAWRTSKRGPWEMVLIIHGFPSDISALRFEWAWQHPQRSRRLK------HVQKKRTHEKMYDFCLRILSEMLRVGPWNRLALTICWLKQEFAREFPTDLCPPLHMPIAYGPVVIKKTGRAQGT---ASQTSVQDDD------PLCVCSLCYEVVQPSEKITCLSPGCLLVAHVICLAKRFLKK-GNF--IIPIEGHCPA--CNTHVLWADLVRKKRGCYKELTTTSTDSHGD 262
[Close]
BLAST of mRNA_F-serratus_M_contig1478.3304.1 vs. uniprot
Match: SLX1_MOUSE (Structure-specific endonuclease subunit SLX1 n=22 Tax=Tetrapoda TaxID=32523 RepID=SLX1_MOUSE)

HSP 1 Score: 168 bits (425), Expect = 1.760e-43
Identity = 103/251 (41.04%), Postives = 134/251 (53.39%), Query Frame = 2 
Query:  392 KFFHCYLLQSQDPKHPRSTYIGFTVDPGRRVRQHNGGIA-GGAFRTKHKRPWDMVAIVHGFPSKSSALQFEAAWQYPQRDRRIKVKVCDLPVDARRTVGVMGKLRLCKAMLCLDPWARYGLGIRFLRQDFARTYGALMLPQPLPPAGAPYTEVTIGGREALPVYASLTESKSDGFESLRAPNAKCGLCCRFLNRGTMVLCCR--GCGVPAHVRCLAARMLQESGNMSEMIPSEGSCPAPSCGRHLLWSQLV 1135
            +FF  YLL  Q+P+H    Y+GFTV+P RRVRQHN G   GGA+RT  + PWDMV I+HGFPS  +AL+FE AWQ+PQ  RR+      +    R        LR+   ML + PW R  L +R+LR DF           P PPA  P        +  +P   +++E+ S+    L    A+C LC R L      LCC   GC + AH+ CLA   LQE     +++P EG CP  SC + LLW  LV
Sbjct:    9 RFFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLIIHGFPSAVAALRFEWAWQHPQASRRLT----HVGPRLRSEAAFAFHLRVLAHMLRVPPWVRLPLTLRWLRPDFRHELC------PAPPAHMPIAFGPPPPQPLVPKRPAVSEADSERQLDL-GTKARCSLCARLLQDEEGPLCCPHPGCPLRAHIICLAEEFLQEEPG--QLLPLEGHCP--SCKKSLLWGNLV 244
[Close]
BLAST of mRNA_F-serratus_M_contig1478.3304.1 vs. uniprot
Match: A0A250YEF1_CASCN (Structure-specific endonuclease subunit SLX1 n=4 Tax=Castor canadensis TaxID=51338 RepID=A0A250YEF1_CASCN)

HSP 1 Score: 167 bits (422), Expect = 5.100e-43
Identity = 109/275 (39.64%), Postives = 142/275 (51.64%), Query Frame = 2 
Query:  383 KRKKFFHCYLLQSQDPKHPRSTYIGFTVDPGRRVRQHNGGIA-GGAFRTKHKRPWDMVAIVHGFPSKSSALQFEAAWQYPQRDRRIKVKVCDLPVDARRTVGVMGKLRLCKAMLCLDPWARYGLGIRFLRQDFARTYGALMLPQPLPPAGAPYTEVTIGGREALPVYASLTESKSDGFESLRAPNAKCGLCCRFLNRGTMVLCCR--GCGVPAHVRCLAARMLQESGNMSEMIPSEGSCPAPSCGRHLLWSQLVRDVCAYQPPMSTSNDENHEDH 1198
            K ++FF  YLL  Q+P+H    Y+GFTV+P RRVRQHNGG   GGA+RT  + PW+MV IVHGFPS  +AL+FE AWQ+PQ  RR+      +    R        LR+   ML   PWAR  L +R+LRQDF +         P PP   P     +  R       +   + SD    L A ++ C LC R L      LCC    C + AH+ CLA   L+E     +++P EG CP  SC   LLW  L+  +C+  P     + E  EDH
Sbjct:    9 KPRRFFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNGGRKKGGAWRTSGRGPWEMVLIVHGFPSAVAALRFEWAWQHPQASRRL----AHVGPRLRSEAAFAFHLRVLAHMLRAPPWARLPLTLRWLRQDFRQDLC------PPPPPHVPLAFGPLPPRTCALKCRTGPVADSDSGPDLGAGDS-CTLCARALQDEEGPLCCPHPDCPLRAHMTCLAEEFLREEPG--QLLPLEGQCP--SCKNTLLWGDLIW-LCSMGPEEEEEDSELEEDH 267
[Close]
BLAST of mRNA_F-serratus_M_contig1478.3304.1 vs. uniprot
Match: UPI001875140D (structure-specific endonuclease subunit SLX1 isoform X1 n=2 Tax=Manis TaxID=9973 RepID=UPI001875140D)

HSP 1 Score: 167 bits (422), Expect = 5.100e-43
Identity = 109/270 (40.37%), Postives = 140/270 (51.85%), Query Frame = 2 
Query:  335 DGARGDSAPASRSAALKRKKFFHCYLLQSQDPKHPRSTYIGFTVDPGRRVRQHNGGIA-GGAFRTKHKRPWDMVAIVHGFPSKSSALQFEAAWQYPQRDRRIKVKVCDLPVDARRTVGVMGKLRLCKAMLCLDPWARYGLGIRFLRQDFARTYGALMLPQPLPPAGAPYTEVTIGGREALPVYASLTESKSDGFESLRAPNAKCGLCCRFLNRGTMVLCC--RGCGVPAHVRCLAARMLQESGNMSEMIPSEGSCPAPSCGRHLLWSQLV 1135
            D ARG + P          +FF  YLL   +P+H    Y+GFTV+P RRV+QHNGG   GGA+RT  + PW+MV IVHGFPS  +AL+FE AWQ+P   RR+      +    R        LR+   ML   PWAR  L +R+LR DF+R       PQ +P A  P        R     +A  T+S+ D     +AP A C +C R L  G   LCC   GC + AH+ CLA   LQE     +++P EG CP   C   LLW  L+
Sbjct:    2 DPARGAARPG---------RFFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAYRTSGRGPWEMVLIVHGFPSAVAALRFEWAWQHPHASRRL----AHVGPRLRAEAAFAFHLRVLAHMLRAPPWARLPLTLRWLRADFSRDL-CPPPPQHVPLAFGPLPPGASAPRRPAVPFAD-TQSEPD-----QAPEACCSVCGRVLKDGEGPLCCPYAGCPLRAHMICLAGEFLQEEPG--QLLPLEGQCPG--CKNSLLWGDLI 247
[Close]
BLAST of mRNA_F-serratus_M_contig1478.3304.1 vs. uniprot
Match: UPI000B4F1E1A (structure-specific endonuclease subunit SLX1 n=1 Tax=Meriones unguiculatus TaxID=10047 RepID=UPI000B4F1E1A)

HSP 1 Score: 166 bits (420), Expect = 8.620e-43
Identity = 104/253 (41.11%), Postives = 130/253 (51.38%), Query Frame = 2 
Query:  392 KFFHCYLLQSQDPKHPRSTYIGFTVDPGRRVRQHNGGIA-GGAFRTKHKRPWDMVAIVHGFPSKSSALQFEAAWQYPQRDRRIKVKVCDLPVDARRTVGVMGKLRLCKAMLCLDPWARYGLGIRFLRQDFARTYGALMLPQPLPPAGAPYTEVTIGGREALPVYASLTESKSDGFESLRAPNA--KCGLCCRFLNRGTMVLCCR--GCGVPAHVRCLAARMLQESGNMSEMIPSEGSCPAPSCGRHLLWSQLV 1135
            +FF  YLL  Q+P+H    Y+GFTV+P RRVRQHN G   GGA+RT  + PWDMV I+HGFPS  +AL+FE AWQ+PQ  RR+      +    R        LR+   ML   PWAR  L +R+LR DF R          L PA  P+  +  G   A P        +    E    P A   C LC R L      LCC   GC + AH+ CLA   LQE     +++P EG CP  SC + +LW  LV
Sbjct:    9 RFFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILHGFPSAVAALRFEWAWQHPQASRRLT----HVGPRLRGEAAFAFHLRVLAHMLRAPPWARLPLTVRWLRPDFRRD---------LCPAPPPHMPIAFGPPPARPSVQKRLAVREADDEPQPDPGAPSSCSLCARALQDEEGPLCCPHPGCTLRAHIICLAEEFLQEEPG--QLLPLEGRCP--SCRKSVLWGHLV 244
[Close]
BLAST of mRNA_F-serratus_M_contig1478.3304.1 vs. uniprot
Match: UPI001485D895 (structure-specific endonuclease subunit SLX1 isoform X1 n=3 Tax=Arvicanthis niloticus TaxID=61156 RepID=UPI001485D895)

HSP 1 Score: 167 bits (424), Expect = 1.460e-42
Identity = 105/254 (41.34%), Postives = 136/254 (53.54%), Query Frame = 2 
Query:  392 KFFHCYLLQSQDPKHPRSTYIGFTVDPGRRVRQHNGGIA-GGAFRTKHKRPWDMVAIVHGFPSKSSALQFEAAWQYPQRDRRIKVKVCDLPVDARRTVGVMGKLRLCKAMLCLDPWARYGLGIRFLRQDFARTYGALMLPQPLPPAGAPYTEVTIGGREALPVYASL-TESKSDGFESLR--APNAKCGLCCRFLNRGTMVLCCR--GCGVPAHVRCLAARMLQESGNMSEMIPSEGSCPAPSCGRHLLWSQLV 1135
            +FF  YLL  Q+P+H    Y+GFTV+P RRVRQHN G   GGA+RT  + PWDMV I+HGFPS  +AL+FE AWQ+PQ  RR+      +    R        LR+   ML + PW R  L +R+LR DF            L PA  P+  +  G     P+ +   T S++D  + L   A N+ C LC R L      LCC   GC + AH+ CLA   LQE     +++P EG CP  SC + LLW  LV
Sbjct:   77 RFFGVYLLYCQNPRHRGRVYVGFTVNPDRRVRQHNAGRKKGGAWRTSGRGPWDMVLIIHGFPSAVAALRFEWAWQHPQASRRLT----HVGPRLRSEAAFAFHLRVLAHMLRIPPWVRLPLTLRWLRPDFRHE---------LCPAPPPHMPIAFGPPPPQPLVSKRPTASEADSQQQLELGAKNS-CTLCARMLQDEEGPLCCPHPGCSLRAHIICLAEEFLQEEPG--QLLPLEGHCP--SCKKSLLWGNLV 312
[Close]
BLAST of mRNA_F-serratus_M_contig1478.3304.1 vs. uniprot
Match: A0A2J7QZB8_9NEOP (Structure-specific endonuclease subunit SLX1 homolog n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QZB8_9NEOP)

HSP 1 Score: 164 bits (416), Expect = 2.530e-42
Identity = 101/270 (37.41%), Postives = 145/270 (53.70%), Query Frame = 2 
Query:  389 KKFFHCYLLQSQDPKHPRSTYIGFTVDPGRRVRQHNGGI-AGGAFRTKHKRPWDMVAIVHGFPSKSSALQFEAAWQYPQRDRRIKVKVCDLPVDARRTVGVMGKLRLCKAMLCLDPWARYGLGIRFLRQDFARTYGA-LMLPQPLPPAGAPYTEVTIGGREALPVYASLTESKSDGFESLRAPNAKCGLCCRFLNRGTMVLCCR-GCGVPAHVRCLAARMLQESGNMSEMIPSEGSCPAPSCGRHLLWSQLVRDVCAYQPPMSTSNDENH 1189
            ++F+  YLL   +PK+   TYIG+TVDP RR++QHN G  AGGA+RT ++ PW+MV I+HGFP+  SAL+FE AWQ+PQR RR++      P +          LR+   ML + PW R  L +++L+Q+FAR +   L  P  +P A  P     I   +      S+ +           P   C LC   ++    + C    C + AHV CLA R L+  GN   +IP EG CPA  CG H+LW  LVR        ++++  ++H
Sbjct:    9 ERFYGVYLLYCTNPKYEGRTYIGYTVDPNRRIKQHNKGKHAGGAWRTSNRGPWEMVLIIHGFPNDISALRFEWAWQHPQRSRRLRHITKKKPREKMYDFC----LRILSEMLQVGPWNRLALTVQWLKQEFAREFPTDLCPPLHMPIAYGPVVSKKIDHTQGATSQTSVQDDD---------PVCVCSLCYEVVHPSEKISCLAPSCLLVAHVICLAKRFLK--GNF--IIPVEGHCPA--CGMHILWGDLVRKKKGCYSDLTSTGTDSH 259
[Close]
BLAST of mRNA_F-serratus_M_contig1478.3304.1 vs. uniprot
Match: A0A7R9GI94_9CRUS (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9GI94_9CRUS)

HSP 1 Score: 165 bits (417), Expect = 3.970e-42
Identity = 105/276 (38.04%), Postives = 146/276 (52.90%), Query Frame = 2 
Query:  320 MSQPDDGARGDSAPASRSAALKRKKFFH-CYLLQSQDPKHPRSTYIGFTVDPGRRVRQHNGGIA-GGAFRTKHKRPWDMVAIVHGFPSKSSALQFEAAWQYPQRDRRIKVKVCDLPVDARRTVGVMGKLRLCKAMLCLDPWARYGLGIRFLRQDFARTYGALMLPQPLPPAGAPYTEVTIGGREALPVYASLTESKSDGFESLRAPNAKCGLCCRFLNRGTMVLCCRGCGVPAHVRCLAARMLQESGNMSE-MIPSEGSCPAPSCGRHLLWSQLVR 1138
            MSQ    AR   +P  R    +  + FH  YLL S +PK+   TYIG+TVDP RR+ QHN G   GGAFRT ++ PWDMV IVHGFP+  SAL+FE AWQ+P+R RR++   C +PV   R       + L   MLC+DPW R  L +R+L   +   +      + +PP+   Y +  +  R    V  + T S S    S       C +C   +      L C GC    H+RCLA   L+ SG +++ ++P  G+CP  +C   ++W  LVR
Sbjct:   12 MSQAVTAAR---SPRGREDDFEEVENFHGVYLLCSTNPKYKGWTYIGYTVDPNRRIVQHNKGRKHGGAFRTSNRGPWDMVLIVHGFPNDVSALRFEWAWQHPKRSRRLR---CIIPVKKSRMTKFQWLIELLGRMLCVDPWCRLPLTLRWLMPKYKTPFTG----EWIPPSHIQYVDGLVKSRRIRDVLENSTHSASGNGSSC------CLVCGEDVASVADQLRCFGCYNKFHLRCLADLFLRRSGEVTDGIVPVSGTCP--TCDLQVMWGDLVR 269
[Close]
BLAST of mRNA_F-serratus_M_contig1478.3304.1 vs. uniprot
Match: UPI00032AF497 (structure-specific endonuclease subunit SLX1 n=2 Tax=Ochotona TaxID=9977 RepID=UPI00032AF497)

HSP 1 Score: 163 bits (412), Expect = 1.290e-41
Identity = 105/259 (40.54%), Postives = 133/259 (51.35%), Query Frame = 2 
Query:  374 AALKRKKFFHCYLLQSQDPKHPRSTYIGFTVDPGRRVRQHNGGIA-GGAFRTKHKRPWDMVAIVHGFPSKSSALQFEAAWQYPQRDRRIKVKVCDLPVDARRTVGVMGKLRLCKAMLCLDPWARYGLGIRFLRQDFARTYGALMLPQP--LPPAGAPYTEVTIGGREALPVYASLTESKSDGFESLRAPNAKCGLCCRFLNRGTMVLCCR--GCGVPAHVRCLAARMLQESGNMSEMIPSEGSCPAPSCGRHLLWSQLV 1135
            AA+K  +FF  YLL   +P+H    Y+GFTV+P RRVRQHNGG   GGA+RT  + PW+MV IVHGFPS  +AL+FE AWQ+P   RR+      +    R        LR+   ML   PW R  L +R+LR DF +    L  P P  +P +  P     +  R      A    S     E+ +     C LC R L      LCC   GCG+ AHV CLA   L+E     +++P EG CP  SC   LLW  LV
Sbjct:    6 AAVKPGRFFGVYLLYCLNPRHRGRVYVGFTVNPARRVRQHNGGRKKGGAWRTSGRGPWEMVLIVHGFPSAVAALRFEWAWQHPHASRRL----AHVGPRQRSEASFAFHLRVLAQMLRAPPWTRLPLTLRWLRADFCQE---LCPPPPPHMPLSFGPPPPRALAPRRCAGTLADTEPSP----EAQQESEVSCTLCFRALQDAEGPLCCPHPGCGLKAHVICLAEEFLREEPE--QLVPLEGQCP--SCQSSLLWGDLV 249
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1478.3304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKZ6_ECTSI2.600e-9079.21Endo/excinuclease amino terminal domain-containing... [more]
A0A2Z5TRH2_9NEOP2.190e-4440.88Structure-specific endonuclease subunit SLX1 homol... [more]
SLX1_MOUSE1.760e-4341.04Structure-specific endonuclease subunit SLX1 n=22 ... [more]
A0A250YEF1_CASCN5.100e-4339.64Structure-specific endonuclease subunit SLX1 n=4 T... [more]
UPI001875140D5.100e-4340.37structure-specific endonuclease subunit SLX1 isofo... [more]
UPI000B4F1E1A8.620e-4341.11structure-specific endonuclease subunit SLX1 n=1 T... [more]
UPI001485D8951.460e-4241.34structure-specific endonuclease subunit SLX1 isofo... [more]
A0A2J7QZB8_9NEOP2.530e-4237.41Structure-specific endonuclease subunit SLX1 homol... [more]
A0A7R9GI94_9CRUS3.970e-4238.04Structure-specific endonuclease subunit SLX1 homol... [more]
UPI00032AF4971.290e-4140.54structure-specific endonuclease subunit SLX1 n=2 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1478contigF-serratus_M_contig1478:198963..212497 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score295.8
Seed ortholog evalue3.8e-77
Seed eggNOG ortholog2880.D8LKZ6
KEGG koko:K15078
KEGG Pathwayko03460,map03460
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000723,GO:0001325,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008821,GO:0009893,GO:0009987,GO:0010604,GO:0010638,GO:0016043,GO:0016787,GO:0016788,GO:0016888,GO:0016889,GO:0016893,GO:0016894,GO:0017108,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031325,GO:0031974,GO:0031981,GO:0032200,GO:0032204,GO:0032206,GO:0032991,GO:0033043,GO:0033044,GO:0033557,GO:0034641,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045935,GO:0046483,GO:0048256,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051052,GO:0051054,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051276,GO:0060249,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090656,GO:0090737,GO:0140097,GO:1901360,GO:1904429,GO:1904431,GO:2001252
EggNOG free text desc.5'-flap endonuclease activity
EggNOG OGsKOG3005@1,KOG3005@2759
Ec32 ortholog descriptionGIY-YIG nuclease superfamily
Ec32 orthologEc-11_006130.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Exons5
Model size2274
Cds size1518
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929452.9946082-UTR-F-serratus_M_contig1478:198962..1992671622929452.9946082-UTR-F-serratus_M_contig1478:198962..199267Fucus serratus maleUTRF-serratus_M_contig1478 198963..199267 +
1690962859.7710292-UTR-F-serratus_M_contig1478:198962..1992671690962859.7710292-UTR-F-serratus_M_contig1478:198962..199267Fucus serratus maleUTRF-serratus_M_contig1478 198963..199267 +
1622929453.0105119-UTR-F-serratus_M_contig1478:208992..2090061622929453.0105119-UTR-F-serratus_M_contig1478:208992..209006Fucus serratus maleUTRF-serratus_M_contig1478 208993..209006 +
1690962859.7842762-UTR-F-serratus_M_contig1478:208992..2090061690962859.7842762-UTR-F-serratus_M_contig1478:208992..209006Fucus serratus maleUTRF-serratus_M_contig1478 208993..209006 +
1622929453.095231-UTR-F-serratus_M_contig1478:212060..2124971622929453.095231-UTR-F-serratus_M_contig1478:212060..212497Fucus serratus maleUTRF-serratus_M_contig1478 212061..212497 +
1690962859.8500495-UTR-F-serratus_M_contig1478:212060..2124971690962859.8500495-UTR-F-serratus_M_contig1478:212060..212497Fucus serratus maleUTRF-serratus_M_contig1478 212061..212497 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929453.028753-CDS-F-serratus_M_contig1478:209006..2091821622929453.028753-CDS-F-serratus_M_contig1478:209006..209182Fucus serratus maleCDSF-serratus_M_contig1478 209007..209182 +
1690962859.7953813-CDS-F-serratus_M_contig1478:209006..2091821690962859.7953813-CDS-F-serratus_M_contig1478:209006..209182Fucus serratus maleCDSF-serratus_M_contig1478 209007..209182 +
1622929453.0481923-CDS-F-serratus_M_contig1478:210095..2101231622929453.0481923-CDS-F-serratus_M_contig1478:210095..210123Fucus serratus maleCDSF-serratus_M_contig1478 210096..210123 +
1690962859.8074403-CDS-F-serratus_M_contig1478:210095..2101231690962859.8074403-CDS-F-serratus_M_contig1478:210095..210123Fucus serratus maleCDSF-serratus_M_contig1478 210096..210123 +
1622929453.0673778-CDS-F-serratus_M_contig1478:210477..2106951622929453.0673778-CDS-F-serratus_M_contig1478:210477..210695Fucus serratus maleCDSF-serratus_M_contig1478 210478..210695 +
1690962859.819452-CDS-F-serratus_M_contig1478:210477..2106951690962859.819452-CDS-F-serratus_M_contig1478:210477..210695Fucus serratus maleCDSF-serratus_M_contig1478 210478..210695 +
1622929453.0841727-CDS-F-serratus_M_contig1478:210964..2120601622929453.0841727-CDS-F-serratus_M_contig1478:210964..212060Fucus serratus maleCDSF-serratus_M_contig1478 210965..212060 +
1690962859.8314936-CDS-F-serratus_M_contig1478:210964..2120601690962859.8314936-CDS-F-serratus_M_contig1478:210964..212060Fucus serratus maleCDSF-serratus_M_contig1478 210965..212060 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1478.3304.1prot_F-serratus_M_contig1478.3304.1Fucus serratus malepolypeptideF-serratus_M_contig1478 209007..212060 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1478.3304.1

>prot_F-serratus_M_contig1478.3304.1 ID=prot_F-serratus_M_contig1478.3304.1|Name=mRNA_F-serratus_M_contig1478.3304.1|organism=Fucus serratus male|type=polypeptide|length=506bp
MSQPDDGARGDSAPASRSAALKRKKFFHCYLLQSQDPKHPRSTYIGFTVD
PGRRVRQHNGGIAGGAFRTKHKRPWDMVAIVHGFPSKSSALQFEAAWQYP
QRDRRIKVKVCDLPVDARRTVGVMGKLRLCKAMLCLDPWARYGLGIRFLR
QDFARTYGALMLPQPLPPAGAPYTEVTIGGREALPVYASLTESKSDGFES
LRAPNAKCGLCCRFLNRGTMVLCCRGCGVPAHVRCLAARMLQESGNMSEM
IPSEGSCPAPSCGRHLLWSQLVRDVCAYQPPMSTSNDENHEDHNAGGNNV
DCFGTRSGDRNPKVPLVWRVDDSSDDDDGSDNDSNASVDEEANARFTDSE
ERGRGACSGSDVSSIAFVGVTQSTEQEADDDDDESFWRLSGSPDCTQPTA
IDKETKHWDPQPIRGHPAQSTGSIAACSLPRTTTAASRDVERLCASDGVR
VSPSLTGTKSGCTGGRKGEEGSYLSQEGSEEEDSSPIVLKLSLAERLRLK
RSVLF*
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mRNA from alignment at F-serratus_M_contig1478:198963..212497+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1478.3304.1 ID=mRNA_F-serratus_M_contig1478.3304.1|Name=mRNA_F-serratus_M_contig1478.3304.1|organism=Fucus serratus male|type=mRNA|length=13535bp|location=Sequence derived from alignment at F-serratus_M_contig1478:198963..212497+ (Fucus serratus male)
ATAACGCCCCCACCCTTGTCGTAACCGTTTACCGCTGGCTATCCTTGCGG
GAGAGGTGGAAAGTGATAAGCGCCTTCCATATTTTTCTCTGTCGGGATCT
GTGGGGACAGGGTGTGTTGTTTTTGAAATCGAACCCCAAAGGAGAAATGG
AAAGAGCACGAGTATATCTACTTTAGTCGGACCTTCCTTCTGCAAGTAGT
AACAACAATTGCTTGAACAATTGTGTTCATCAAGCTGCGACTTGCGACTT
GCAGGAAGATTCATCTACGGCAGCATCAACTTCAGGATATTGGTCTCTCG
CGGAGGTGAGCTCGATGCTGTAGCTGTAACCAAGAAACGTTGATATTGAA
CGTATCACTCGGCCTCCATGGTAGAGCGATCATCCGAGCCGTTGTGCCTT
AGTGGGTTTTGCCCCGCAAGCGAAAATTACCGTCTGACCTTCGCATCGAC
ATGAAAAAATCCAACGACCTTATTTAGGGCCGGTCTATGAAGTGATATAA
AATCAAATGTGAAAAAATGTCGAATGTGAATTGAAATTTGACGTCGAAAA
CCACCTTTTTTCACGTCTAAAATTGTTTTCGACGTACACAACTCCGAGAG
CTAGAGTCGGGCATGAGGACTCGACACTTGCTGCAAGTGGGTCGGTCGGC
CGAACGTCGCTTGGACAGTTACGTAGACTACAACAGCAGCGGTTGCTACA
GCGTTTACAGGGACACTACCGTCTCCCCAACCTGCGCTAATGTGCACAAC
TCCTATGAAGTACTACTGGTTCCAATCGAGATACATTTGACACTCCGTAC
TCCGTCCGTGGGCTTCAGGCATACGCACCCCACACCCCACACGTGCAGGT
TTACTCCTTCTGAACTGCCTCACGTAGTAATATAAACCCACATTTTGGCG
ACATACGATTGTCCTCTATGAGTAGTACACTGTTATGCGATGCACCAGAG
CTCCAGTCGCATGGTACCTACAGTACAGCTAGCATACATTTGAGAGACGT
GGATTTTGCGTACAGGAATACAATCTACCAACAAAGTCAGCTCTTTCCTT
TACAGCCGTCGGCTTTCGTGAGATATCAAGCCCAGCAGCGCTGATGGAGT
TACTGCTGCCCATCGAGATACGCGTGGTAGTCCGTGAGCTTCAGGCAACG
CAGACCAACAGTCGCAGGTTTACTCCTACAGAACAGCGTCATTCAAGTAT
CACTGCGACGTGGTTTGTGGAACAGCGGCGCTGCACCGGCAGGCGTCCAC
CGCGGTGCAGCAATTTGTTTTGGAAAACAGTGTTCAAAATAACGTACTGG
TACTTTCAACATGCCCACTTCATACCAATAGTGGGTGTGGGACAGAGAGG
CGCATATTATTTGGTCCATGGTGATCTGCCAAGGCAGCACTCGTTCGGAG
CTACCTCGAGGTTTACTGGCTCTGTGCCGGCGGACTCTTGGCAGTGAACG
CCATCGGTACGCAATTGCGTGACCCGATAAACTCGGGACTGGCCCAATGG
CGTGTAGCGGTTTAAATAAATAAATGGACACCGCCGCGGAAATCGGGAGG
AATCCCGTAAGTAAGTACCAGATTCAGCCTGAGTGTGGAGACGAAGCAGG
CTGGCGCGGGACGGGGCGGCTGAACCCGTCTCGCGAGACCAAATTCGCAG
GCACGTACGCGGACAGGGGAATATTCATTTTCCCTGTTCAGCTGACCACG
AGCAGGATTGGCAACCTTACCCGGTTGATTCATACTCTTGCTATATGTGA
TGTCCATACATACATACATACACACATACTACAAGAGTAGTAATATCAGA
GTCAGTTGTACAGTACTGAATGAAGTTGTTGTGATGTGTGTTGCTGTACG
TCGTGCGTTATTCACAGTAGACACCCCTATTAGTAGTATGAAGATGGCTT
GGCGCGTAGAATGGTGAAACAAGTAGTGTTTTTGACGTCAAATATTTGAC
GTTTTTGACTTTGAAAGACGACTTTTTGGTGGCTGCGAAGACCGGCCCTT
ATGTATTGTCAGCACTTTGAGCAGATTATACATATATACGCCGCCGCGGA
ACTCGGGAGGAATCCCGCTAGTAAGCACCAGATTTAGCCTGAGTATAGAG
ATGAGCAGGCTGACGCGGGACGGGACTGCCTAACCCGTCCCGCGAGACCA
AATTTTCAGGCACGAACGCGGACAAGGAAATATATTTTTCCCGTTCAGCT
GACCACGAGCAGGATTGGCAACCTTACCCGGTTGATCAATACTCTTGCTA
TTATATGTGATGACCATACATACACACATGGCATAGCATAGATCAAACGG
ATACGGTTGCTAATCCTACACGTGGTCAGCCGAACAGGGAAAATTATGTT
TCCCTCTCCCCGTTCGTGCCGAAGAAATGATGACGCGGGACGGAACGGCC
CACCCTGTCTCGCTAGCCCGTTCATTCTCCACACTCGGGTTGAATCTGGT
GCTTACTCACAGGATTCCTCCCGCTTTCCGCGACGGCGTCCATTTGTCCA
TCTACTATGATACCGTCAACCGCTATCTGGTCAGCAGCGCTCGTGCGTGT
TTGCGCCATGCATCCGTTTCATTTTTCTGGGTTCCCTGCGCATCCCTGCT
AAAGGAAGGACTCTACCCACGATAAGATGGCAGGCCTCACGAGATGGAGT
GTGCTTGGTTGGTGCAAGGGTTTGCTTTGATGGGGAGATGAATACACACT
GAATCAAGTGGTAGGGCGGTATCCATTGCGCTATTTTTTTTCTGCTTTTT
CTGCTTTTTTTTTGGCGTAGCACAGGCGTGTAAGAGGCGATTATGCTCCT
GCATATGCTACTTTTAGGTGTTTTTGCATCCAATTATGCTCCCCATTTGG
GGGGGGTCAATTATGCTTCAAAGAGGCGCTATAATGCTCGTGAAATATGC
TACGTTGTGGATGTTGACGCTTCCCCTTGCCCCTTGCTACCTGTTTGTAA
TATTCACGTCTCGTTTCCGGCTTGTTTACTCTGGCCTTGGCTGGCGACAT
CGCATTTTTCATTCACCGCGTTCACAATGTTGTGTTCAACGCATGTATGT
GTGATGTATGCATGCATGTATGTATGTATGTAAAGTATACATCTGCGCGC
ATACCAAACCGAAACATATACCACATAATTGGACTTTGTCGGGGATGGTG
AAATCAATTAATATCATATTTCCAGAAAACACAGAGCAGTACGTTATGTT
GTGCTCCAGGTGTCAAAAGGTCAAATTCTCGAGGTGAGGCAGTACAGCAC
CAAGGGAAACGGTAGGACCACGGACCCTCTCGACGTTCACACCGCTACAA
AAGAACTGAAGCCACCGCAATATCACAAGGGCATACAGCACAGCAGTCCA
AGGAAGAGCGTCCCTGATACTTTTTTATTTTTTATTTTTTTATTTTTTCC
CCTGTTGTACTTGAAAAAGACCGACGCCCTAGGTCGCTATAGCAAGTCTC
TTGCCTCTCGTCCAAGCACGCGCGAAGCATAGAAAACACGCGCTCCATGA
AAGCAAAAGATGGCTGAATCAACGCTATGTCCTTCGCTACATTGTACCAA
CAAAAGAAGCTTCAGCCTGCTGTCATGCCAAAAAGCCCACAGGTCGTGCC
CAGCATCCGCATTAGACGCGGCGATGTTGTAGTCGGCTTTTTCTGGCTCG
AGGTTGTGGACGACGTCAGTGTTTACGAATGGAAATACTTGTTGGAGGAT
CTCGATATCCGAGATGTCTAGAGGACGCAGCTTCACGTTAGTAAAGTTGA
AGAGTCTCGCAGCCTCGAGCATTCGAATGGTGCCACGAGAGCGCAGCCGG
CACTGGGCAATCATGCCAACATACTCCTTTGGCCAGCAAGATGGCAAGAG
GGTTCGTTCGACCGACTCGGCGGATCGGACCAGTCGCCGGCGCGCCCGCC
TTGGGTAGAGGGCGTGTTCTCAAACTTTGACACGTCCAACGTAGACTCTT
CTTCTGGCTGTTGTAGTTCTTCACAGTAGTTTTCATAACTTCCTTCGTCG
GAGCGCGCGCATGAATCGAGACTTGACTTTCTATGACCGTTTGCTATACG
CACTGCTGTGGTGCTGTGGTATGTACTGCTGTACTGCTGGTCACTGTTGT
GTGATTGTGTGCGGGTTTTTGTGTCTTCTTTTTATGAACTTGTTAACGTG
TTGAATTGTAATTGTTTGCGATAAATAGGTGGGTTATCGGTTATCGCTGC
TGTAACGCATTTATGTGTAGCCTTTTGTCTCCAGGAATCCTTTGAGCCAA
AAAAAATCTCGGCTGGGAGCATTCGATTTTTGTTTTTTTCCTGGGCGATA
TTTTGGCGAGTGTTTTTTTCGAAAAGAAATCTTCGTAAGAAAAGTTTTTT
CCCCAAGATCGTTTTGGGCCCTGCAACCCAAAAAATTGTTGAAAAAAAAT
CGTAACAAACCACCTGAGCCTCTCAGGCAAAAATGCGTGAGAGGCGGGAG
GCTCAAGAGCGTCTTGCCCGTGAAGCGCGCCAGAAGAGGCGAAACAGCAT
CGCCTGCAAGGACGCCAGCAGCTTTGCCGGCTGAAGCAGACGGGGTAGCT
GCCTCGGCCACTCCCGCCCGCAGGGGTGTTGCAGCGGCCCAAGAATATCG
GCCTCATCAAGCCTTATCCCCTCGTCAGGCCCCTATCTTGGCGAAAAAGC
AAGCGGCGGATCAAAAACGGACGCGATGCAATACTTCTGAGGCAGCAGCG
CGAGCTGATAAAAAGTGTCGCAAGGGCAAGACAAGCGGCGCTGCTCGCCC
ACGAGCGGCAAAGGCGCCAAAACGGCGCAATCGCAGCGCAAAGCTGCAGC
GGCCGCTAAGAAAGCGGCGCGCGCACGAGAAACCGTCGCTAAGGCAAAAG
AACTTCAGGCAAAAATGAGGGAACACTGAATTTTTACCTGAAGTTCTCTT
GCCTTAACGGCGGCTTCTTTGTCGCGCCCCGCTTTCTTAGCGGCAACTGC
AGCTTTTCGCTACGGTTGCGCCGTTTCGGCGCGTTTGCCGCGTGTTTGCC
GCTCGTGAGCGAGCAGTTTAGCTTGTCTTGCCTTTGCGGCACTTTTTCTC
TGCACGCGCTGCTGCCCCAGAAGCATATGGCATCGCGCCTTTTTTATCCA
CCGCTTGCTTTTTCGCCAAGATAGCGGTCCGACGAGGGGATAAAGCTTGA
TGAGTACGATATCCTTGGGCCGCTGCGACACCCCTGCGGGCGGGAGTGGC
CCAGGCAGCTACCCGGTCTGTTTCATCCGGAGAAGCTTCTGGCGTCCTTG
TAGGCGATGCTGTTTCGCCTTTTCTGGCGCGCTTGACGCACTTGAGCCTC
CCGACTCTCCCGCATTTTTGCCTGAGAGGTTCAGGGTAGAGTGTATCGGC
AACATTGACGTAGTTTTTTCAGGGAAAAGTGAGGGGCAGATAACGCTGTG
CGACGTATCGTACGTACCGGACTTGAAATTTCATCTTTTTCCGTTCCACA
AGGCACAGCGGACACATGTCATCATTTTAGATGCAGCAGGAGATCACGTC
GTAGGGGAAAACCTCTCTCTCCCTTGCGAGAAAAGCGGATCGTACTTGCG
AGCGACCCGGCATGCGCCCGGTACCGTAGGAGCCAAGCCAAGGACGAGCC
GAGCCCTAGCTAGTCAGATTTCTGCCCCCCTGAGTAGCTGTGTGCCGCCT
TTCCCCTCGAAAACCGTGTTGAACTTCAAGTCCGGTACGCACGAGACGTC
GCACAGCGTTATCTGCTCCTCACTTCTCCCGTGAAAAACTACGTCAATTT
TTCCGATACACTCTACCCTGAGGCCGTTTCTTACGAGGATTTTTTTTCAA
GAATTATTTTGGTTGGGAGGGTAAAATAAATCATTGAAAAAAATCGTCAG
GTGGTGCACAATCTGAAGATCTCGGACCGTCTCTTACGATCCAAGAGTTT
TTTCCAAAATAATATTCCTGGCTTTGTTTGCAGCGTATTTCGTAGTGCGT
AAGGAGGGGATGGGGTGGGGTGGGAGGACGCGGATGGAAGAATATGTGAC
GGATAACCGACGGTTCTTGTCAGCATCGTGGTTAATTGCACGCATGCTTA
GAACCCAAAGCTACTGTAGAGAGAGACCAAAACGGTCTACACCTTATTAC
ACCTTACCGAAGAAAAAACTATCGGGCGCTCGTCTTTTCGCCGACCGCTA
GGCTGGACTCTCAGTAATAACCCCTTCAGTTTCACCAATTTATTTAGTGG
AAATAAAGCAGAGGTGGGAAAATATTTATATAGAGAGAGAAGTGCAGCAA
GCATGCTGCTGCTGCGTGTGCGAGAAAATATGTACAACAGTAGCAGCAGC
GCAGTTTGGGGTCTACGATGTGTATGTGTGCGCCATGCAGCAGTCGTTAT
CGTTCATTGATGCATAGTAGATCTTGCCTAGGAGCGAGCGAGCGACGTGA
GCAGACCCAAGTTTGTGTAGCAACTGAGCAGCGCAAATTTGATGAACTGC
GGCTACTCTGCGTTTGAACTACTGCTTGGTACGTGGCCATCTGCTTGCTA
CGAGCGCGTGGACGACTAGACAGCTTGCATGTCGGGTTCCGGAATTATCA
GTCATCCCCTACGCGACGAGCCCGGACTGAAAACAAAAAAAAGCCAATGA
TCATTCCAGATCATCAGTGAACACACGCGAAGTCTCAGAAGGGTCAATGG
GGTCACCGATACATTGGGGCCAGATTTACTGGTATTGATGGAGCACTGCA
AAACTCGGAAGACCTTTACATCGACAAGAGGCCGTGCTGGCGGGTACAGC
AGTCCTGCCACACACGTTCGTCAAGGCTCTTGGGGCAACGTTTGTGTGAC
TCGATGCATGTATGAGTACAGCAGAGAATACAgtcgTGTGTACGTACAGC
AGGAGACATCGTATCTACAGTAAGTAAGTATTATAGTACAGTACTGGGAA
GGTACACCTCATTGGCTACTGATTTCATTTGTTTTATACAGTAATCCCAA
AAACATCCTCGAAAAAAATCATCTTTTCTCCAGGAATTCTTCGAGCCAAA
AAATTCCTCGGCTGGGAGTATTCGAGCATTTTTTTTCCTGAGCGATTGTT
TGGCGAGTGTTTTTTTCGATAAAAATTCCTCGTGAGAAACGTTTTTTTTT
TCCTCCGCAAGATGTTTTGGGCCCTGCAACCCAAATAATTGCTGGaAAAA
AAAAATCCTCGTAAGAAACCACCTGAGCCTCTCAGGCAAAAATGCGGGAG
AGTCGGGAGGCTCAAGAGCGTCTTGCCCGTGAAGCGCGCCAGAAGCGGCG
AAACAGCATCGCCTACAAGGACGCCAGCAGCTTTGCCGGCTGAAGCAGAC
CGGGTAGCTGCCTCGGCCACTCCCTCCCGCAGAGGGTTCGCAGCGGCCCA
AGAATATCGGCCCCATCAAGCCTTATCCCCTCGTCAGGCCGCTATCTTGG
CGAAAAAGCAAGCGGCGGATAAAAAAAGGACGCGATGCTAAACTTCTGAG
GCAGCAACGCGAGCTGACAAAAAGTGCCGCAAGGGCAAGACAAGCGGCGC
TGCTCGCCCACGAGCGGCAAAGGCACCGAAACGGCGCAATCGCAGCGCAA
AGCTGCAGCAGCCGCAAAGAAAGCTGCCCGCCAACGAGAAACCGTCGCTA
AGGCGAAAGAACTTCAGTCAAAAAAATGTTTTTTTTACCTGAAGTTATCT
CGCCTTAGCGGCGGTTTCTCGTCGGCGGGCAGCTTTCTTTGCTGCCGCTG
CAGCTTTTCGCTGCCGTTGCGCCGCGTTTGCCGCTCCGCTCGTGGGCGAG
CAGCGCCGCTTGTTTTGCCTTTGCGGCACTTTTTCTCCGCTCGCGCTGTT
GCCTCAGAAGTATGGCATCGCGTTTTTTTTATCCGCCGCTTGCTTTTTCG
CCAAGATAGCGGTCCGACGAGGGGATAAAGCTTGATGGGTCCGATATTGT
TGGGCCGCTGCAACACCGCCGCTGCAACACCCCCTGCGGGCGGGAGTGGC
CGAGGCAGTTGCCCCGTTTGCTTCAGTCGGCAAAGCTGCTGACGTCCTTG
TAGGCGATGCTGTTTGGCCTTTTCTGGCAAGACGCTCTTGAGCCTCCCGA
CTCTCCCGCAATTTTGCCTGAGAGGCTCAGGATAGAGTATATCGGCAACA
TTGACGTAGTTTTTTCATGGAGAAGTGAGGAGCAGATAACCCTGTGGCCA
CAAAGGATCTTCCCACCTCTTCCCGGTTCACGCCTTACACTACTAGTTTT
CATCGCGATGCAAGTTCAGCACTCTTACAACTCGTCAACCAGTGGTTGAA
TTTTACCTACTCACGTTCTCACGCTTTCACCGCTACGGAAGCAAGAATTA
AAATCCTGATTTAGCCAAGAATCGAACTCACGACCTCCGCACTTTTAATA
GAAGGTGTGCAGGTTACCTTCTAGACCACTCGATATTGCAAGTGCTTACT
GAAATGTCGGGGGGAGAAATTCACCGTTACATATCGCCGGTACTTCCAAC
ATGCCCACTTCATACCAATAGTGGGTGTGGGAAAGagaggcgaatattAA
TTGGTCCATGGTGACCTGCCAGGGCAGCATTCGTTCGGAACTACCTTGAG
GTTACTGGCCCTCGGCGGACTCTCGGCAGTGAACGCCATCGGTACGCAAC
TGCGTGACCCGATAAACTCGGAACTGACCCGATGACGTTTGAATGTTTAA
AATAAATATATGGACGCCGCCGCGGAACTCGGGAGAAATCCCGTGAGTAA
GCACCAGATTCAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGGG
ACGGCCGAGCCCGTCTCGCGAGACCAAATTCTCAGGCGCGAATCGTGGAC
AGGGGAATACTGATTTTACCTGTTCAGCTGACCACGAGCAGGGTTGGCAA
CCTTTCGGTTGATCCATACTATTGCTATATGTGTGACCATACATACATAC
ATACATACATATATTTTTTGATTGGATTTTCACATAAGCTGGCGTCATAA
TCCAGCCCGTGATCCCAAGGTAGAAAAACACCATCCGGAACAAAAAGGTA
CAACGTACGCAGCCGGTCGCCCCGGTAGCTCAGAAGTAACCTCGTAACCT
TCTGACACGTTGGGACGTGGGTTCGAATCCCGGTGAACGGGATTTTTTCT
CACTGAATAAAAAAAAATGCCCAACAAGTTGAGAATGAATAAATTGTTAG
TACACAAAATTCACTTCTCGCGAGAAAAATTATGGCACGCACCGCAGAAG
GAAGGTGGATGAGAAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCT
GGTACGTCCAAGGAACTTGATGTCCAGATTAAATTGGAAAACACACACAC
ACACACACACACACACACGCGCGCGCGTAATAAGTATCATTGATCCCCCC
TCGGGAGGATCAATGCGAGTGGCATAGAATGACTAGGATGGCAGGGCCGG
ATTGCGCGGTTATGTGCAATTTAATAAACACACACACACACACACACACC
CTCGGGAGGATCAATGCGAGTGGCATAGAATGACTAGGATGACAGGGCCG
GATTGCGTGGTTATGTGCAATTTAATAAGTACACACACACACACACACAC
ACACATCAAAAAGGAAACGGCAATGTTACATAATACTCGTGAAAAGCGAC
ATCCCCGAAGAAACAAAAAAATAAACAAATCAAAAGAGGATACATACAAC
TGTAGTTGTTAGCTAACGTCGTACAGCTGTCAGGGCGCATGCATATCGAA
GAACGATTGAACAAAGGGCCGAAGCTTCAAAAAAAGCAATAGGAGAAAGC
TGAAAACGAAAAAAAAAGTTTACCAGACAAAAAAAATATGGCAACGGCAA
ACAAAACAAAAATCCCGCAGAATACAAGTTCGCGCCATTTGTGGCTAATC
AACTATGGCGAGCGAACCAGCACACGAGCCCGCTTGCTTTGGGCATACCA
CCAATACATGAATACTGCATGCCGTAGTCCAGCCCTGACTTTCTCAGCAG
CGATCCAGCCGCCGAACAAACGCATCTCAGCGACGCGCTTCCAAAACCGT
GGATCATATTCCCATCACACTCAATGGCAGGAGGATCGTTGGAGATGTCG
CAGCCTGACGATGGCGCTAGAGGAGACTCCGCGCCCGCGAGCCGGAGTGC
CGCGCTCAAGCGCAAAAAGTTCTTCCATTGCTATTTGCTGCAGTCTCAGG
ACCCCAAGCACCCGAGATCGACGTATATTGGTTTCACCGTGGACCCTGGC
AGACGAGTTCGCCAGCACAAGTGAGTCGTTCAAAGATTGGGGGGGGGGCA
GGGATGTAACAAATCTGTCCCCGGTTTGGGAAAGGACGGCACGAAAATAG
CCCCCCCGGGGGACTCGGTTGACCCACCCCCAGGTGGCATGAATTCAATT
CGAGGCAAGCTTGCCGACCATGTAGGAGATCATGTAGTTCTATCTCCGGA
AAGGGTTGTTTTGGTCCCATCGCCGGGGAAAGAATCGTCGTATCCCCCCC
CCAATCGTTGGAATACCCAAGTGAGCAAGTGAGGTGATCCCGCTTCCTGA
CGATGGATGGCATGGCATGTTACAGCGCTTCTTGACGCAGCAGAAATGCT
CATTTTAAATTTTCTTATGTCACCTCCTCCTGTATTTCTGAAGCGCGTCG
AGGCATGGATGCGTACAGTGCCGGAATCGTAGTCCTGTGTCGGAATCGTA
GTCCTGTGTCACCCCTGTAATGTttttaatgcggctacggagtgccactg
gcgagGTTGTCCCCCGGGGGGCGAAGCCAAGCATGAAACAAACATCCATC
CGGGTTTACTGGAACACCCTGCAAGTTTTTTCATTCTTGTCGCTACCGGG
GATTGAACCCGCGACGTATCTTTTGTTAGTTGTTGGACAAGCATTGAGAT
ACTGCCGTGCGTGGCGAGCGCGGTCCCCGGAGATAGATAGATGACTGTCG
CCACCGGAAAAAGAGGTCAGAGAGCCCAAGTCATATATTTTGTAAGTCAG
AAGTGCTAAACCATTAACCTACTCAATCATGTGACTCAGGAGTCCGATGG
TTTGGCCGACAACTAACACACCCAAGCTCTGAAGTTTCTCGTAAGCTTCC
TGCCGTGCGATCCATAACGCTCTTACCTATTCTGACCGCAATCGTGGCGG
CGGCAACTCTCGAACCTTTGTCGTTTCTTACAGCGGAGGCATTGCTGGCG
GAGCTTTCCGGGTGAGTTTGATGCCTCAATAGCACATTGATGTCTGCAGT
AGTAATATTTATATGATACTGTACATGAAATCCACTTGCTGAGGTGGTGC
TTAAGGTCGATGTAGCCATTTGTGTCCCTAATTGTCTCTTGTTAATATAA
TCGAAACATGTCGTTCCCGTGCCCTGACTTCATACTTTACGCGTCCCGAC
CAGCGAGCAATGTTATTTGTGCTATTAAAATAGGGGTACTTTGTAAGTGC
GGGACAGGGCGCACACACTTGGATTGTTATGCCCCACGTGCCCCACCTCA
TACTCTTTTACCACCTAAAAGCGACATTCCGTACTAAAAGTCCGTCCTTG
TCGGGTGTGTATTAGACAAAGCACAAGCGGCCTTGGGATATGGTGGCCAT
AGTGCACGGCTTCCCTTCCAAGTCGTCGGCACTCCAGTTCGAGGCGGCGT
GGCAATATCCCCAGCGAGATCGTCGCATCAAGGTCAAAGTTTGCGATCTG
CCCGTGGACGCGCGCCGTACTGTAGGAGTGATGGGCAAGCTCCGTCTGTG
CAAGGCGATGCTCTGTCTCGACCCTTGGGCAAGGTGGGCGATGCAGCCAG
ACCTAGATCGACTTCAGTCGGATTAGAGGTTCTCAAAATAACTGTAATGA
AAGCACACAGGGGATTTTTAGGATTCGAGTTTTTTTCAGTTAAGCCTCCC
CCACCCTCGACATGTGTGGACAAATGGTCTATAGTATATAGTCAATAGAC
TACAGTTTGGTCATGAGTCACCATCGAGAAATTTACTCGCTTCCGTTGCA
AAGCTTTACTAATCACAAATGTTTTGCCCCCCACATCCAAACTCTCCCCA
AGGTACGGTTTAGGGATACGATTCTTGAGGCAGGATTTTGCAAGGACTTA
CGGCGCGCTGATGTTACCGCAGCCTCTGCCGCCCGCGGGAGCACCTTACA
CCGAGGTCACCATCGGCGGTCGCGAGGCTTTGCCCGTGTACGCTTCACTC
ACAGAGTCGAAGAGCGACGGCTTCGAGTCATTACGAGCGCCGAACGCCAA
ATGCGGCTTGTGCTGTAGATTTCTGAATCGGGGGACGATGGTGCTGTGCT
GTCGAGGCTGCGGGGTTCCGGCACACGTTCGATGCCTCGCGGCCAGGATG
CTGCAAGAGTCAGGCAACATGTCAGAGATGATTCCCTCGGAGGGTTCCTG
CCCGGCGCCCTCGTGTGGCCGACATCTCCTGTGGTCTCAGCTGGTTAGAG
ACGTATGTGCTTACCAGCCCCCGATGTCGACTTCGAACGACGAGAACCAT
GAAGATCACAATGCTGGAGGAAACAATGTCGACTGTTTCGGGACGAGGTC
TGGTGATAGAAACCCGAAGGTTCCCCTGGTGTGGCGGGTGGACGATAGCA
GCGATGATGACGATGGTAGCGATAACGATAGTAATGCCTCCGTGGACGAG
GAGGCAAACGCACGGTTCACCGACAGCGAAGAGAGAGGCCGCGGGGCCTG
CAGCGGCAGCGACGTATCGAGTATTGCATTTGTCGGAGTAACACAGTCTA
CGGAACAAGAGGCAGATGATGATGATGATGAGAGCTTCTGGAGGCTCAGT
GGAAGCCCCGACTGTACTCAACCAACTGCGATAGACAAGGAAACCAAACA
TTGGGATCCACAGCCGATCCGTGGTCATCCGGCGCAATCCACGGGGAGTA
TCGCTGCGTGTAGTCTGCCACGGACGACAACGGCCGCTTCGAGGGATGTG
GAGAGATTGTGCGCCAGCGACGGTGTACGAGTGTCGCCGTCGCTAACCGG
AACGAAGAGTGGTTGTACTGGCGGAAGGAAAGGAGAGGAAGGATCGTACT
TGAGCCAGGAAGGTAGTGAAGAGGAGGATTCGTCCCCGATTGTCTTGAAG
CTGTCCCTCGCAGAACGTCTTCGTCTGAAGAGATCTGTCCTTTTTTAGGG
GCATGAACCGTCTCGTTGCTAGCGCTATAAATAGGCAGCCAGTTGAGTGA
AAACGAAAGCTAGAGGGAAAACGTGCTCGTGTTCAGGGGGTAGATGTTTC
GCTTTTCCACAATGAAATTCTGCAAGGGGGTTTGGCGAGGATAAATGTTT
CTTGTAAATGGACGAAAGCTTCCTCCGCAAATCTCGCATGCAACATGTCG
AACCTGTGTGCATCACCACTACCTTCGTAAAAAACTAAAGGAGACACCTC
GGCCTTACAAAATATTCCTATAATGGATAGAAATAGAAAAAAAAGTCATT
TGAGGCCTACGCCTAACCCTGGAGCTCATGCCGCGACCGCTTCTACCGGC
TTGTGCTCCACCCATCTCATCTCCTCGCCCCTCAATCCGTTCACGAATGC
CTTGGCCCCCATGACGTTTTTATTCAAGGGCTGAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1478:198963..212497+

>mRNA_F-serratus_M_contig1478.3304.1 ID=mRNA_F-serratus_M_contig1478.3304.1|Name=mRNA_F-serratus_M_contig1478.3304.1|organism=Fucus serratus male|type=CDS|length=3036bp|location=Sequence derived from alignment at F-serratus_M_contig1478:198963..212497+ (Fucus serratus male)
ATGTCGCAGCCTGACGATGGCGCTAGAGGAGACTCCGCGCCCGCGAGCCG
GAGTGCCGCGCTCAAGCGCAAAAAGTTCTTCCATTGCTATTTGCTGCAGT
CTCAGGACCCCAAGCACCCGAGATCGACGTATATTGGTTTCACCGTGGAC
CCTGGCAGACGAGTTCGCCAGCACAAATGTCGCAGCCTGACGATGGCGCT
AGAGGAGACTCCGCGCCCGCGAGCCGGAGTGCCGCGCTCAAGCGCAAAAA
GTTCTTCCATTGCTATTTGCTGCAGTCTCAGGACCCCAAGCACCCGAGAT
CGACGTATATTGGTTTCACCGTGGACCCTGGCAGACGAGTTCGCCAGCAC
AACGGAGGCATTGCTGGCGGAGCTTTCCGGCGGAGGCATTGCTGGCGGAG
CTTTCCGGACAAAGCACAAGCGGCCTTGGGATATGGTGGCCATAGTGCAC
GGCTTCCCTTCCAAGTCGTCGGCACTCCAGTTCGAGGCGGCGTGGCAATA
TCCCCAGCGAGATCGTCGCATCAAGGTCAAAGTTTGCGATCTGCCCGTGG
ACGCGCGCCGTACTGTAGGAGTGATGGGCAAGCTCCGTCTGTGCAAGGCG
ATGCTCTGTCTCGACCCTTGGGCAAGACAAAGCACAAGCGGCCTTGGGAT
ATGGTGGCCATAGTGCACGGCTTCCCTTCCAAGTCGTCGGCACTCCAGTT
CGAGGCGGCGTGGCAATATCCCCAGCGAGATCGTCGCATCAAGGTCAAAG
TTTGCGATCTGCCCGTGGACGCGCGCCGTACTGTAGGAGTGATGGGCAAG
CTCCGTCTGTGCAAGGCGATGCTCTGTCTCGACCCTTGGGCAAGGTACGG
TTTAGGGATACGATTCTTGAGGCAGGATTTTGCAAGGACTTACGGCGCGC
TGATGTTACCGCAGCCTCTGCCGCCCGCGGGAGCACCTTACACCGAGGTC
ACCATCGGCGGTCGCGAGGCTTTGCCCGTGTACGCTTCACTCACAGAGTC
GAAGAGCGACGGCTTCGAGTCATTACGAGCGCCGAACGCCAAATGCGGCT
TGTGCTGTAGATTTCTGAATCGGGGGACGATGGTGCTGTGCTGTCGAGGC
TGCGGGGTTCCGGCACACGTTCGATGCCTCGCGGCCAGGATGCTGCAAGA
GTCAGGCAACATGTCAGAGATGATTCCCTCGGAGGGTTCCTGCCCGGCGC
CCTCGTGTGGCCGACATCTCCTGTGGTCTCAGCTGGTTAGAGACGTATGT
GCTTACCAGCCCCCGATGTCGACTTCGAACGACGAGAACCATGAAGATCA
CAATGCTGGAGGAAACAATGTCGACTGTTTCGGGACGAGGTCTGGTGATA
GAAACCCGAAGGTTCCCCTGGTGTGGCGGGTGGACGATAGCAGCGATGAT
GACGATGGTAGCGATAACGATAGTAATGCCTCCGTGGACGAGGAGGCAAA
CGCACGGTTCACCGACAGCGAAGAGAGAGGCCGCGGGGCCTGCAGCGGCA
GCGACGTATCGAGTATTGCATTTGTCGGAGTAACACAGTCTACGGAACAA
GAGGCAGATGATGATGATGATGAGAGCTTCTGGAGGCTCAGTGGAAGCCC
CGACTGTACTCAACCAACTGCGATAGACAAGGAAACCAAACATTGGGATC
CACAGCCGATCCGTGGTCATCCGGCGCAATCCACGGGGAGTATCGCTGCG
TGTAGTCTGCCACGGACGACAACGGCCGCTTCGAGGGATGTGGAGAGATT
GTGCGCCAGCGACGGTGTACGAGTGTCGCCGTCGCTAACCGGAACGAAGA
GTGGTTGTACTGGCGGAAGGAAAGGAGAGGAAGGATCGTACTTGAGCCAG
GAAGGTAGTGAAGAGGAGGATTCGTCCCCGATTGTCTTGAAGCTGTCCCT
CGCAGAACGTCTTCGTCTGAAGAGATCTGTCCTTTTTTAGGTACGGTTTA
GGGATACGATTCTTGAGGCAGGATTTTGCAAGGACTTACGGCGCGCTGAT
GTTACCGCAGCCTCTGCCGCCCGCGGGAGCACCTTACACCGAGGTCACCA
TCGGCGGTCGCGAGGCTTTGCCCGTGTACGCTTCACTCACAGAGTCGAAG
AGCGACGGCTTCGAGTCATTACGAGCGCCGAACGCCAAATGCGGCTTGTG
CTGTAGATTTCTGAATCGGGGGACGATGGTGCTGTGCTGTCGAGGCTGCG
GGGTTCCGGCACACGTTCGATGCCTCGCGGCCAGGATGCTGCAAGAGTCA
GGCAACATGTCAGAGATGATTCCCTCGGAGGGTTCCTGCCCGGCGCCCTC
GTGTGGCCGACATCTCCTGTGGTCTCAGCTGGTTAGAGACGTATGTGCTT
ACCAGCCCCCGATGTCGACTTCGAACGACGAGAACCATGAAGATCACAAT
GCTGGAGGAAACAATGTCGACTGTTTCGGGACGAGGTCTGGTGATAGAAA
CCCGAAGGTTCCCCTGGTGTGGCGGGTGGACGATAGCAGCGATGATGACG
ATGGTAGCGATAACGATAGTAATGCCTCCGTGGACGAGGAGGCAAACGCA
CGGTTCACCGACAGCGAAGAGAGAGGCCGCGGGGCCTGCAGCGGCAGCGA
CGTATCGAGTATTGCATTTGTCGGAGTAACACAGTCTACGGAACAAGAGG
CAGATGATGATGATGATGAGAGCTTCTGGAGGCTCAGTGGAAGCCCCGAC
TGTACTCAACCAACTGCGATAGACAAGGAAACCAAACATTGGGATCCACA
GCCGATCCGTGGTCATCCGGCGCAATCCACGGGGAGTATCGCTGCGTGTA
GTCTGCCACGGACGACAACGGCCGCTTCGAGGGATGTGGAGAGATTGTGC
GCCAGCGACGGTGTACGAGTGTCGCCGTCGCTAACCGGAACGAAGAGTGG
TTGTACTGGCGGAAGGAAAGGAGAGGAAGGATCGTACTTGAGCCAGGAAG
GTAGTGAAGAGGAGGATTCGTCCCCGATTGTCTTGAAGCTGTCCCTCGCA
GAACGTCTTCGTCTGAAGAGATCTGTCCTTTTTTAG
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