prot_F-serratus_M_contig1472.3284.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1472.3284.1
Unique Nameprot_F-serratus_M_contig1472.3284.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length183
Homology
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BLAST of mRNA_F-serratus_M_contig1472.3284.1 vs. uniprot
Match: D8LHW2_ECTSI (HP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHW2_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.520e-15
Identity = 50/101 (49.50%), Postives = 59/101 (58.42%), Query Frame = 0 
Query:   83 GDGCCFRSSALGKALVRVGAEQAQKSSSALGTRGGEGTTPYRYRRLVGVGGC-WPPDVQSAHRERWLAPAEFEAVFEMSFKAFAGLPWWKQRTLKQEVCLF 182
            GDG   R+SA    L+RVG+          G   G GTTP+RYRRL+G+    WP  V  A RE WL P EFEAVF MSF  F  LP WK+  LK+E+ LF
Sbjct:  240 GDGNPARASAE-PPLLRVGS----------GGGDGGGTTPFRYRRLMGLSRRGWPSCVNPARREEWLCPVEFEAVFAMSFSEFRALPSWKRVALKRELLLF 329
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BLAST of mRNA_F-serratus_M_contig1472.3284.1 vs. uniprot
Match: A0A6H5L198_9PHAE (HP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L198_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 3.760e-15
Identity = 49/101 (48.51%), Postives = 58/101 (57.43%), Query Frame = 0 
Query:   83 GDGCCFRSSALGKALVRVGAEQAQKSSSALGTRGGEGTTPYRYRRLVGVGGC-WPPDVQSAHRERWLAPAEFEAVFEMSFKAFAGLPWWKQRTLKQEVCLF 182
            GDG   R+SA     +RVG+          G   G GTTP+RYRRL+G+    WP  V  A RE WL P EFEAVF MSF  F  LP WK+  LK+E+ LF
Sbjct:  598 GDGTSSRASAE-PPFLRVGS----------GGGDGGGTTPFRYRRLMGLSRRGWPSCVNPARREEWLCPVEFEAVFAMSFSEFRALPSWKRVALKRELLLF 687
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1472.3284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHW2_ECTSI1.520e-1549.50HP domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5L198_9PHAE3.760e-1548.51HP domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003128Villin headpieceSMARTSM00153VHP_1coord: 147..182
e-value: 7.4E-8
score: 42.1
IPR003128Villin headpiecePFAMPF02209VHPcoord: 148..182
e-value: 6.5E-11
score: 42.1
IPR003128Villin headpiecePROSITEPS51089HPcoord: 117..182
score: 14.225
IPR036886Villin headpiece domain superfamilyGENE3D1.10.950.10coord: 120..182
e-value: 4.2E-14
score: 54.0
IPR036886Villin headpiece domain superfamilySUPERFAMILY47050VHP, Villin headpiece domaincoord: 119..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1472contigF-serratus_M_contig1472:221551..222099 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1472.3284.1mRNA_F-serratus_M_contig1472.3284.1Fucus serratus malemRNAF-serratus_M_contig1472 221415..223483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1472.3284.1 ID=prot_F-serratus_M_contig1472.3284.1|Name=mRNA_F-serratus_M_contig1472.3284.1|organism=Fucus serratus male|type=polypeptide|length=183bp
MTSDFYLGSFAGVKHAPFGGKSGACRRPGVEGTELLVEVFGTDDPPVGLA
DTSAIVGPAARIAALPPAELARLVNIERRASDGDGCCFRSSALGKALVRV
GAEQAQKSSSALGTRGGEGTTPYRYRRLVGVGGCWPPDVQSAHRERWLAP
AEFEAVFEMSFKAFAGLPWWKQRTLKQEVCLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003128Villin_headpiece
IPR036886Villin_headpiece_dom_sf