mRNA_F-serratus_M_contig146.3248.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig146.3248.1
Unique NamemRNA_F-serratus_M_contig146.3248.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig146.3248.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 3.160e-61
Identity = 120/296 (40.54%), Postives = 163/296 (55.07%), Query Frame = 1
Query:    4 GVPKAFTSDGGTHFTGQVMRMVSSRLRVVPHFGVANVSWSHGTIDRMNREVVKTFRAVLSERRRPPSEWPLALGAVQWTLNSAYRERMGMAPFQIMVRRTPATAMS------------------------------QEDLRRDVVKRVREQREPVREVSGRGYLPVFEVGDYVLVVRVRKPGRVPKLVQTWTGPWRVVRV-------VENIVTGETKEVHVVRMRQYSDPSLVV--EVREVFEMTKHQGEFEIADVIGVGKDPARVGE-YRVQIAWVGLEDEEPTWEPMATYYADA 771
            GVP+ + SD  THF   VM  +   L V   F VAN  WS+GT +RM REVV+T +AVL ERRR   +W   + AVQW LN+AYRER    P+ +M  R P T+ S                              Q  L + + ++V   R   R  + RG LP F VGDYV+V RVR+ G  PKL  TWTGPWRVV         V+NIV G+ ++VHV R+R Y+D  L V  ++++VF+ +  QGE E+  ++ +G  PA  G  Y V++ W G E++E TW+P++  Y DA
Sbjct:  104 GVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDA 397          
BLAST of mRNA_F-serratus_M_contig146.3248.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 1.190e-57
Identity = 120/296 (40.54%), Postives = 163/296 (55.07%), Query Frame = 1
Query:    4 GVPKAFTSDGGTHFTGQVMRMVSSRLRVVPHFGVANVSWSHGTIDRMNREVVKTFRAVLSERRRPPSEWPLALGAVQWTLNSAYRERMGMAPFQIMVRRTPATAMS------------------------------QEDLRRDVVKRVREQREPVREVSGRGYLPVFEVGDYVLVVRVRKPGRVPKLVQTWTGPWRVVRV-------VENIVTGETKEVHVVRMRQYSDPSLVV--EVREVFEMTKHQGEFEIADVIGVGKDPARVGE-YRVQIAWVGLEDEEPTWEPMATYYADA 771
            GVP+ + SD  THF   VM  +   L V   F VAN  WS+GT +RM RE+V+T +AVL ERRR   +W   + AVQW LN+AYRER    P+ +M  R P T+ S                              Q  L + V ++V   R   R  + RG LP F VGDYV+V RVR+ G  PKL  TWTGPWRVV         V+NIV G+ ++VHV R+R Y+D  L V  ++++VF+ +  QGE E+  ++ +G  PA  G  Y V++ W G E++E TW+P++  Y DA
Sbjct: 1327 GVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDA 1620          
BLAST of mRNA_F-serratus_M_contig146.3248.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 4.100e-40
Identity = 99/282 (35.11%), Postives = 147/282 (52.13%), Query Frame = 1
Query:    4 GVPKAFTSDGGTHFTGQVMRMVSSRLRVVPHFGVANVSWSHGTIDRMNREVVKTFRAVLSERRRPPSEWPLALGAVQWTLNSAYRERMGMAPFQIMVRRTPATAMS------------------------------QEDLRRDVVKRVREQREPVREVSGRGYLPVFEVGDYVLVVRVRKPGRVPKLVQTWTGPWRVVRVVENIVTGETKEVHVVRMRQYSDPSLVV--EVREVFEMTKHQGEFEIADVIGVGKDPARVGEYRVQIAWVGLEDEEPTWEPMA 753
            GVP+ + SD  +HF   +M  + + L V  +F VAN  WS+GT +RM REVV+T +A++ E R    +W   + AVQW LN+A+RER G  P+ +M  R P TA+S                              Q  L ++V+ +V+  R   R  +  G LP F VGDYV+V   R                  V  V+NIV+GE ++VHV R+R Y+D +L +  E++EVF+    QGEFE+A ++ +       G + V++ WVG + EE TWE ++
Sbjct: 1429 GVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWKVDVLDEKSLRLKVQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFVVGDYVIVAAERLH----------------VYGVQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMSVAEDGPG-FDVEVEWVGFDKEENTWEELS 1693          
BLAST of mRNA_F-serratus_M_contig146.3248.1 vs. uniprot
Match: A0A6G0RPX5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RPX5_9STRA)

HSP 1 Score: 119 bits (299), Expect = 4.950e-28
Identity = 90/293 (30.72%), Postives = 142/293 (48.46%), Query Frame = 1
Query:    1 FGVPKAFTSDGGTHFTGQVMRMVSSRLRVVPHFGVANVSWSHGTIDRMNREVVKTFRAVLSERRRPPSEWPLALGAVQWTLNSAYRERMGM-APFQIMVRRTPATAMSQ-----------------------EDLRRDVV---KRVREQREPVR---EVSGRGYLPVFEVGDYVLVVRVRKPGRVPKLVQTWTGPWRVVR------VVENIVTGETKEVHVVRMRQYSDPSLVVEVREVFEMTKHQG-EFEIADVIGVGKDPARVGEYRVQIAWVGLEDEEPTWEPMATYYAD 768
            FG+P+++ SD G+HF  +VM  +  RL+    F  A   W +GT++R+NR++++  RA+L E +     W   L  +Q  LN +    +G  AP ++ +     +A+                         E LRR +    K    Q+E  R       +G +  F VGD+VL  RV    +  KL+  W GP+RVV       ++E+++T +  EVH  R++ Y D SL V   E+ E    QG    +  ++    +P    E+ VQ+AW+GLED E +WEP+   YAD
Sbjct:   58 FGLPESWESDNGSHFKAEVMASLCERLKANQSFVPAYTPWINGTVERINRDILQVLRAMLLEFQLDTGNWLYLLPLIQANLNHSPVASLGNHAPIEVFMGLPAPSALDTIAVPSDKGTRLVPVDPERVSAHVEKLRRSLHAMRKEATTQKEKKRLYEMARAKGGICNFAVGDFVLWSRVDSRLQGSKLLVRWVGPFRVVEARQHSFIIEHLITKDKVEVHGSRLKFYCDSSLNV-TAELKEHVAKQGIVLGVRAIVNHRNNPVS-NEWEVQVAWIGLEDVENSWEPLRRIYAD 348          
BLAST of mRNA_F-serratus_M_contig146.3248.1 vs. uniprot
Match: A0A2P4XSG7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSG7_9STRA)

HSP 1 Score: 117 bits (294), Expect = 9.560e-27
Identity = 86/269 (31.97%), Postives = 128/269 (47.58%), Query Frame = 1
Query:    1 FGVPKAFTSDGGTHFTGQVMRMVSSRLRVVPHFGVANVSWSHGTIDRMNREVVKTFRAVLSERRRPPSEWPLALGAVQWTLNSAYRERM-GMAPFQIMVRRTPATAMSQEDLRR-----DVVKRVREQREPVREVSGRGYLPVFEVGDYVLVVRVRKPGRVPKLVQTWTGPWRVVRV-------VENIVTGETKEVHVVRMRQYSDPSLVVEVREVFEMTKHQGEFEIADVIGVGKDPARVGEYRVQIAWVGLEDEEPTWEPMATYYAD 768
            FGV + + SD GTHF  +V+  +   L    HF  A   W++GT++ +NREV++  RA+LSE R    EWP  +  VQ  LN +    + G+AP   M   T   AM+  D         V      QR           +  F+VGD+VL   V +  R  KL   W GP +V          +EN++TGE +EVH  R++ Y+D SL V   ++     H  E  + D +   +  A+   + +++ W GL + E +WEP A    D
Sbjct:  183 FGVVRWWVSDQGTHFKNKVIEGLQHALGAHHHFTTARCPWANGTVEVVNREVLRCCRALLSEWRLQSGEWPRVIKIVQMVLNHSPCSAIDGVAPVTAM---TGLKAMNPTDPLAVPDPIQVATLDEIQRRKHHNGKKGTTMAQFDVGDFVLYADVWQHARA-KLRVKWCGPAQVTAATSNWIFEIENLITGERREVHASRLKFYADSSLEV-TEDLLRHVAHNSEGHVVDSLLAARYNAQEKRHELKVHWRGLAEAEDSWEPAAVLLQD 446          
BLAST of mRNA_F-serratus_M_contig146.3248.1 vs. uniprot
Match: A0A6A4G1U2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G1U2_9STRA)

HSP 1 Score: 116 bits (290), Expect = 9.200e-26
Identity = 88/293 (30.03%), Postives = 140/293 (47.78%), Query Frame = 1
Query:    1 FGVPKAFTSDGGTHFTGQVMRMVSSRLRVVPHFGVANVSWSHGTIDRMNREVVKTFRAVLSERRRPPSEWPLALGAVQWTLNSAYRERMGM-APFQIMVRRTPATAMSQ-----------------------EDLRRDVV---KRVREQREPVR---EVSGRGYLPVFEVGDYVLVVRVRKPGRVPKLVQTWTGPWRVVR------VVENIVTGETKEVHVVRMRQYSDPSLVVEVREVFEMTKHQG-EFEIADVIGVGKDPARVGEYRVQIAWVGLEDEEPTWEPMATYYAD 768
            FG+P+++ SD G+HF  +VM  +  RL+    F      W +GT++R+NR++++  RA+L E +     W   L  +Q  LN +    +G  AP ++       +A+                         E LRR +    K    Q+E  R       +G +  F VGD+VL  RV    +  KL+  W GP+RVV       ++++++T +  EVH  R++ Y D SL V   E+ E    QG    +  ++    +P    E+ VQ+AW+GLED E +WEP+   YAD
Sbjct:  681 FGLPESWESDNGSHFKAEVMASLCERLKANQSFVPVYTPWINGTVERINRDILQVLRAMLLEFQLDTRNWLYLLPLIQANLNHSPVASLGNHAPIEVFTGLPAPSALDTIAVPSDKGTRLVPVDPERVSAHVEKLRRSLHAMHKEATTQKEKKRLYEMARAKGGICNFAVGDFVLWSRVDSRLQGSKLLVRWVGPFRVVEARQHSFIIDHLITKDKVEVHGSRLKFYCDSSLNV-TAELKEHVAKQGIVLGVRAIVNHRNNPVS-NEWEVQVAWIGLEDVENSWEPLRRIYAD 971          
BLAST of mRNA_F-serratus_M_contig146.3248.1 vs. uniprot
Match: A0A6A3KPV3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3KPV3_9STRA)

HSP 1 Score: 116 bits (290), Expect = 9.820e-26
Identity = 88/293 (30.03%), Postives = 140/293 (47.78%), Query Frame = 1
Query:    1 FGVPKAFTSDGGTHFTGQVMRMVSSRLRVVPHFGVANVSWSHGTIDRMNREVVKTFRAVLSERRRPPSEWPLALGAVQWTLNSAYRERMGM-APFQIMVRRTPATAMSQ-----------------------EDLRRDVV---KRVREQREPVR---EVSGRGYLPVFEVGDYVLVVRVRKPGRVPKLVQTWTGPWRVVR------VVENIVTGETKEVHVVRMRQYSDPSLVVEVREVFEMTKHQG-EFEIADVIGVGKDPARVGEYRVQIAWVGLEDEEPTWEPMATYYAD 768
            FG+P+++ SD G+HF  +VM  +  RL+    F      W +GT++R+NR++++  RA+L E +     W   L  +Q  LN +    +G  AP ++       +A+                         E LRR +    K    Q+E  R       +G +  F VGD+VL  RV    +  KL+  W GP+RVV       ++++++T +  EVH  R++ Y D SL V   E+ E    QG    +  ++    +P    E+ VQ+AW+GLED E +WEP+   YAD
Sbjct: 1097 FGLPESWESDNGSHFKAEVMASLCERLKANQSFVPVYTPWINGTVERINRDILQVLRAMLLEFQLDTRNWLYLLPLIQANLNHSPVASLGNHAPIEVFTGLPAPSALDTIAVPSDKGTRLVPVDPERVSAHVEKLRRSLHAMHKEATTQKEKKRLYEMARAKGGICNFAVGDFVLWSRVDSRLQGSKLLVRWVGPFRVVEARQHSFIIDHLITKDKVEVHGSRLKFYCDSSLNV-TAELKEHVAKQGIVLGVRAIVNHRNNPVS-NEWEVQVAWIGLEDVENSWEPLRRIYAD 1387          
BLAST of mRNA_F-serratus_M_contig146.3248.1 vs. uniprot
Match: W4G085_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G085_9STRA)

HSP 1 Score: 107 bits (266), Expect = 8.840e-24
Identity = 81/266 (30.45%), Postives = 125/266 (46.99%), Query Frame = 1
Query:    7 VPKAFTSDGGTHFTGQVMRMVSSRLRVVPHFGVANVSWSHGTIDRMNREVVKTFRAVLSERRRPPSEWPLALGAVQWTLNSAYRERMGMAPFQIMVRRTPATAMSQEDLRRDVV-----KRVREQREPVREVSG-----RGYLPVF--EVGDYVLVVRVRKPGRVPKLVQTWTGPWRVVRV------VENIVTGETKEVHVVRMRQYSDPSLVVEVREVFEMTKHQGEFEIADVIGVGKDPARVGEYRVQIAWVGLEDEEPTWEPM 750
            +P+ + SD GTHF    M+ ++ + +V     +    W +GT++RMNR++++  R +L E +    EW   L  VQ  LN             +     PAT +       DVV     K +RE    V+E+       R  L V   E  +YVL  RV +    PKL+ TWTGP+RV  V      +E++VT E ++ H  R++ Y++ S  V   E+ E    QG       I   K    V ++ +++ W G ED E +WEP+
Sbjct:    1 MPRVWVSDQGTHFENVAMKALAHKFKVHHDLTLTYCPWRNGTVERMNRDILQVMRVMLREYQLAQQEWDYLLAVVQANLNQT----------PLFTALNPATPL-------DVVVVGMNKELRENDWTVKEIPKNLDKLRASLQVMHKERSNYVLWSRVDERYH-PKLLVTWTGPYRVKEVGEFSVVLEHLVTHELRKAHASRVKLYAEDSFKV-TEEILEHVSEQGIMLKVKSIAGHKFVPDVKDFMLEVLWEGFEDIESSWEPL 247          
BLAST of mRNA_F-serratus_M_contig146.3248.1 vs. uniprot
Match: A0A225VKM9_9STRA (RNA-directed DNA polymerase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VKM9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 9.370e-24
Identity = 89/289 (30.80%), Postives = 137/289 (47.40%), Query Frame = 1
Query:    1 FGVPKAFTSDGGTHFTGQVMRMVSSRLRVVPHFGVANVSWSHGTIDRMNREVVKTFRAVLSERRRPPSEWPLALGAVQWTLNSAYRERMGM-----------APFQIMVRRTPA---TAMSQEDLRR----------DVVKRVREQREPVR---EVSGRGYLPVFEVGDYVLVVRVRKPGRVPKLVQTWTGPWRVVR------VVENIVTGETKEVHVVRMRQYSDPSLVVEVREVFEMTKHQGEFEIADVIGVGKDPARVGEYRVQIAWVGLEDEEPTWEPMATYYAD 768
            FG+P+++ S  G++F  +VM  +S RL+    F        +GT++R+NR++++  RA+L E +     W   L  +Q  LN A    +G            AP  +     P+   T +   D  R          D+ K    QRE  R       +G +  F VGD+VL  RV    +  KL+  W GP+RVV       +V++++T +  EVH  R++ Y D SL V   E+ E    QG      V+GV        ++ VQ+AW+GLED E +WEP+ + Y D
Sbjct:  915 FGLPESWESANGSYFKAEVMEQLSKRLKANQSFVPVYTPCINGTVERINRDILQVLRAMLLEFQLDTRNWLYLLPLIQANLNHAPVASLGNXXXXXXFTGLPAPSALDTIAVPSDKGTRLVPVDPERVSAHVEKYLHDMHKEAATQREKKRLYEMARAKGRICNFVVGDFVLWSRVDSRLQGSKLLVRWVGPFRVVEARQHSFIVQHLITKDKVEVHGSRLKFYCDSSLNV-TAELKEHVAKQG-----IVLGVRASITGSTQWEVQVAWIGLEDVENSWEPLRSIYVD 1197          
BLAST of mRNA_F-serratus_M_contig146.3248.1 vs. uniprot
Match: A0A6A4BBJ8_9STRA (Uncharacterized protein n=5 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4BBJ8_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.990e-23
Identity = 85/292 (29.11%), Postives = 139/292 (47.60%), Query Frame = 1
Query:    1 FGVPKAFTSDGGTHFTGQVMRMVSSRLRVVPHFGVANVSWSHGTIDRMNREVVKTFRAVLSERRRPPSEWPLALGAVQWTLNSAYRERMGM-------------APFQ-IMVRRTPATAMSQED----------LRRDV------VKRVREQREPVREVSGRGYLPVFEVGDYVLVVRVRKPGRVPKLVQTWTGPWRVVR------VVENIVTGETKEVHVVRMRQYSDPSLVVEVREVFEMTKHQG-EFEIADVIGVGKDPARVGEYRVQIAWVGLEDEEPTWEPMATYYA 765
            FG P    SD G+HF   V++ V  +L++     VA   W +GT++R+NR++++  R +L E +    EW   L  VQ  LN      +G              +PF+ +++       +  ED          LR D+      V  +RE+R        +G    F VGD+VL  R+ +   V KL+  W GP+ VV       V+ ++VT +T +VH  R++ YSD +L V+     EM  H G +  +  V  +       G++++ ++WVGL+DEE +WE + +  A
Sbjct:  614 FGAPSVLISDQGSHFKNAVVQQVCKKLQLRQELVVAYSPWINGTVERVNRDILQVMRVLLMELKLDTHEWVYLLPLVQGNLNHTPVASLGNRSPVETFTGLRRPSPFEPVIIEMNGKPVVLTEDIALPGDRMERLRSDLMAMHREVADLREKRRLQNMQLSKGSPCNFAVGDFVLWSRIDQRLTVDKLLARWVGPFEVVETRPHSFVIRHLVTDQTFDVHCSRLKFYSDSALNVDE----EMLAHIGNQGMLLGVEAIKHHRNEHGDWQLFVSWVGLQDEEDSWESLRSMNA 901          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig146.3248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVS6_9PHAE3.160e-6140.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE1.190e-5740.54Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE4.100e-4035.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6G0RPX5_9STRA4.950e-2830.72Uncharacterized protein n=4 Tax=Phytophthora fraga... [more]
A0A2P4XSG7_9STRA9.560e-2731.97Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6A4G1U2_9STRA9.200e-2630.03Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A6A3KPV3_9STRA9.820e-2630.03Uncharacterized protein n=3 Tax=Phytophthora rubi ... [more]
W4G085_9STRA8.840e-2430.45Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A225VKM9_9STRA9.370e-2430.80RNA-directed DNA polymerase n=1 Tax=Phytophthora m... [more]
A0A6A4BBJ8_9STRA2.990e-2329.11Uncharacterized protein n=5 Tax=Phytophthora fraga... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig146contigF-serratus_M_contig146:483474..484346 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score123.6
Seed ortholog evalue1.3e-25
Seed eggNOG ortholog4792.ETI57041
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QEWS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size777
Cds size777
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929444.9432626-CDS-F-serratus_M_contig146:483473..4837941622929444.9432626-CDS-F-serratus_M_contig146:483473..483794Fucus serratus maleCDSF-serratus_M_contig146 483474..483794 +
1690962855.7390964-CDS-F-serratus_M_contig146:483473..4837941690962855.7390964-CDS-F-serratus_M_contig146:483473..483794Fucus serratus maleCDSF-serratus_M_contig146 483474..483794 +
1622929444.9657536-CDS-F-serratus_M_contig146:483890..4843461622929444.9657536-CDS-F-serratus_M_contig146:483890..484346Fucus serratus maleCDSF-serratus_M_contig146 483891..484346 +
1690962855.7537255-CDS-F-serratus_M_contig146:483890..4843461690962855.7537255-CDS-F-serratus_M_contig146:483890..484346Fucus serratus maleCDSF-serratus_M_contig146 483891..484346 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig146.3248.1prot_F-serratus_M_contig146.3248.1Fucus serratus malepolypeptideF-serratus_M_contig146 483474..484346 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig146.3248.1

>prot_F-serratus_M_contig146.3248.1 ID=prot_F-serratus_M_contig146.3248.1|Name=mRNA_F-serratus_M_contig146.3248.1|organism=Fucus serratus male|type=polypeptide|length=259bp
FGVPKAFTSDGGTHFTGQVMRMVSSRLRVVPHFGVANVSWSHGTIDRMNR
EVVKTFRAVLSERRRPPSEWPLALGAVQWTLNSAYRERMGMAPFQIMVRR
TPATAMSQEDLRRDVVKRVREQREPVREVSGRGYLPVFEVGDYVLVVRVR
KPGRVPKLVQTWTGPWRVVRVVENIVTGETKEVHVVRMRQYSDPSLVVEV
REVFEMTKHQGEFEIADVIGVGKDPARVGEYRVQIAWVGLEDEEPTWEPM
ATYYADAS*
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mRNA from alignment at F-serratus_M_contig146:483474..484346+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig146.3248.1 ID=mRNA_F-serratus_M_contig146.3248.1|Name=mRNA_F-serratus_M_contig146.3248.1|organism=Fucus serratus male|type=mRNA|length=873bp|location=Sequence derived from alignment at F-serratus_M_contig146:483474..484346+ (Fucus serratus male)
TTTGGGGTGCCCAAGGCGTTCACCAGTGATGGTGGGACGCATTTTACCGG GCAAGTGATGCGCATGGTGTCGTCCCGATTGAGGGTGGTTCCCCATTTTG GCGTGGCGAATGTTTCGTGGTCGCATGGGACGATAGATCGGATGAACCGT GAAGTCGTGAAGACGTTTCGTGCGGTTCTCAGCGAAAGACGTCGGCCTCC GAGCGAGTGGCCGTTGGCGTTGGGGGCTGTGCAGTGGACTCTCAATTCGG CGTACCGGGAGCGCATGGGGATGGCACCGTTCCAGATCATGGTGAGAAGA ACGCCTGCGACAGCAATGTCGGTGCTTGCAGGGGATAACGGTGACGCGTA GACTGTCGAGGAGCTAGACGTGTCATGCGAGCAAATGCAGTCCTGGGTTG CTGGTTGGGTGCGAGAGCAGGAAGACTTACGGCGTGACGTGGTGAAGCGC GTTCGGGAGCAGCGTGAGCCTGTTCGAGAGGTGAGCGGTCGTGGATACTT GCCGGTGTTTGAGGTTGGTGACTATGTCTTGGTGGTTCGGGTGAGGAAAC CGGGTCGTGTGCCTAAGCTCGTACAGACCTGGACTGGACCGTGGCGTGTT GTTCGTGTAGTGGAGAATATTGTCACGGGGGAAACGAAGGAAGTGCATGT GGTGCGAATGCGCCAGTATTCTGATCCGTCTCTGGTCGTGGAGGTCCGCG AAGTGTTTGAAATGACTAAACACCAAGGCGAGTTTGAGATCGCTGACGTG ATCGGTGTTGGCAAGGATCCGGCGCGAGTGGGAGAATATCGGGTGCAGAT CGCCTGGGTTGGTCTTGAGGATGAAGAACCAACGTGGGAACCGATGGCAA CTTACTACGCCGACGCTTCCTAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig146:483474..484346+

>mRNA_F-serratus_M_contig146.3248.1 ID=mRNA_F-serratus_M_contig146.3248.1|Name=mRNA_F-serratus_M_contig146.3248.1|organism=Fucus serratus male|type=CDS|length=1554bp|location=Sequence derived from alignment at F-serratus_M_contig146:483474..484346+ (Fucus serratus male)
TTTGGGGTGCCCAAGGCGTTCACCAGTGATGGTGGGACGCATTTTACCGG
GCAAGTGATGCGCATGGTGTCGTCCCGATTGAGGGTGGTTCCCCATTTTG
GCGTGGCGAATGTTTCGTGGTCGCATGGGACGATAGATCGGATGAACCGT
GAAGTCGTGAAGACGTTTCGTGCGGTTCTCAGCGAAAGACGTCGGCCTCC
GAGCGAGTGGCCGTTGGCGTTGGGGGCTGTGCAGTGGACTCTCAATTCGG
CGTACCGGGAGCGCATGGGGATGGCACCGTTCCAGATCATGGTGAGAAGA
ACGCCTGCGACAGCAATGTCGTTTGGGGTGCCCAAGGCGTTCACCAGTGA
TGGTGGGACGCATTTTACCGGGCAAGTGATGCGCATGGTGTCGTCCCGAT
TGAGGGTGGTTCCCCATTTTGGCGTGGCGAATGTTTCGTGGTCGCATGGG
ACGATAGATCGGATGAACCGTGAAGTCGTGAAGACGTTTCGTGCGGTTCT
CAGCGAAAGACGTCGGCCTCCGAGCGAGTGGCCGTTGGCGTTGGGGGCTG
TGCAGTGGACTCTCAATTCGGCGTACCGGGAGCGCATGGGGATGGCACCG
TTCCAGATCATGGTGAGAAGAACGCCTGCGACAGCAATGTCGCAGGAAGA
CTTACGGCGTGACGTGGTGAAGCGCGTTCGGGAGCAGCGTGAGCCTGTTC
GAGAGGTGAGCGGTCGTGGATACTTGCCGGTGTTTGAGGTTGGTGACTAT
GTCTTGGTGGTTCGGGTGAGGAAACCGGGTCGTGTGCCTAAGCTCGTACA
GACCTGGACTGGACCGTGGCGTGTTGTTCGTGTAGTGGAGAATATTGTCA
CGGGGGAAACGAAGGAAGTGCATGTGGTGCGAATGCGCCAGTATTCTGAT
CCGTCTCTGGTCGTGGAGGTCCGCGAAGTGTTTGAAATGACTAAACACCA
AGGCGAGTTTGAGATCGCTGACGTGATCGGTGTTGGCAAGGATCCGGCGC
GAGTGGGAGAATATCGGGTGCAGATCGCCTGGGTTGGTCTTGAGGATGAA
GAACCAACGTGGGAACCGATGGCAACTTACTACGCCGACGCTTCCTAGCA
GGAAGACTTACGGCGTGACGTGGTGAAGCGCGTTCGGGAGCAGCGTGAGC
CTGTTCGAGAGGTGAGCGGTCGTGGATACTTGCCGGTGTTTGAGGTTGGT
GACTATGTCTTGGTGGTTCGGGTGAGGAAACCGGGTCGTGTGCCTAAGCT
CGTACAGACCTGGACTGGACCGTGGCGTGTTGTTCGTGTAGTGGAGAATA
TTGTCACGGGGGAAACGAAGGAAGTGCATGTGGTGCGAATGCGCCAGTAT
TCTGATCCGTCTCTGGTCGTGGAGGTCCGCGAAGTGTTTGAAATGACTAA
ACACCAAGGCGAGTTTGAGATCGCTGACGTGATCGGTGTTGGCAAGGATC
CGGCGCGAGTGGGAGAATATCGGGTGCAGATCGCCTGGGTTGGTCTTGAG
GATGAAGAACCAACGTGGGAACCGATGGCAACTTACTACGCCGACGCTTC
CTAG
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