prot_F-serratus_M_contig1458.3239.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1458.3239.1
Unique Nameprot_F-serratus_M_contig1458.3239.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length287
Homology
BLAST of mRNA_F-serratus_M_contig1458.3239.1 vs. uniprot
Match: A0A835YYX0_9STRA (DUF1279 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX0_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.880e-11
Identity = 45/123 (36.59%), Postives = 65/123 (52.85%), Query Frame = 0
Query:  165 AKLLWKRYGLVAIGTSLVLYVGGFGVVYALLATGLVDPNVDTSDVMQRLADFT-------GASSNDRLADYVKHMQHLVRTNKDYEHLFMAFVVNEALELPRDVVVLLITPRIARALGTAPSR 280
            A+++WKRYG+VAIGT   LY G F   Y L  +G V P VDT+  +++  D         G      L +  + + +L+ TN   +   M+ V  E  E  R V+VL +TP +AR LG AP +
Sbjct:   67 ARMMWKRYGIVAIGTYYALYAGMFVGGYLLFESGYVPP-VDTTLALEKAHDGIAWMVTKEGEFPPPGLTNTFRRLHYLIETNPQAKSAAMSLVATELAEPIRYVIVLAVTPTLARVLGRAPRK 188          
BLAST of mRNA_F-serratus_M_contig1458.3239.1 vs. uniprot
Match: F0W5K2_9STRA (Uncharacterized protein AlNc14C21G2167 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W5K2_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 4.810e-8
Identity = 42/124 (33.87%), Postives = 61/124 (49.19%), Query Frame = 0
Query:  166 KLLWKRYGLVAIGTSLVLYVGGFGVVYALLATGLVDPNVDTSDVMQRLADFTGASSNDRLA----DY--VKHMQHLVRTNKDYEHLFMAFVVNEALELPRDVVVLLITPRIARALGTAPSRDTK 283
            K LW++YGLVAIGT   +Y    G +Y  +  GL+  N +         DF   S+ +++     DY   K++  + R N       +A+V  +  E  R  + L ITPRIAR LG AP +  K
Sbjct:    7 KDLWRKYGLVAIGTYFTMYGIVLGTIYISIENGLISKNRNVRSNKDTTTDFDVVSTTNKMIALAEDYGLAKYLD-VERVNSKTGSFVIAWVATKFTEPIRLAITLAITPRIARFLGRAPKKMLK 129          
BLAST of mRNA_F-serratus_M_contig1458.3239.1 vs. uniprot
Match: A0A024GSA6_9STRA (DUF1279 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GSA6_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.000e-7
Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = 0
Query:  166 KLLWKRYGLVAIGTSLVLYVGGFGVVYALLATGLVDPNVDTSDVMQRLADFTGASSNDRLA----DY--VKHMQHLVRTNKDYEHLFMAFVVNEALELPRDVVVLLITPRIARALGTAPSRDTK 283
            K LW++YGLVAIGT   +Y    G +Y  +  GL+  N +T        +F   S+ +++     DY  VK++  + R N       +A+V  +  E  R  + L ITPRIAR LG AP +  K
Sbjct:   65 KDLWRKYGLVAIGTYFTMYGIVLGSIYISIENGLISKNRNTRLNKDTTTNFDVVSTTNKMIALAEDYGLVKYLD-VERVNSKTGSFVIAWVATKFTEPIRLAITLAITPRIARFLGRAPKKIVK 187          
BLAST of mRNA_F-serratus_M_contig1458.3239.1 vs. uniprot
Match: A0A3R7J9G6_9STRA (DUF1279 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J9G6_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.870e-6
Identity = 42/126 (33.33%), Postives = 61/126 (48.41%), Query Frame = 0
Query:  166 KLLWKRYGLVAIGTSLVLYVGGFGVVYALLATGLVDPNVDTSDVMQRLADFTGASSNDRLADYVKHM---QHLV--RTNKDYEHLFMAFVVNEALELPRDVVVLLITPRIARALGTAPSRDTKETR 286
            K LW++YG+VAIGT L LY    G +Y  +  G V  +   S    +   F   ++ ++   + + M   Q+L   R N       +A+V  +  E  R  V L +TPRIAR LG AP    K +R
Sbjct:    8 KDLWRKYGIVAIGTYLSLYGAVLGSIYVAIDQGWVRTSKRRSSREGQEESFNLITTTNKFVKFAEDMGIAQYLEVERVNSKTGSFLLAWVATKFTEPVRLAVTLAVTPRIARFLGRAPKLPLKVSR 133          
BLAST of mRNA_F-serratus_M_contig1458.3239.1 vs. uniprot
Match: H3GLJ1_PHYRM (DUF1279 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLJ1_PHYRM)

HSP 1 Score: 58.2 bits (139), Expect = 1.890e-6
Identity = 44/128 (34.38%), Postives = 62/128 (48.44%), Query Frame = 0
Query:  166 KLLWKRYGLVAIGTSLVLYVGGFGVVYALLATGLVDPNVDTSDVMQRLAD-----FTGASSNDRLADYVKHMQHLV--RTNKDYEHLFMAFVVNEALELPRDVVVLLITPRIARALGTAPSRDTKETR 286
            K LW++YG+VAIGT L +Y    G VY  +  G V  N  TS   +  +D      T  +   R A+ +   Q+L   R N       +A++  +  E  R  + + +TPRIAR LG AP    K TR
Sbjct:   72 KDLWRKYGVVAIGTYLTMYGAVLGSVYLAIDQGWVRTNKRTSSKGEGQSDETFNLVTTTNKFVRFAEDLGIAQYLEVERVNSKTGTFLLAWIATKFTEPVRLALTIAVTPRIARFLGRAPKLPPKATR 199          
BLAST of mRNA_F-serratus_M_contig1458.3239.1 vs. uniprot
Match: A0A836CLB5_9STRA (DUF1279 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB5_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 4.750e-6
Identity = 42/128 (32.81%), Postives = 61/128 (47.66%), Query Frame = 0
Query:  166 KLLWKRYGLVAIGTSLVLYVGGFGVVYALLATGLVDPN------VDTSDVMQ----RLADFTGASSNDRLADYVKHMQHLVRTNKDYEHLFMAFVVNEALELPRDVVVLLITPRIARALGTAPSRDTK 283
            K +W+RYGLVA+GT   +YV   G +Y +   G +  +          D +Q    RL D+  A  N   A Y K  Q        + +  +A++  +  E  R +  + ITPRIARALG AP +  K
Sbjct:    2 KEMWRRYGLVAVGTYFGIYVATLGGLYLVFDYGFMTASDMPAGAAHAGDTLQALVERLPDWAQAKVN---ALYAKMQQ-----EPGFRNFVLAWLTTKVTEPVRVLATVGITPRIARALGRAPKKLPK 121          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1458.3239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835YYX0_9STRA2.880e-1136.59DUF1279 domain-containing protein n=1 Tax=Tribonem... [more]
F0W5K2_9STRA4.810e-833.87Uncharacterized protein AlNc14C21G2167 n=1 Tax=Alb... [more]
A0A024GSA6_9STRA2.000e-734.68DUF1279 domain-containing protein n=1 Tax=Albugo c... [more]
A0A3R7J9G6_9STRA1.870e-633.33DUF1279 domain-containing protein n=3 Tax=Phytopht... [more]
H3GLJ1_PHYRM1.890e-634.38DUF1279 domain-containing protein n=1 Tax=Phytopht... [more]
A0A836CLB5_9STRA4.750e-632.81DUF1279 domain-containing protein (Fragment) n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..195
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 196..286
NoneNo IPR availableTMHMMTMhelixcoord: 172..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1458contigF-serratus_M_contig1458:188693..194296 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1458.3239.1mRNA_F-serratus_M_contig1458.3239.1Fucus serratus malemRNAF-serratus_M_contig1458 188331..194364 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1458.3239.1 ID=prot_F-serratus_M_contig1458.3239.1|Name=mRNA_F-serratus_M_contig1458.3239.1|organism=Fucus serratus male|type=polypeptide|length=287bp
MMSLRVSRVTGTINQLLGQNHSGPSTTYAKIMKPSQLQYIAASITRYATG
GVLTRRLDRLSPYDRRLSKTAAATVVVVLNDRRHFSGHSGRPGNKRTEGS
TQKRGDTKESYTFLDREGHGHLAGQSGKRDLPAGKSAAGFGEDDEDVDFK
NMTMWQRVKYVRSTAKLLWKRYGLVAIGTSLVLYVGGFGVVYALLATGLV
DPNVDTSDVMQRLADFTGASSNDRLADYVKHMQHLVRTNKDYEHLFMAFV
VNEALELPRDVVVLLITPRIARALGTAPSRDTKETR*
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