prot_F-serratus_M_contig1463.3257.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1463.3257.1
Unique Nameprot_F-serratus_M_contig1463.3257.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length148
Homology
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BLAST of mRNA_F-serratus_M_contig1463.3257.1 vs. uniprot
Match: D7FRR9_ECTSI (rRNA biogenesis protein rrp5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR9_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.180e-16
Identity = 53/89 (59.55%), Postives = 69/89 (77.53%), Query Frame = 0 
Query:   66 QTKPTQAPGKQSPGDSKARQHG-LRASNGQEKG-----MGSGMLVKRSGKVPRLEMVSFKKLSKGTLVLGVVFKVDEDDMVVSLTSSLT 148
            Q++P+ APGK+  G+S A   G + AS G+++G     +GSGMLV+ SG+ PRLEMVSFKKL+KGTL +GVVFK++E DMVVSL SSLT
Sbjct:   75 QSRPS-APGKRPRGESSASSPGGIGASKGKKRGSTASEVGSGMLVEHSGRAPRLEMVSFKKLNKGTLAMGVVFKINEHDMVVSLPSSLT 162
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BLAST of mRNA_F-serratus_M_contig1463.3257.1 vs. uniprot
Match: A0A6H5LPP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPP1_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 4.490e-10
Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = 0 
Query:   66 QTKPTQAPGKQSPGDSKARQHG-LRASNGQEKG-----MGSGMLVKRSGKVPRLEMVSFKKLSKGTLVLGVVFKV 134
            Q++P+  PGK+  G+S A   G + AS G+++G     +GSGMLV+ SG+ PRLEMVSFKKL+KGTL +GVVFKV
Sbjct:   73 QSRPS-VPGKRPRGESSASSPGSIGASKGKKRGSAGSEVGSGMLVEHSGRAPRLEMVSFKKLNKGTLAMGVVFKV 146
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1463.3257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRR9_ECTSI1.180e-1659.55rRNA biogenesis protein rrp5 n=1 Tax=Ectocarpus si... [more]
A0A6H5LPP1_9PHAE4.490e-1056.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1463contigF-serratus_M_contig1463:9903..12605 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1463.3257.1mRNA_F-serratus_M_contig1463.3257.1Fucus serratus malemRNAF-serratus_M_contig1463 9903..12634 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1463.3257.1 ID=prot_F-serratus_M_contig1463.3257.1|Name=mRNA_F-serratus_M_contig1463.3257.1|organism=Fucus serratus male|type=polypeptide|length=148bp
MTELDLFPRGKTPTDKSLSSSNQRKPRDDTRASSNDVKKDRKRKAVGSPP
PKAGEQDRDFLFGAPQTKPTQAPGKQSPGDSKARQHGLRASNGQEKGMGS
GMLVKRSGKVPRLEMVSFKKLSKGTLVLGVVFKVDEDDMVVSLTSSLT
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