mRNA_F-serratus_M_contig1465.3264.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1465.3264.1 vs. uniprot
Match: A0A6H5KXU5_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU5_9PHAE) HSP 1 Score: 419 bits (1076), Expect = 4.500e-131 Identity = 239/505 (47.33%), Postives = 318/505 (62.97%), Query Frame = 1
Query: 85 RVSIPAAAPRIQPWYVERTFLIAEACARLGIRSL-------DRKPRLVGLSGPSGAGKSTVASMVIAREDVHAFFHGGVLWLPIGRGAKDRIPALTLRLAGMVYEDVLEKACRPPRKADVGVEPEDGVDYIREVLGKLGRRLLVVADDVWEEEVLQEMQKIGAWVLYTSQADGLLGDAP-LRLDQLRTGEAEAVLRESAEIEENENLPETAHEVIRQSGFLVMDLAFVGRWGRVRGKSGWEEWQTILDRI-EQARDGGEGGDDNSGGERLPWRTAVLRVGLGELALDASVNLELYLSLAVLPDGLEFGIEEVSALLHDDDSSCSPRALEDAATVASTLERWSILTLEDG-GRYRVHDRHAEFIRERVSKFPATRDNAARRWQGHVSTVDALLTWSGAELADIWRALARLNGATVIPWPYGSALEA---KASPDSRDALRRLAHLYYLTEDYEGAYKANTVLLEMEEEDLGRDHPDVARALHNLAVCASEAGRTEEAESLYERSLA 1560
RV+IP+ AP I+ WYVER + A+ C LGI + + +PR+VGL+GP GAGKSTVASMV+ + DV AFF G VLWL +G+GAKDR+P L LA V E VL+K R PR+A VG+ EDG YIRE GK R LVVADDVW+ EVL E+++ GAWV+YT++ L + P +RL+++ EAE +LR +A++ E LP A+E++R+ F V+DLA VGRWG++RG+S W+ LD I E R GG+GG + LPWR AVLR GLG LA D ELY +LA+LP GL F E LL+ DD S S AL+ A V TLER SILTLE+ G Y VH+ H +F+ +R TRD A RW+ ++S+V AL T+S A L +W LA++ G + PY +AL A + + +ALRR A ++ D+ A+ + LL ++E+ G DHPDVA+ LHNL +CA E GR +E E R+LA
Sbjct: 172 RVNIPSGAPSIRDWYVERVKVEAQICHHLGIGTSNGIPSFPEEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPTLMFELAKTVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRKAELFPETPAIRLEEVLEEEAEMMLRRAADLGEKTRLPPAAYELMRRCDFSVLDLALVGRWGKIRGRSCERAWRAALDSIIETQRAGGDGG------QLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSES--ALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRQYISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRSPYNAALSAIMDDSEGELLEALRRAAEFHFCRGDWSEAFDKYSELLLIKEQTAGPDHPDVAKILHNLGMCACEVGREKETEGYLRRALA 668
BLAST of mRNA_F-serratus_M_contig1465.3264.1 vs. uniprot
Match: D7G5Y4_ECTSI (NB-ARC and TPR containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y4_ECTSI) HSP 1 Score: 413 bits (1061), Expect = 5.570e-131 Identity = 237/508 (46.65%), Postives = 316/508 (62.20%), Query Frame = 1
Query: 76 RECRVSIPAAAPRIQPWYVERTFLIAEACARLGIRSLD-------RKPRLVGLSGPSGAGKSTVASMVIAREDVHAFFHGGVLWLPIGRGAKDRIPALTLRLAGMVYEDVLEKACRPPRKADVGVEPEDGVDYIREVLGKLGRRLLVVADDVWEEEVLQEMQKIGAWVLYTSQADGLLGDAP-LRLDQLRTGEAEAVLRESAEIEENENLPETAHEVIRQSGFLVMDLAFVGRWGRVRGKSGWEEWQTILDRI-EQARDGGEGGDDNSGGERLPWRTAVLRVGLGELALDASVNLELYLSLAVLPDGLEFGIEEVSALLHDDDSSCSPRALEDAATVASTLERWSILTLEDG-GRYRVHDRHAEFIRERVSKFPATRDNAARRWQGHVSTVDALLTWSGAELADIWRALARLNGATVIPWPYGSALEA---KASPDSRDALRRLAHLYYLTEDYEGAYKANTVLLEMEEEDLGRDHPDVARALHNLAVCASEAGRTEEAESLYERSLA 1560
R RV+IP+ AP I+ WYVER + + C LGI + + +PR+VGL+GP GAGKSTVASMV+ + DV AFF G VLWL +G+GAKDR+PAL LA V E VL+K R PR+A VG+ EDG YIRE GK R LVVADDVW+ EVL E+++ GAWV+YT++ L P +RL+++ EAE +LR +A++ E LP A+E++++ F V+DLA VGRWG +R +S W+ LD I E R GG+GG + LPWR AVLR GLG LA D ELY +LA+LP GL F E LL+ DD S S AL+ A V TLER SILTLE+ G Y VH+ H +F+ +R TRD A RW+ ++S+V AL T+S A L +W L+++ G + PY +AL A + + +ALRR A ++ ED+ A+ + LL ++E+ G HPDVA+ LHNL +CA E GR +E E R+LA
Sbjct: 3 RPGRVNIPSGAPSIRDWYVERVGVATQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPALMFELANRVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLGELRRAGAWVIYTTRKTELFPGTPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCESAWRAALDSIIETQRAGGDGG------QLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSES--ALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLSKVEGEGFVRSPYNAALNAIMDDSEGELLEALRRAAEFHFCREDWSEAFDKYSNLLLIKEQTAGPHHPDVAKILHNLGMCACEVGREKETEGYLRRALA 502
BLAST of mRNA_F-serratus_M_contig1465.3264.1 vs. uniprot
Match: A0A6H5KZP3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZP3_9PHAE) HSP 1 Score: 414 bits (1063), Expect = 1.070e-128 Identity = 246/529 (46.50%), Postives = 317/529 (59.92%), Query Frame = 1
Query: 1 PSPCIFPHVPALPFARREVQQTLALRECRVSIPAAAPRIQPWYVERTFLIAEACARLGIRS----LDRKPRLVGLSGPSGAGKSTVASMVIAREDVHAFFHGGVLWLPIGRGAKDRIPALTLRLAGMVYEDVLEKACRPPRKADVGVEPEDGVDYIREVLGKLGRRLLVVADDVWEEEVLQEMQKIGAWVLYTSQADGLLGDAPL-RLDQLRTGEAEAVLRESAEIEENENLPETAHEVIRQSGFLVMDLAFVGRWGRVRGKSGWEEWQTILDRIEQARDGGEGGDDNSGGERLPWRTAVLRVGLGELALDASVNLELYLSLAVLPDGLEFGIEEVSALLHDDDSSCSPRALEDAATVASTLERWSILTLEDGGRYRVHDRHAEFIRERVSKFPATRDNAARRWQGHVSTVDALLTWSGAELADIWRALARLNGATVIPWPYGSALEA--KASPDSRDALRRLAHLYYLTEDYEGAYKANTVLLEMEEEDL-GRDHPDVARALHNLAVCASEAGRTEEAESLYERSLAI 1563
P P +F P P ++ Q + V++P+ APRI W+VER +AEAC LGI S PR+VG+SGP G+GKST+ASMVIAR+DV +F+ GVLWLP+G GAK +P L L LA MVYE VL KACRPPR A VGV+PEDG YI EV+ + R LVVADD+ E EVL+E++ G WVLYTS+ D LL APL RLD + E VLR +A + ++ LP AHE++++ + M LAF GRWG VRGKS E W+ L I +A+ G G L WR A+LR+G EL D+ ELYLSLA+LP GL F + + LL+ D+ CS LE A TLER SILTLE G+YRVH+ HA+F+RE R+ A RW+G+ S + AL T+S A L IW +A+L G + PY +AL+ +SP AL+R A ++ ED AY L +EE G VA+ LH L +C +AGR EEAE Y+R+L I
Sbjct: 93 PDPGMFDRGPQTPDFQQGFSQDESQSAGEVAVPSGAPRIHEWHVERKEAVAEACDSLGIGSGKSEFFEMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPVGEGAKHCLPELMLHLARMVYETVLRKACRPPRLAGVGVDPEDGAGYIHEVVNESNHRFLVVADDIREPEVLEELKWAGVWVLYTSRRDDLLTGAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQRCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRG------GNGRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDE--CSADELEAAGKALETLERLSILTLEVSGKYRVHEVHADFVRECEVANNEEREMALARWRGYASDLRALSTYSSAWLVKIWDVIAQLEGTGPVASPYDAALDRVDPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALTI 613
BLAST of mRNA_F-serratus_M_contig1465.3264.1 vs. uniprot
Match: D8LT49_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT49_ECTSI) HSP 1 Score: 360 bits (925), Expect = 2.780e-105 Identity = 217/520 (41.73%), Postives = 304/520 (58.46%), Query Frame = 1
Query: 97 PAAAPRIQPWYVERTFLIAEACARLGIRSLDR-----KPRLVGLSGPSGAGKSTVASMVIAREDVHAFF-HGGVLWLPIGRGAKDRIPALTLRLAGMVYEDVLEKAC------RPPRKADVGVEPEDGVDYIREVL---------GKLGRRLLVVADDVWEEEVLQEMQKIGAWVLYTSQADGLL-----GDAPLRLDQLRTGEAEAVLRESAEIEENENLPETAHEVIRQSGFLVMDLAFVGRWGRVRGKSGWEEWQTILDRIEQARDGGEGGDDNSGGERLPWRTAVLRVGLGELALDASVNLELYLSLAVLPDGLEFGIEEVSALLHDDDSSCSPRALEDAATVASTLERWSILTLEDGGRYRVHDRHAEFIRERVSKFPATRDNAARRWQGHVSTVDALLTWSGAELADIWRALARLN---GATVIPWPYGSALEAKASPDSR--DALRRLAHLYYLTEDYEGAYKANTVLLEMEEEDLGRDHPDVARALHNLAVCASEAGRTEEAESLYERSLAI 1563
PA AP +Q W+++R ++A C RLG+ R +P +VG++GPSGAGKST+ASM++AR DV F GV+WL +G+GA+DR+ + RLA MV+E + RPPR D+GVEPEDG Y+RE+L G G LLVVADDVWE EVL E++ GA +LYT++++ L G + LR+D++ GEAE +LR +A + + LP+ AH++IR+ G + MD+A+VGRW VRGK+ W +L + A+ + G LPWR+AVLRVG+ L L ELYLSL VLP L F +++V+AL+ D S L+ A +TLE+WS+L +GGRYRVH HA+ + +S+ PA A RW+ VST +A+LTW EL DIW + L GA I PY ++A D+ LRR+A +LT + + A + + LL ED +HPDV ++ L A +GRT EAE + R+LAI
Sbjct: 261 PAEAPLLQDWFIQREPVVAAICDRLGVNDRGRSRASGEPPVVGVAGPSGAGKSTIASMIVARHDVRGHFSQKGVVWLSVGQGARDRLLDVMYRLAVMVHELADSSSSPDDGPFRPPRTPDIGVEPEDGAAYVREILAADEGERSSGGFGE-LLVVADDVWEAEVLAELRNTGASILYTTRSEEDLLAASGGSSVLRVDEVTEGEAEELLRRAAALLDYSKLPDAAHDIIRRGGSVAMDVAYVGRWDIVRGKNDQAAWAAVLAHVIDAQ------NFMKGAALLPWRSAVLRVGVTRLGLADQGTKELYLSLGVLPRNLSFSVDDVTALVSDG----SAEELQAATLAMATLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPAILGPALARWRNRVSTAEAVLTWRTEELVDIWETIWSLEIGEGAEDIGQPYAETVDAMDLSDAGAFQLLRRIAFFQWLTNEPDAACMSWSKLL-ASGEDSAANHPDVHVTMYTLGAHALISGRTPEAEGWFRRTLAI 768
BLAST of mRNA_F-serratus_M_contig1465.3264.1 vs. uniprot
Match: A0A6H5JL31_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL31_9PHAE) HSP 1 Score: 354 bits (908), Expect = 5.130e-105 Identity = 227/514 (44.16%), Postives = 300/514 (58.37%), Query Frame = 1
Query: 58 QQTLALRECRVSIPAAAPRIQPWYVERTFLIAEACARLGIR----SLDRKPRLVGLSGPSGAGKSTVASMVIAREDVHAFFHGGVLWLPIG-RGAKDRIPALTLRLAGMVYEDVLEKACRPPRKADVGVEPEDGVDYIREVLGKLGRRLLVVADDVWEEEVLQEMQKIGAW-VLYTSQADGLLGDAPL-RLDQLRTGEAEAVLRESAEIEENENLPETAHEVIRQSGFLVMDLAFVGRWGRVRGKSGWEEWQTILDRIEQARDGGEGGDDNSGGERLP--WRTAVLRVGLGELALDASVNLELYLSLAVLPDGLEFGIEEVSALLHDDDSSCSPRA-LEDAATVASTLERWSILTLEDGGRYRVHDRHAEFIRERVSKFPATRDNAARRWQGHVSTVDALLTWSGAELADIWRALARLNGATVIPWPYGSALE--AKASPDSRDALRRLAHLYYLTEDYEGAYKANTVLLEMEEEDLGRDHPDVARALHNLAVCASEAGRTEEAESLYERSLAI 1563
Q+ +A V IP APRI+ +VER +I++ C+ LGI + + ++VGL+G G+GKSTVASMVI REDV AFF GGVLWL +G R +DR+ L LAGMVYE V +K CRP RK +G + ED YI+ + + RR LVVADDVW+ EVL E+++ W VLYTS+ LL AP+ LDQL EAE VLR +AE+ ++ LPE A++++R+ + +DL FVGRW R R ++ W+ LD I A+ GEG RLP WR AVL GL ELA + S N ELYL+LAV+P G F + + LL+ D S + E+A + TLERWSI+T GG YRVHD H +FIR + R+ RW+ ++S+V AL+T S L++ W LA G V PY AL A +S D ALR A Y E + A + LL ++E G D VAR LH L +C +GR EEAE +R+L I
Sbjct: 14 QRRVADLASTVRIPTTAPRIRDRFVERGEVISQVCSLLGIEDHTTAYPAEMKVVGLAGAGGSGKSTVASMVIRREDVRAFFPGGVLWLSVGQRAGRDRLLELLTSLAGMVYETVFQKRCRPLRKGVIGTDDEDPAAYIQCLQVERPRRFLVVADDVWQTEVLDELRRASVWGVLYTSRNTDLLPRAPVVLLDQLDREEAEMVLRNAAELAKDACLPEAAYDLMRRCEYAALDLDFVGRWSRTRRRTSELAWRGALDCIVDAQTRGEG--------RLPLSWRAAVLHTGLEELAGENSANRELYLALAVIPRGQPFPPDVAAVLLYGDGRSGEEKEDREEAKNIFETLERWSIITRVGGGWYRVHDEHTDFIRASFAANQHARNTTLIRWRRYMSSVSALVTLSEDWLSEGWNVLAEAQGEPVPSQPYLEALGGLAPSSADRPMALRTAASFYRDREQWMPASDYFSQLLIIQEHTAGVDSVVVARTLHELGLCVYMSGRAEEAELRLKRALRI 519
BLAST of mRNA_F-serratus_M_contig1465.3264.1 vs. uniprot
Match: A0A6H5JI56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI56_9PHAE) HSP 1 Score: 360 bits (923), Expect = 8.820e-105 Identity = 214/521 (41.07%), Postives = 306/521 (58.73%), Query Frame = 1
Query: 97 PAAAPRIQPWYVERTFLIAEACARLGIRS-----LDRKPRLVGLSGPSGAGKSTVASMVIAREDVHAFF-HGGVLWLPIGRGAKDRIPALTLRLAGMVYEDVLEKAC-------RPPRKADVGVEPEDGVDYIREVL---------GKLGRRLLVVADDVWEEEVLQEMQKIGAWVLYTSQADGLL-----GDAPLRLDQLRTGEAEAVLRESAEIEENENLPETAHEVIRQSGFLVMDLAFVGRWGRVRGKSGWEEWQTILDRIEQARDGGEGGDDNSGGERLPWRTAVLRVGLGELALDASVNLELYLSLAVLPDGLEFGIEEVSALLHDDDSSCSPRALEDAATVASTLERWSILTLEDGGRYRVHDRHAEFIRERVSKFPATRDNAARRWQGHVSTVDALLTWSGAELADIWRALARLN---GATVIPWPYGSALEAKASPDSR--DALRRLAHLYYLTEDYEGAYKANTVLLEMEEEDLGRDHPDVARALHNLAVCASEAGRTEEAESLYERSLAI 1563
PA AP +Q W+++R ++A C RLG+ +P +VG++GPSGAGKST+ASM+IAR DV F ++WLP+G+GA+DR+ + RLA MV+E V+ + RPP+ D+GVEPEDG Y+RE+L G G LLVVADD+WE EVL E++ GA +LYT++++ L G LR+D++ GEAE +LR +A++ ++ LP+ AH++IR+ G + MD+A+VGRW VRG + W +L + A+ + G LPWR+AVLRVGL L L ELYLSL VLP L F + +V+AL+ D S L+ A +TLE+WS+L +GGRYRVH HA+ + +S+ PAT +A RW+ VST +A+L W EL DIW+A+ L GA I PY ++A D+ LRR+A ++T + + A + + LL E+ D PDV ++ L A +GRT EAE + R+LAI
Sbjct: 305 PAEAPLLQDWFIQREPVVAAICDRLGVNDRGGSRASGEPPVVGVAGPSGAGKSTIASMIIARNDVRGHFSEKRIVWLPVGQGARDRLLDVMYRLAVMVHELVVNSSSFPDDGPFRPPQPPDIGVEPEDGAAYVREILTADEGERSSGGFGE-LLVVADDIWEAEVLAELRSTGASILYTTRSEEDLLAASGGSDVLRVDEVTEGEAEEILRRAADLLDHTKLPDAAHDIIRRGGPVAMDVAYVGRWDIVRGNNDQAAWAVVLAHVIDAQ------NFMKGAALLPWRSAVLRVGLTRLGLADQGTKELYLSLGVLPRNLSFSVGDVTALVSDG----SAEELQAATLAITTLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPATLGSALARWRNRVSTAEAVLAWRTEELVDIWQAIWSLEIGEGAAEIGQPYSEIVDAMNLSDAGAFQLLRRIAFFQWMTNEPDAACMSWSKLLASGEDSAAND-PDVHAIMYTLGAHALVSGRTHEAEGWFRRTLAI 813
BLAST of mRNA_F-serratus_M_contig1465.3264.1 vs. uniprot
Match: A0A6H5JK89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK89_9PHAE) HSP 1 Score: 325 bits (832), Expect = 1.590e-91 Identity = 223/577 (38.65%), Postives = 302/577 (52.34%), Query Frame = 1
Query: 67 LALRECRVSIPAAAPRIQPWYVERTFLIAEACARLGIRSLD--------RKPRLVGLSGPSGAGKSTVASMVIAREDVHAFFHGGVLWLPI-GRGAKDRIPALTLRLAGMVYEDVLE--------KACRPPRK-ADVGVEPEDGVDYIREVLGKL--GR-----------------RLLVVADDVWEEEVLQEMQKIGAWVLYT--------------SQADGLLGDAP--LRLDQLRTGEAEAVLRESAEIEENENLPETAHEVIRQSGFLVMDLAFVGRWGRVRGKSGWEEWQTILDRIEQARDGGEGGDDNSGGERLPWRTAVLRVGLGELALDASVNLELYLSLAVLPDGLEFGIEEVSALLHDDDSSCSPRALEDAAT--------VASTLERWSILTLEDGGRYRVHDRHAEFIRERVSKFPATRDNAARRWQGHVSTVDALLTWSGAELADIWRALARLNGATVIPWP-YGSALEAKASPDSRD---ALRRLAHLYYLTEDYEGAYKANTVLLEMEEEDLGRDHPD-------------VARALHNLAVCASEAGRTEEAESLYERSLAI 1563
+A +V +P+ APRIQ WY+ R+ + + CARLG+ S +PR+VGL+GP+G GKSTV S+V+AREDV A+F G++WLP+ G+GA+ R+P L L LA MVYE +L+ K RPPR V + E+G YIR LG GR R L+VADDV+E EVL+E+Q IGAWVLYT S+ DG GD LRLD + E E VLR ++ ++ LP+ A ++I+ G +VMDLA++GRWG VRG + + W+ L+ + EGGD R W TAVL G+ +LA +LYLSLAVLP GL F + +ALL AAT V LER S+L LE+GGRY +H HA+F+RE +S FP +R A RW+ H ST AL W + I AL L+ A P P Y + L+ D+ L R+A + L + EGA+ T L+ + E L R+ +A LHNL + A G TEEA + + R+ +I
Sbjct: 232 VAFLASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVGDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETILKSGEASWSSKKLRPPRTPGGVACDRENGAAYIRGALGITFPGREEGDGGGGSHEQRRWRPRYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLAYIGRWGVVRGTTDAKAWEAALNSVFL-----EGGDGGQEWTRRRWHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGDTKATQAAKAATPDLGAVMEVLGVLERCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRKRALGRWREHTSTPAALFAWPVEDSVRIQWALLSLDDAVESPPPPYDAMLDGMDQSDADTFSAVLERVAQVQALAGNLEGAHAKYTRLVGVTESRLEREAAGGGDSIRQAGAELLLADRLHNLGMIAGGLGSTEEAFACHGRARSI 803
BLAST of mRNA_F-serratus_M_contig1465.3264.1 vs. uniprot
Match: D7G2X0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X0_ECTSI) HSP 1 Score: 289 bits (740), Expect = 1.650e-80 Identity = 200/522 (38.31%), Postives = 275/522 (52.68%), Query Frame = 1
Query: 202 LVGLSGPSGAGKSTVASMVIAREDVHAFFHGGVLWLPI-GRGAKDRIPALTLRLAGMVYEDVLE--------KACRPPRK-ADVGVEPEDGVDYIREVLG-------------------KLGRRLLVVADDVWEEEVLQEMQKIGAWVLYT--------------SQADGLL----GDAP--LRLDQLRTGEAEAVLRESAEIEENENLPETAHEVIRQSGFLVMDLAFVGRWGRVRGKSGWEEWQTILDRIEQARDGGEGGDDNSGGERLPWRTAVLRVGLGELALDASVNLELYLSLAVLPDGLEFGIEEVSALLHDDDSSCSPRALEDAATVASTL---ERWSILTLEDGGRYRVHDRHAEFIRERVSKFPATRDNAARRWQGHVSTVDALLTWSGAELADIWRALARLNGATVIPWPYGSALEAKASPDSRD---ALRRLAHLYYLTEDYEGAYKANTVLLEMEEEDLGRDHPD-------------VARALHNLAVCASEAGRTEEAESLYERSLAI 1563
+VGL+GP+G GKSTV S+V+AREDV A F G++WLP+ G+GA+ R+P L L LA MVYE VL+ K RPPR V + E+G YIR LG + R L+VADDV+E EVL+E+Q IGAWVLYT S+ D GD LRLD + E E VLR ++ ++ LP+ A ++ + G +VMDLA++GRWG V G + + W+ L+ + +GGEGG + + R W TAVL G+ +LA +LYLSLAVLP GL F + +ALL D+ + A D V L E+ S+L LE+GGRY +H HA+F+RE +S FP +R A RW+ H ST AL W + I AL+ L+ A P PY + L+ D+ L R+A + L + EGA+ T L+ + E L R+ +A LHNL + A G TEEA + + R+ +I
Sbjct: 1 MVGLAGPTGCGKSTVTSLVVAREDVRAHFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASWSSKKLRPPRTPGGVACDRENGAAYIRGALGITRPGGEEGDGGGESHEQRRWRPRYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDXXXXXXXGDHADVLRLDNISDAEGETVLRRASGLDPEAELPQPALDLFKSYGSVVMDLAYIGRWGVVHGTTDVKAWEVALNSV--FLEGGEGGQEWT---RRRWHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPADAAALLFGGDTKAAKAATPDLGAVMEVLGVLEQCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRKRALGRWREHASTPAALFAWPVEDSVRIQWALSSLDDAVEPPPPYDAMLDGMDQSDADTFSAVLERVAQVQALAGNLEGAHAKYTRLVVVTESRLEREAAGGGDSISQAGAELLLADRLHNLGMIAGGLGSTEEAFACHGRARSI 517
BLAST of mRNA_F-serratus_M_contig1465.3264.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 261 bits (667), Expect = 5.900e-71 Identity = 182/508 (35.83%), Postives = 268/508 (52.76%), Query Frame = 1
Query: 91 SIPAAAPRIQPWYVERTFLIAEACARLGIRSLDRKPRLVGLSGPSGAGKSTVASMVIAREDVHAFFHGGVLWLPIGRGAKDRIPALTLRLAGMVYEDVLEKACRPPRKADVGVEPEDGVDYIREVL--GKLGRRL--LVVADDVWEEEVLQEMQKIGAWVLYTSQADGLL----GDAPLRLDQLRTGEAEAVLRESAEIEENENLPETAHEVIRQSGFLVMDLAFVGRWGRVRGKSGWEEWQTILDRIEQARDGGEGGDDNSGGERLPW--RTAVLRVGLGELAL---DASVNLELYLSLAVLPDGLEFGIEEVSALLHDDDSSCSPRALEDAATVASTLERWSILTLEDGGRYRVHDRHAEFIRERVSKFPATRDNAARRWQGHVSTVDALLTWSGAELADIWRALARLNGATVIPW----PYGSALEAKASPDS--RDALRRLAHLYYLTEDYEGAYKANTVLLEMEEEDLGRDHPDVARALHNLAVCASEAGRTEEAESLYERSL 1557
++P AP + W+VER +A L DR +V L+G SG+GK+TVA+ ++ +V F G++WLP+ GAK R+P+L L+LA MV+E++ R P + ED YI++ L G GRRL LVVAD+VWEE+V+ ++ + G WVL +++ + ++ G A + +D+L +AE+VL+ +AE+ LP+ A ++I+ G + MD+AFVGRW VRG+ W I + DN E +P R A+L+ G +LA+ D V LYLSLAV+PDG F +++ + LL+D S A A V LERWSI+ G YR+HD H +F RE + R A +RW ++S++D L + L +W A+ RL G W PY AL D+ R + ED EGA + LLE+E+ +LG DHP V NLA+ A G EEA +E+ +
Sbjct: 179 AVPMGAPVRKSWHVERRHAMATVLDALN--GSDRAC-VVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSAS------EDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVV-VDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQ-RLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEA--SAGGVVDVLERWSIIRSAQG-TYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDG---WGKTRPYEKALGMMLESDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEKEV 669
BLAST of mRNA_F-serratus_M_contig1465.3264.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 260 bits (665), Expect = 1.630e-70 Identity = 174/503 (34.59%), Postives = 261/503 (51.89%), Query Frame = 1
Query: 91 SIPAAAPRIQPWYVERTFLIAEACARLGIRSLDRKPRLVGLSGPSGAGKSTVASMVIAREDVHAFFHGGVLWLPIGRGAKDRIPALTLRLAGMVYEDVLEKACRPPRKADVGVEPEDGVDYIREVL----GKLGRRLLVVADDVWEEEVLQEMQKIGAWVLYTSQADGLLGDAP---LRLDQLRTGEAEAVLRESAEIEENENLPETAHEVIRQSGFLVMDLAFVGRWGRVRGKSGWEEWQTILDRIEQARDGGEGGDDNSGGE--RLPWRTAVLRVGLGELAL---DASVNLELYLSLAVLPDGLEFGIEEVSALLHDDDSSCSPRALEDAATVASTLERWSILTLEDGGRYRVHDRHAEFIRERVSKFPATRDNAARRWQGHVSTVDALLTWSGAELADIWRALARLNG-ATVIPWPYGSALEA---KASPDSRDALRRLAHLYYLTEDYEGAYKANTVLLEMEEEDLGRDHPDVARALHNLAVCASEAGRTEEAESLYER 1551
++P P + W+VER + L D P LVGL G SGAGK+T AS +++ V F G++WLP+ G D +P L L+LA MV+ED+ R P +D DG+ Y+++ + G G + LVVAD+VWE +V+ ++ + G W+L +++ + L+ A + +D+L EAE+VLR +AE+ LP+ A ++I G + MDLAFVGRW VRG+ W ++ D G +++G E R+ R A+L+ G +LA+ D V LYLSLAVLPDG F +++ + LL+D + A V LERW+I+ + YR+HD H+ F RE + R A +R +S+++AL + + L +W + R+ G PY ALEA SP R+ + +A ED+ GA + LL +EE LG DHP V H LA CA EEA+ + +
Sbjct: 202 NVPKGTPTHKSWHVERRNVTETVFQAL---DADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSD------DGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQ-RLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEA--SVGGVVEALERWTIIRSVEA-TYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRK 691 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1465.3264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1465.3264.1 >prot_F-serratus_M_contig1465.3264.1 ID=prot_F-serratus_M_contig1465.3264.1|Name=mRNA_F-serratus_M_contig1465.3264.1|organism=Fucus serratus male|type=polypeptide|length=764bp PSPCIFPHVPALPFARREVQQTLALRECRVSIPAAAPRIQPWYVERTFLIback to top mRNA from alignment at F-serratus_M_contig1465:21323..23983- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1465.3264.1 ID=mRNA_F-serratus_M_contig1465.3264.1|Name=mRNA_F-serratus_M_contig1465.3264.1|organism=Fucus serratus male|type=mRNA|length=2661bp|location=Sequence derived from alignment at F-serratus_M_contig1465:21323..23983- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1465:21323..23983- >mRNA_F-serratus_M_contig1465.3264.1 ID=mRNA_F-serratus_M_contig1465.3264.1|Name=mRNA_F-serratus_M_contig1465.3264.1|organism=Fucus serratus male|type=CDS|length=4584bp|location=Sequence derived from alignment at F-serratus_M_contig1465:21323..23983- (Fucus serratus male)back to top |