prot_F-serratus_M_contig1465.3266.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1465.3266.1
Unique Name	prot_F-serratus_M_contig1465.3266.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	136

Homology

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BLAST of mRNA_F-serratus_M_contig1465.3266.1 vs. uniprot
Match: D8LT47_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT47_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 3.520e-62
Identity = 105/135 (77.78%), Postives = 111/135 (82.22%), Query Frame = 0

Query:    1 MDYESWARQRAMHLAVSDVIASAELRPPLPHGVVAGTAVPPAAPLPGLSGISAKICTVLLFLFVAAWPFAPILVHWKPWASQPTLAFLLLLLTLAWVLVARSHSIFAALLSSWLTLALTGLTAWEYTTEQVRLHQ 135
            MD + W R RA  +A  D   +AELRPP    +V G A PP   LPGLS +SAK+CTVLLFLFVAAWPFAPILVHWKPW SQ TLAFLLLLLTLAWVLVARSHSIFAALLSSWLTLALTGLTAWEYTTEQVRLHQ
Sbjct:    1 MDLDGWVRHRADVMAAYDTAPAAELRPP---PIVMGGASPP---LPGLSRLSAKVCTVLLFLFVAAWPFAPILVHWKPWGSQATLAFLLLLLTLAWVLVARSHSIFAALLSSWLTLALTGLTAWEYTTEQVRLHQ 129

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BLAST of mRNA_F-serratus_M_contig1465.3266.1 vs. uniprot
Match: A0A836CLD1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD1_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 9.850e-25
Identity = 45/80 (56.25%), Postives = 61/80 (76.25%), Query Frame = 0

Query:   54 KICTVLLFLFVAAWPFAPILVHWKPWASQPTLAFLLLLLTLAWVLVARSHSIFAALLSSWLTLALTGLTAWEYTTEQVRL 133
            ++     FLFVA WP  P+L+ W+PW  +  +AF+LLL  LAWVLV +S S+F+A++SSWLTLALTGLT +EYTT Q+R+
Sbjct:    6 RLAVFFTFLFVATWPLFPVLIQWQPWPLRSAVAFVLLLSVLAWVLVVKSGSLFSAIVSSWLTLALTGLTCYEYTTSQMRM 85

[Close]

BLAST of mRNA_F-serratus_M_contig1465.3266.1 vs. uniprot
Match: A0A836CR96_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR96_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.920e-20
Identity = 44/86 (51.16%), Postives = 58/86 (67.44%), Query Frame = 0

Query:   47 GLSGISAKICTVLLFLFVAAWPFAPILVHWKPWASQPTLAFLLLLLTLAWVLVARSHSIFAALLSSWLTLALTGLTAWEYTTEQVR 132
            GL    +++   L+FL++A WP  P+LV W+PW    TL+FLLLL  LAWV+V  S  + AA+LSS+LTL LTGLT +EY   Q R
Sbjct:   42 GLDPFLSQLYIFLIFLYIATWPLLPVLVQWQPWPLTATLSFLLLLCALAWVVVVESRGLPAAVLSSFLTLLLTGLTCYEYRASQAR 127

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1465.3266.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1465.3266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LT47_ECTSI	3.520e-62	77.78	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CLD1_9STRA	9.850e-25	56.25	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A836CR96_9STRA	3.920e-20	51.16	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 75..79
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 125..135
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 100..105
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 55..74
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 106..124
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 80..99
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..54
None	No IPR available	TMHMM	TMhelix		coord: 55..74
None	No IPR available	TMHMM	TMhelix		coord: 78..100
None	No IPR available	TMHMM	TMhelix		coord: 105..127

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1465	contig	F-serratus_M_contig1465:116660..117354 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1465.3266.1	mRNA_F-serratus_M_contig1465.3266.1	Fucus serratus male	mRNA	F-serratus_M_contig1465 116631..119740 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1465.3266.1 ID=prot_F-serratus_M_contig1465.3266.1|Name=mRNA_F-serratus_M_contig1465.3266.1|organism=Fucus serratus male|type=polypeptide|length=136bp
MDYESWARQRAMHLAVSDVIASAELRPPLPHGVVAGTAVPPAAPLPGLSG
ISAKICTVLLFLFVAAWPFAPILVHWKPWASQPTLAFLLLLLTLAWVLVA
RSHSIFAALLSSWLTLALTGLTAWEYTTEQVRLHQ*