prot_F-serratus_M_contig1462.3253.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1462.3253.1
Unique Nameprot_F-serratus_M_contig1462.3253.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length214
Homology
BLAST of mRNA_F-serratus_M_contig1462.3253.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 9.010e-45
Identity = 84/215 (39.07%), Postives = 128/215 (59.53%), Query Frame = 0
Query:    5 PYREAVGALMWAVTMTRPDVAYASHQLGKFNDNPRPVHWRAAKRARQNLWRTKDVEITYGGTPGSCTKWSTWEDANFVTCPDTRRLASGGAVILGGGAISWFS-----TATPSSKSEYVALAEVVNSLRFLQQVKGFLTPPIDNNII-IREDNEGAIKMPTNRISNRCTRHVDARHHIVRDAVNSGVVQIHNVKSGEQHADVLTKALDVNSFETH 213
            P+RE +G+LMW  T TRPD+A A   + ++  +P+ +HWRA       + RT D+ IT+     +      + DA++ +    RR  SGG V+ GGG +SWFS         ++++EYV+LA+V+  + FL+QV+ F+ P      I + EDN+GAI++  N ISN  ++H+D RHH +R+ V    + I +V+S  QHAD LTKAL+   FE H
Sbjct:   32 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKALNAGDFECH 246          
BLAST of mRNA_F-serratus_M_contig1462.3253.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 4.150e-42
Identity = 85/215 (39.53%), Postives = 126/215 (58.60%), Query Frame = 0
Query:    5 PYREAVGALMWAVTMTRPDVAYASHQLGKFNDNPRPVHWRAAKRARQNLWRTKDVEITYGGTPGSCTKWSTWEDANFVTCPDTRRLASGGAVILGGGAISWFS-----TATPSSKSEYVALAEVVNSLRFLQQVKGFLTPPIDNNII-IREDNEGAIKMPTNRISNRCTRHVDARHHIVRDAVNSGVVQIHNVKSGEQHADVLTKALDVNSFETH 213
            P+RE +G+LMW  T TRPD+A A   + ++  +P+ +HWRA       + RT D+ IT+     +      + DA++ +    RR  SGG V+ GGG ISWFS         ++++EYV+LA+V+  + FL+QV  F+ P      I + EDN+GAI++  N ISN  ++H+D RHH +R+ V    + I +V+S  QHAD LTKAL    FE H
Sbjct:  216 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFH 430          
BLAST of mRNA_F-serratus_M_contig1462.3253.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 4.940e-41
Identity = 85/215 (39.53%), Postives = 126/215 (58.60%), Query Frame = 0
Query:    5 PYREAVGALMWAVTMTRPDVAYASHQLGKFNDNPRPVHWRAAKRARQNLWRTKDVEITYGGTPGSCTKWSTWEDANFVTCPDTRRLASGGAVILGGGAISWFS-----TATPSSKSEYVALAEVVNSLRFLQQVKGFLTPPIDNNII-IREDNEGAIKMPTNRISNRCTRHVDARHHIVRDAVNSGVVQIHNVKSGEQHADVLTKALDVNSFETH 213
            P+RE +G+LMW  T TRPD+A A   + ++  +P+ +HWRA       + RT D+ IT+     +      + DA++ +    RR  SGG V+ GGG ISWFS         ++++EYV+LA+V+  + FL+QV  F+ P      I + EDN+GAI++  N ISN  ++H+D RHH +R+ V    + I +V+S  QHAD LTKAL    FE H
Sbjct:  390 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFH 604          
BLAST of mRNA_F-serratus_M_contig1462.3253.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 6.180e-41
Identity = 83/215 (38.60%), Postives = 124/215 (57.67%), Query Frame = 0
Query:    5 PYREAVGALMWAVTMTRPDVAYASHQLGKFNDNPRPVHWRAAKRARQNLWRTKDVEITYGGTPGSCTKWSTWEDANFVTCPDTRRLASGGAVILGGGAISWFS-----TATPSSKSEYVALAEVVNSLRFLQQVKGFLTPPIDNNII-IREDNEGAIKMPTNRISNRCTRHVDARHHIVRDAVNSGVVQIHNVKSGEQHADVLTKALDVNSFETH 213
            P+RE +G+LMW  T TRP++A A+  + ++  +P+ +HWRA       + RT D+ IT+G    +      + DA++ +    RR  SGG V+ G G ISWFS         ++++EYV+LA+V+  + FL+QV  F+ P      I + EDN+GAI++  N ISN  ++H D RHH + + V    + I  V+S  QHAD LTKAL    FE H
Sbjct:   71 PFRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHFDVRHHFIGELVGRKEISIFYVESAYQHADFLTKALHFGDFEFH 285          
BLAST of mRNA_F-serratus_M_contig1462.3253.1 vs. uniprot
Match: A0A6H5L0C9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C9_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 1.960e-40
Identity = 85/215 (39.53%), Postives = 127/215 (59.07%), Query Frame = 0
Query:    5 PYREAVGALMWAVTMTRPDVAYASHQLGKFNDNPRPVHWRAAKRARQNLWRTKDVEITYGGTPGSCTKWSTWEDANFVTCPDTRRLASGGAVILGGGAISWFS-----TATPSSKSEYVALAEVVNSLRFLQQVKGFLTPPIDNNII-IREDNEGAIKMPTNRISNRCTRHVDARHHIVRDAVNSGVVQIHNVKSGEQHADVLTKALDVNSFETH 213
            P+RE +G+LMW  T TRPD+A A   + ++  +P+ +HWRA       + RT D+ IT+     +      + DA++ +    RR  SGG VI GGG ISWFS         ++++EYV+LA+V+  + FL+QV  F+ P    + I + EDN+GAI++  N ISN  ++H+D RHH +R+ V    + I +V+S  Q+AD LTKAL    FE H
Sbjct:  675 PFRELIGSLMWLATQTRPDIANAVRAVARYYASPKEIHWRAGLGILGCVVRTSDLGITFRRRSVAGLSIEVFADADYASKAADRRSVSGGLVICGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMSCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQYADFLTKALHAGDFEFH 889          
BLAST of mRNA_F-serratus_M_contig1462.3253.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 7.460e-40
Identity = 84/215 (39.07%), Postives = 126/215 (58.60%), Query Frame = 0
Query:    5 PYREAVGALMWAVTMTRPDVAYASHQLGKFNDNPRPVHWRAAKRARQNLWRTKDVEITYGGTPGSCTKWSTWEDANFVTCPDTRRLASGGAVILGGGAISWFS-----TATPSSKSEYVALAEVVNSLRFLQQVKGFLTPPIDNNII-IREDNEGAIKMPTNRISNRCTRHVDARHHIVRDAVNSGVVQIHNVKSGEQHADVLTKALDVNSFETH 213
            P+RE +G+LMW  T TRPD+A A   + ++  +P+ +HWRA       + RT D+ IT+     +      + DA++ +    RR  SGG V+ GGG ISWFS         ++++EYV+LA+V+  + FL+QV  F+ P      I + EDN+GAI++  N ISN  ++H+D RHH +R+ V    + I +V+S  QHA+ LTKAL    FE H
Sbjct:  911 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKALHAGDFEFH 1125          
BLAST of mRNA_F-serratus_M_contig1462.3253.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.240e-39
Identity = 82/215 (38.14%), Postives = 125/215 (58.14%), Query Frame = 0
Query:    5 PYREAVGALMWAVTMTRPDVAYASHQLGKFNDNPRPVHWRAAKRARQNLWRTKDVEITYGGTPGSCTKWSTWEDANFVTCPDTRRLASGGAVILGGGAISWFS-----TATPSSKSEYVALAEVVNSLRFLQQVKGFLTPPIDNNII-IREDNEGAIKMPTNRISNRCTRHVDARHHIVRDAVNSGVVQIHNVKSGEQHADVLTKALDVNSFETH 213
            P+RE VG+LMW  T TRPD+A A   + ++  +P+ VHW+AA      + RT  + IT+     +      + DA++ +    RR  SGG V+ GGG ++WFS         ++++EYVA+A+V+  + FL+QV  F+ P      I + EDN+GAI++  N I+N  ++H+D RHH +R+ V    + I NV +  QHAD LTKA+   SF  H
Sbjct:   99 PFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISKESFALH 313          
BLAST of mRNA_F-serratus_M_contig1462.3253.1 vs. uniprot
Match: A0A6H5LC04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC04_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 1.380e-39
Identity = 83/215 (38.60%), Postives = 127/215 (59.07%), Query Frame = 0
Query:    5 PYREAVGALMWAVTMTRPDVAYASHQLGKFNDNPRPVHWRAAKRARQNLWRTKDVEITYGGTPGSCTKWSTWEDANFVTCPDTRRLASGGAVILGGGAISWFS-----TATPSSKSEYVALAEVVNSLRFLQQVKGFLTPPIDNNII-IREDNEGAIKMPTNRISNRCTRHVDARHHIVRDAVNSGVVQIHNVKSGEQHADVLTKALDVNSFETH 213
            P+RE +G+L+W  T TRPD+A A   + ++  +P+ +HWRA       + RT D+ IT+G    +      + DA++ +    RR  SGG V+ GGG ISWFS         ++++EYV++A+V+  L FL++V  F+ P      I + EDN+ A+++  N ISN  ++H+D RHH +R+ V    + I +V+S  QHAD LTKAL V  FE H
Sbjct:  907 PFRELIGSLVWLATQTRPDIANALRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAMLSMEVFGDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSVADVMKELLFLRKVWRFMLPEAGMPCIPVFEDNQRALQLAQNPISNSNSKHIDVRHHSIRELVGREEISIFHVESAYQHADFLTKALHVGDFEFH 1121          
BLAST of mRNA_F-serratus_M_contig1462.3253.1 vs. uniprot
Match: A0A6H5KSZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ5_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.360e-38
Identity = 83/215 (38.60%), Postives = 121/215 (56.28%), Query Frame = 0
Query:    5 PYREAVGALMWAVTMTRPDVAYASHQLGKFNDNPRPVHWRAAKRARQNLWRTKDVEITYGGTPGSCTKWSTWEDANFVTCPDTRRLASGGAVILGGGAISWFS-----TATPSSKSEYVALAEVVNSLRFLQQVKGFLTPPIDNNII-IREDNEGAIKMPTNRISNRCTRHVDARHHIVRDAVNSGVVQIHNVKSGEQHADVLTKALDVNSFETH 213
            P+RE VG+LMW  T TRP +A A   + ++  +P+ VHW AA        RT    I++            + DA+F +    RR  SGG V  GGGA+SWFS         ++++EYVAL +VV  + FL+Q+  F+ P +    I I EDN+GAI++  N ISN  ++H+D RHH +R+ V      + +V S  Q AD LTK+L  ++FE+H
Sbjct:   70 PFRELVGSLMWLATQTRPAIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSITQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGIPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVEREEFSVMHVPSPNQRADCLTKSLSKDAFESH 284          
BLAST of mRNA_F-serratus_M_contig1462.3253.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 2.260e-38
Identity = 81/215 (37.67%), Postives = 125/215 (58.14%), Query Frame = 0
Query:    5 PYREAVGALMWAVTMTRPDVAYASHQLGKFNDNPRPVHWRAAKRARQNLWRTKDVEITYGGTPGSCTKWSTWEDANFVTCPDTRRLASGGAVILGGGAISWFS-----TATPSSKSEYVALAEVVNSLRFLQQVKGFLTPPIDNNII-IREDNEGAIKMPTNRISNRCTRHVDARHHIVRDAVNSGVVQIHNVKSGEQHADVLTKALDVNSFETH 213
            P+RE VG+LMW  T TRPD+A A   + ++  +P+ VHW+AA      + RT  + IT+     +      + DA++ +    RR  SGG V+ GGG ++WFS         ++++EYVA+A+V+  + FL+QV  F+ P      I + EDN+GAI++  N I+N  ++H+D RHH +R+ V    + I +V +  QHAD LTKA+   SF  H
Sbjct:  154 PFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALH 368          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1462.3253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTK6_9PHAE9.010e-4539.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLN0_9PHAE4.150e-4239.53Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE4.940e-4139.53Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KD60_9PHAE6.180e-4138.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0C9_9PHAE1.960e-4039.53Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K2R1_9PHAE7.460e-4039.07Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5KP70_9PHAE1.240e-3938.14Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LC04_9PHAE1.380e-3938.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSZ5_9PHAE1.360e-3838.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE2.260e-3837.67Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..206
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 3..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..214
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1462contigF-serratus_M_contig1462:117185..117826 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1462.3253.1mRNA_F-serratus_M_contig1462.3253.1Fucus serratus malemRNAF-serratus_M_contig1462 117185..117826 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1462.3253.1 ID=prot_F-serratus_M_contig1462.3253.1|Name=mRNA_F-serratus_M_contig1462.3253.1|organism=Fucus serratus male|type=polypeptide|length=214bp
MRVTPYREAVGALMWAVTMTRPDVAYASHQLGKFNDNPRPVHWRAAKRAR
QNLWRTKDVEITYGGTPGSCTKWSTWEDANFVTCPDTRRLASGGAVILGG
GAISWFSTATPSSKSEYVALAEVVNSLRFLQQVKGFLTPPIDNNIIIRED
NEGAIKMPTNRISNRCTRHVDARHHIVRDAVNSGVVQIHNVKSGEQHADV
LTKALDVNSFETHA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like