prot_F-serratus_M_contig147.3276.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig147.3276.1
Unique Nameprot_F-serratus_M_contig147.3276.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length109
Homology
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BLAST of mRNA_F-serratus_M_contig147.3276.1 vs. uniprot
Match: D7FT16_ECTSI (N_BRCA1_IG domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT16_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.090e-20
Identity = 53/84 (63.10%), Postives = 60/84 (71.43%), Query Frame = 0 
Query:    1 MVLKIAPTKVKITRVDGTSELRRLGFSFDESL--VSGGPLGQQIQSEGYHLGLVRFLLRSLSDLCPDLPVGAFSSNAVFTVKDE 82
            MVL  AP KVKIT+ DGTSELRRL F +D+S    S G L  + Q +GYHL L +FLLRSL  L PDLP+G FS  AVFTVKDE
Sbjct:    1 MVLTTAPVKVKITKDDGTSELRRLAFGYDDSFQQASYGGLFDE-QRQGYHLSLCKFLLRSLGGLYPDLPLGKFSELAVFTVKDE 83
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BLAST of mRNA_F-serratus_M_contig147.3276.1 vs. uniprot
Match: A0A6H5JI15_9PHAE (ZZ-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI15_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.740e-17
Identity = 50/84 (59.52%), Postives = 56/84 (66.67%), Query Frame = 0 
Query:    1 MVLKIAPTKVKITRVDGTSELRRLGFSFDESLV---SGGPLGQQIQSEGYHLGLVRFLLRSLSDLCPDLPVGAFSSNAVFTVKD 81
            MVL  AP KVKIT+ D TSELRRL F +D+S     SGG   +Q Q  GYHL L +FLLRSL  L P+LPVG FS  AVFT  D
Sbjct:    1 MVLTTAPVKVKITKDDETSELRRLAFGYDDSFQQASSGGLFDEQRQ--GYHLSLCKFLLRSLGGLYPNLPVGKFSELAVFTDGD 82
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig147.3276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT16_ECTSI1.090e-2063.10N_BRCA1_IG domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JI15_9PHAE3.740e-1759.52ZZ-type domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig147contigF-serratus_M_contig147:627806..683361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig147.3276.1mRNA_F-serratus_M_contig147.3276.1Fucus serratus malemRNAF-serratus_M_contig147 627592..683361 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig147.3276.1 ID=prot_F-serratus_M_contig147.3276.1|Name=mRNA_F-serratus_M_contig147.3276.1|organism=Fucus serratus male|type=polypeptide|length=109bp
MVLKIAPTKVKITRVDGTSELRRLGFSFDESLVSGGPLGQQIQSEGYHLG
LVRFLLRSLSDLCPDLPVGAFSSNAVFTVKDEGLRPGTCCWRHQQASRAE
RGCQEKVR*
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