mRNA_F-serratus_M_contig1459.3241.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1459.3241.1 vs. uniprot
Match: D7FH38_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH38_ECTSI) HSP 1 Score: 372 bits (956), Expect = 1.070e-111 Identity = 446/897 (49.72%), Postives = 508/897 (56.63%), Query Frame = 1
Query: 220 GGGHGN-----GGRRGNEH-ARTSIPAPNRTALNGMGEFLLTQVRRGASEQQWADWLKVPFEHACLAWDMSTIKRLLEAGVNGPYDRPRDPRFRRHTLLHLSAACGNTEVVNTLLRWGSAPDVACREPGEKAYTPLHRAALGGHGEASRVLIKAGADKNARTGGSGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLEAVANPNVQDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEGQADFEAPTGDHGSXXXXXXXXXXXDEVVGVLMDIGSDLEALDSGGWXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDGQRPSSLIATDLAEGDEPNEETNQTILKMLRIPRSEFEARRRRHIVKHAGSARPXXXXXXXXXXAYGPDSL--VAVFDSCGSGSLTGSVSGSYSGEGGRQLHRSPSVSAVAGGPSNKRPVRRTGSDGAQPLSY---SSGGGGTRARTPSREERSPPGLSLERTAERSVERFSE---RGKDEQVGG--ADVEDGRAGGY------------GYNAKHE------RPSPHDNRISTRGVVAYPLRRSPKNDGGSSGDSGRSPVARGVGSRGLSPPGGVNSKPQQQQAKGQGRPKSPPELTKNNPSPVSSGARSNSPPEGP------------------VPKRGGGNGAGSRRVMANGGKANAPHAAAAGEAECKPGGGA---GACDDKKEGGKEDTQEGLPRLLSRPYASLRAAAVDRDTNEGGEGRAGDKREVSAQQQMELEPVAPSSFLHDGRRSSAGRVSGAFDSGISVDVGAISTDDGGAAGSRSGXXXXXXXXXGSG-------DGLVAKRLAALDPFSYSKEDAASS 2724
GGGHGN GG RG A + P+R ALNGMGEF+LTQVRRGASEQQWADWLKVPFEHACLA DMSTI+RLLEAGVNGPYDRPRDPRFRRHTLLHLS+ACGNTE P EKAYTPLHRA LGGH E +RVLIKAGADK+ARTGGSGA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E++A+PN QDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EG+AD+EA T DHGS DEV+ VL+D+G D+E+ DSGGW TP+G+R +SLI TDLAEGDEPN ETN+TI KMLR+PR+E EARRRR K+AG+ RP XXXXAYGPDS+ + VFDS GSGS T G RQLHRSP+ A S + RR GA P + ++GGG R R+ +R F+E GK+ + G V D A G GY + RPS D R+ST VV P +GRSP A GVG G + G S P +A QG L SP + G ++PP+G P RR A G K E E G G G +D G+E + LPR+L RP A AAA DR T +G G + ++ PS DGRRSSAGR SG G ++D+ G G SG G G +G+VA R+AA DPFSYS++DA SS
Sbjct: 10 GGGHGNTNGGVGGHRGGPAGAMVAQRTPDRNALNGMGEFILTQVRRGASEQQWADWLKVPFEHACLARDMSTIRRLLEAGVNGPYDRPRDPRFRRHTLLHLSSACGNTE------------------PSEKAYTPLHRAVLGGHSEVARVLIKAGADKDARTGGSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESLADPNAQDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGRADYEAVTEDHGSTPLHVAAISGFDEVLTVLLDVGCDVESADSGGWTPLHCACAAARASCVNTLIMRGADPSAITPEGKRAASLIGTDLAEGDEPNSETNETIWKMLRVPRAESEARRRRRTAKNAGNQRPPPPYNDXXXXAYGPDSVGGIVVFDSAGSGSATXXXXXXXXXXGSRQLHRSPTHPQEAPAGSGGKGSRR----GAAPTNGHRDANGGGIPRERSATRRGDQQHQXXXXXXXXXXXXEFAEGQYAGKEGDLEGDTTGVVDPAAVGXXXXXXXXXXXXSGYKPTPDQYQSQPRPS-RDKRVSTDVVVGGVAAGRP---------AGRSPAAGGVGVAGETR-GAERSPPPTGKAGSQGERGVSFSL-----SPPAGGRGGSNPPQGSRKXXXXXXXXXXXXXXXXXPA--------DRRAAAMGEKHEDEDGDVEMELESAVGVGGEAQGRRNDNAAVGQESAE--LPRILRRP-AGAAAAAADRTTIDGARDARGASAASTGSGRIGGAGGRPS-IATDGRRSSAGRASGG--------AGVFNSDEAGEDGRSSGSTAFGERPGGGGGFSMGAAEGIVASRIAAYDPFSYSQKDAQSS 848
BLAST of mRNA_F-serratus_M_contig1459.3241.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 1.230e-13 Identity = 52/134 (38.81%), Postives = 76/134 (56.72%), Query Frame = 1
Query: 283 PNRTALNGMGEFLLTQVRRGASEQQWADWLKVPFEHACLAWDMSTIKRLLEAGVNGPYDRPRDPRFRRHTLLHLSAACGNTEVVNTLLRWGSAPDVACREPGEKAYTPLHRAALGGHGEASRVLIKAGADKNAR 684
P RT+L+G+G + V GAS +QWA+WL+VP EHA + + ++RLL+AG + R R R TLL +A GN +V++ L+R G+ DV + + LH A GH A++ L+ GAD N R
Sbjct: 5 PERTSLDGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGW-RGCRGR--TLLDAAALGGNADVMSALIRGGAGADVN-KVTVSSRRSALHTATCCGHEAAAKRLVLTGADVNFR 134
BLAST of mRNA_F-serratus_M_contig1459.3241.1 vs. uniprot
Match: D8LKW6_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW6_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 1.890e-13 Identity = 55/130 (42.31%), Postives = 71/130 (54.62%), Query Frame = 1
Query: 289 RTALNGMGEFLLTQVRRGASEQQWADWLKVPFEHACLAWDMSTIKRLLEAGVNGP--YDRPRDPRFRRHTLLHLSAACGNTEVVNTLLRWGSAPDVACREPGEKAYTPLHRAALGGHGEASRVLIKAGAD 672
RTALNG+ + L V A+ QW++WL+ P EHA D LL+AG +G ++ D TLL +A GN EVV TLL G ++ G+ T LHRA GGH EA+RVL+ AGAD
Sbjct: 7 RTALNGLEKMLFKLVSEKAASAQWSEWLRAPLEHAVAEGDNDLALALLKAGADGSAGWEGCGD-----RTLLQAAAEGGNEEVVLTLLDNGGVEELDVVS-GDNERTALHRALAGGHTEAARVLMLAGAD 130
BLAST of mRNA_F-serratus_M_contig1459.3241.1 vs. uniprot
Match: D7FT34_ECTSI (Ankyrin 2, neuronal isoform 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT34_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 6.330e-13 Identity = 55/137 (40.15%), Postives = 73/137 (53.28%), Query Frame = 1
Query: 283 PNRTALNGMGEFLLTQVRRGASEQQWADWLKVPFEHACLAWDMSTIKRLLEAGVNGPYD-RPRDPRFRRHTLLHLSAACGNTEVVNTLLRWGSAPDVACREPGEKAYTPLHRAALGGHGEASRVLIKAGADKNARTG 690
P R AL L+ V A+ +QWADW+++P EHA + LL+AG G R R R T+L +A GN VV+ +L G+ PD+ R G+K PLH AAL GH A+RVL+ AGA+ N G
Sbjct: 3 PKREALRESCRELVAVVIDDATPKQWADWVRIPVEHAAAQGKFDLVTALLKAGGTGASGVRGRGGR----TILDAAAKGGNGNVVSAILNAGAKPDLGIRS-GKKKRGPLHHAALHGHEAATRVLMMAGANVNLLDG 134
BLAST of mRNA_F-serratus_M_contig1459.3241.1 vs. uniprot
Match: A0A6H5K513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K513_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 6.090e-9 Identity = 44/135 (32.59%), Postives = 71/135 (52.59%), Query Frame = 1
Query: 289 RTALNGMGEFLLTQVRRGASEQQWADWLKVPFEHACLAWDMSTIKRLLEAGVNGPYDRPRDPRFRR---HTLLHLSAACGNTEVVNTLLRWGSAPDVACREPGEKAYTPLHRAALGGHGEASRVLIKAGADKNAR 684
R+ L G + V +GA+ +QWA+WL+VP EHA + ++ + +LL+AG +G + +R TLL + + GN V++ LL+ G PD P + L+++ L +R LI AGAD N +
Sbjct: 7 RSLLKGQEVEIFKLVSKGATPEQWAEWLRVPLEHAAASGNLDLVNKLLKAGADG------EAGWRGCGDRTLLDAALSGGNAGVMSALLQAGCGPDANVLAPST-GRSVLYQSILSNQKAVARELILAGADVNIK 134
BLAST of mRNA_F-serratus_M_contig1459.3241.1 vs. uniprot
Match: D7FYG4_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG4_ECTSI) HSP 1 Score: 68.9 bits (167), Expect = 2.510e-8 Identity = 53/138 (38.41%), Postives = 63/138 (45.65%), Query Frame = 1
Query: 268 TSIPAPNRTALNGMGEFLLTQVRRG----ASEQQWADWLKVPFEHACLAWDMSTIKRLLEAGVNGPYDRPRDPRFRRHTLLHLSAACGNTEVVNTLLRWGSAPDVACREPGEKAYTPLHRAALGGHGEASRVLIKAGA 669
T +RTAL + LL+ + QWA+WL+ P EHA D LL AG NG TLL +A GN EVV TLL +V E T LHRAA GGH A+RVL+ AGA
Sbjct: 8 TMATEEDRTALGRLETILLSINCSNWCGRTTSAQWAEWLRAPLEHAVAEGDKDLALTLLNAGANGGSGWKG---CNDRTLLQAAAEGGNEEVVRTLLDIEGMEEVDAVSSDEGG-TELHRAAAGGHTNAARVLMLAGA 141
BLAST of mRNA_F-serratus_M_contig1459.3241.1 vs. uniprot
Match: A0A6H5JQI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI2_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 7.720e-7 Identity = 41/107 (38.32%), Postives = 56/107 (52.34%), Query Frame = 1
Query: 355 QWADWLKVPFEHACLAWDMSTIKRLLEAGVNGP--YDRPRDPRFRRHTLLHLSAACGNTEVVNTLLRWGSAPDVACREPGEKAYTPLHRAALGGHGEASRVLIKAGA 669
QWA+WL++P EHA D LL+AG +G + DP TLL ++A GN VV TLL ++ + T LH AA GG+ +A+R+L AGA
Sbjct: 42 QWAEWLRIPLEHAVAEGDKDLALTLLKAGASGGSGWKGCDDP-----TLLQVAAEGGNEVVVRTLLDIAGTEELDAVSGDKDKRTALHSAAAGGYTDAARMLELAGA 143
BLAST of mRNA_F-serratus_M_contig1459.3241.1 vs. uniprot
Match: A0A6H5KKF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF4_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 3.610e-6 Identity = 41/124 (33.06%), Postives = 65/124 (52.42%), Query Frame = 1
Query: 343 ASEQQWADWLKVPFEHACLAWDMSTIKRLLEAGVNGPYDRPRDPRFRRHTLLHLSAACGNTE-VVNTLLRWGSAPDV-----------ACREPGEKAYTPLHRAALGGHGEASRVLIKAGADKN 678
A+ +QWA+WL+VP EHA + + +LL AG +G + + +L +AA G ++ VV++LLR + PDV +P +PL++A L GH +R+ I AGA+ N
Sbjct: 8 ATPEQWAEWLRVPLEHAAAQGSLVLVDKLLGAGADGSANY----KGCAGRILRQAAAVGGSKGVVSSLLRARAQPDVNEFVDDLSVLHEGHQPFPNFRSPLYQATLNGHEATARLPILAGANVN 127
BLAST of mRNA_F-serratus_M_contig1459.3241.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 58.2 bits (139), Expect = 5.560e-5 Identity = 46/150 (30.67%), Postives = 71/150 (47.33%), Query Frame = 1
Query: 289 RTALNGMGEFLLTQVRRGASEQQWADWLKVPFEHACLAWDMSTIKRLLEAGVN-GPYDRPRDPRFRRHTLLHLSAACGNTEVVNTLLRWGSAPDVACREPGEKAY----------------TPLHRAALGGHGEASRVLIKAGADKNART 687
R+ L+G + V+RGA+ +QW +WL+ P EHA ++ RL++AG N G R + R TLL +A + ++V T L G+ DV GE+ +PLH AA+ GH +L+ A +A+T
Sbjct: 11 RSRLDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGR----TLLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGEREALMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLLLNRACVHAKT 156 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1459.3241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1459.3241.1 >prot_F-serratus_M_contig1459.3241.1 ID=prot_F-serratus_M_contig1459.3241.1|Name=mRNA_F-serratus_M_contig1459.3241.1|organism=Fucus serratus male|type=polypeptide|length=842bp MLTVSEKGGGHGNGGRRGNEHARTSIPAPNRTALNGMGEFLLTQVRRGASback to top mRNA from alignment at F-serratus_M_contig1459:62754..134725+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1459.3241.1 ID=mRNA_F-serratus_M_contig1459.3241.1|Name=mRNA_F-serratus_M_contig1459.3241.1|organism=Fucus serratus male|type=mRNA|length=71972bp|location=Sequence derived from alignment at F-serratus_M_contig1459:62754..134725+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1459:62754..134725+ >mRNA_F-serratus_M_contig1459.3241.1 ID=mRNA_F-serratus_M_contig1459.3241.1|Name=mRNA_F-serratus_M_contig1459.3241.1|organism=Fucus serratus male|type=CDS|length=5052bp|location=Sequence derived from alignment at F-serratus_M_contig1459:62754..134725+ (Fucus serratus male)back to top |