prot_F-serratus_M_contig1027.324.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1027.324.1
Unique Nameprot_F-serratus_M_contig1027.324.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length512
Homology
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BLAST of mRNA_F-serratus_M_contig1027.324.1 vs. uniprot
Match: D8LGW6_ECTSI (Centrosomal protein POC5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGW6_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 2.070e-59
Identity = 130/219 (59.36%), Postives = 153/219 (69.86%), Query Frame = 0 
Query:  302 ANAGLVARADVLAERLSGLRARTSKSSAVARCLSAWRANATRCRKERARNVAAGEHARLKLTTRTFRAWKLETRRAGNLRSKKAADLKLHTVSKEIVERYEAELFATRAALDEANNQIALEKARQREMEEGMRRTLARGMSAMNMEAMQLLNETREAGSGLLGYTGASA--GTRVSIVTATTAPRPGSA-------RQRMPEECPRPMAPPRPAVPSSR 511
            AN  L  +A+V  ERLS L ART   S +ARCL AWR  A R R ER++NV AG+HAR KL +RT  AW+ ETR+  N R +K ADLKLH +SKEI+ RYE EL +TRAALD+A +QIALEKARQREMEEGMRRTL RGMSAMNMEAM+L+ E R+AG    G +G +A  GTR S    T AP  G+          R+ EE PRP+ PPRPAVPSSR
Sbjct:    3 ANTVLEGKAEVFGERLSALHARTHGGSYLARCLCAWRGEAARIRAERSKNVTAGDHARRKLMSRTLGAWRGETRQRINSRGRKEADLKLHAISKEIIGRYETELSSTRAALDDAISQIALEKARQREMEEGMRRTLLRGMSAMNMEAMRLMTEARDAGEDEFGLSGTTATTGTRYSA-GGTDAPSFGARAAAGAAHHSRLSEEWPRPLTPPRPAVPSSR 220
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BLAST of mRNA_F-serratus_M_contig1027.324.1 vs. uniprot
Match: A0A7R9YBP3_9STRA (Centrosomal protein POC5 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBP3_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.580e-5
Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 0 
Query:  386 ADLKLHTVSKEIVERYEAELFATRAALDEANNQIALEKARQREMEEGMRRTLARGMSAMNMEAMQLLNETREA 458
            A  +L  V K I++RYEAEL   R  L EAN QI     ++R++EE +R+TL RGMS+M +EA+ L   T EA
Sbjct:  380 AKKQLQEVCKGIMQRYEAELLKMRQQLAEANEQIDRGVRQRRQLEENLRQTLMRGMSSMQLEALDLFRSTAEA 452
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1027.324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGW6_ECTSI2.070e-5959.36Centrosomal protein POC5 n=2 Tax=Ectocarpus TaxID=... [more]
A0A7R9YBP3_9STRA1.580e-547.95Centrosomal protein POC5 n=1 Tax=Pinguiococcus pyr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 398..432
NoneNo IPR availableCOILSCoilCoilcoord: 268..302
IPR033351Centrosomal protein POC5PANTHERPTHR28618FAMILY NOT NAMEDcoord: 272..493

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1027contigF-serratus_M_contig1027:32976..50692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1027.324.1mRNA_F-serratus_M_contig1027.324.1Fucus serratus malemRNAF-serratus_M_contig1027 32914..51315 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1027.324.1 ID=prot_F-serratus_M_contig1027.324.1|Name=mRNA_F-serratus_M_contig1027.324.1|organism=Fucus serratus male|type=polypeptide|length=512bp
MGDSSEELSFRALTSVREVAEEDAWRTSRQKLASKQHNKLHRGSFHHRSL
LEEASLNQRAPPNEGKGVEIREFVGYGSMPPTPAPQSNNGSFAPVERGET
LVRGNHESVSPRARPSSSGGGAASGSATNFLHVRGGGGGGGGSAAFVTDA
FMASSTVPTSREAAGFAVADNACDGVGGACSLSGARALAHDWLLRPGRGG
DNDDVVVTGTRDTEANREEDYKATEEGELRKQLEAFSNALREEFELKLLP
MATEGAAAFSRKAARVGHLRLEAQLNESAWETRQLEEESSRLRQQIAGLQ
IANAGLVARADVLAERLSGLRARTSKSSAVARCLSAWRANATRCRKERAR
NVAAGEHARLKLTTRTFRAWKLETRRAGNLRSKKAADLKLHTVSKEIVER
YEAELFATRAALDEANNQIALEKARQREMEEGMRRTLARGMSAMNMEAMQ
LLNETREAGSGLLGYTGASAGTRVSIVTATTAPRPGSARQRMPEECPRPM
APPRPAVPSSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033351POC5