mRNA_F-serratus_M_contig1026.322.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5L8A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8A7_9PHAE) HSP 1 Score: 202 bits (513), Expect = 6.830e-59 Identity = 114/217 (52.53%), Postives = 139/217 (64.06%), Query Frame = 1 Query: 1 MEIFLPSVRVSSASGTKPCGEPTCTTVTVPAGPVYQCSCDR*MHVFCGRGIEEEGYGQQRECTDCQKNS--KEAGGYQTEMVANLAELIEDWDTVHVRRFRSGCRGLSDAGQAIMLEVTEILPKKRGGFSTQTVIRCWLKAGIFSSNHENALRRKDMQPDREDKEDTAIIDSTATIDDLCNLVAKITMPTSITD--AISMPRILTDILCIEKNPQLT 639 ME FLPS SSA+G +PCGEPTC + V+QC C R MH FCGRGI EEGYGQQREC+DCQK+ +AG + M + E +D R GCRGLSDAGQA ML+VTEIL +K FS QTV+RCWLKA I HENAL+ +D + DREDKE A +DDLC++V K+++P S D A SMPR+L+D L +E LT Sbjct: 1 MERFLPSAGESSAAGLRPCGEPTCQQKSQLVSAVHQCPCGRSMHAFCGRGIGEEGYGQQRECSDCQKSKGGDQAGSSSSPMEVDAEENEQD--------SRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTVVRCWLKATILPREHENALKGRDTRLDREDKE-------AAALDDLCDMVKKMSLPESAKDLDARSMPRVLSDNLFVESTSGLT 202
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5K766_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K766_9PHAE) HSP 1 Score: 152 bits (383), Expect = 1.060e-41 Identity = 76/125 (60.80%), Postives = 98/125 (78.40%), Query Frame = 3 Query: 651 VRGAITTWLNVEDDLAVLEAEIDMEIQAVENNFANLEVDSASSEDEDGDGRSESCIAPSLTEADVRSRLKEVCYYLYPNGKNGEYRKTLYLPSRSVHSFIHKSRAKRKAREGRETQATLRDLWRN 1025 VR A+ TWL+VEDD VLE E+ ME++ VENN ANL VD S++DEDG GR ESC+ S+TEA++R L++V YLY NGK+GEYR+T YL S+ VHSF HK++ KR+A+EG E QATLRD+WR+ Sbjct: 35 VREAVKTWLSVEDDPDVLEEEVAMELEIVENNLANLAVDDDSTDDEDGGGRPESCVTSSMTEAEIRGSLEKVRSYLYANGKDGEYRETQYLLSKVVHSFTHKTQVKRRAKEGGELQATLRDMWRS 159
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5JEY2_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY2_9PHAE) HSP 1 Score: 162 bits (409), Expect = 1.240e-41 Identity = 86/143 (60.14%), Postives = 105/143 (73.43%), Query Frame = 1 Query: 223 YQTEMVANLAELIEDWDTVHVRRFRSGCRGLSDAGQAIMLEVTEILPKKRGGFSTQTVIRCWLKAGIFSSNHENALRRKDMQPDREDKEDTAIIDSTATIDDLCNLVAKITMPTSITDAISMPRILTDILCIEKNPQLTAAKL 651 Y+TEMVA LA+LI+ WD V R+ R GCRGL+DAGQA ML+VTEIL +K FS+QTVIRCWLKA I HENAL+ KD + DREDKEDTAIID DLC +V+K++MP S TD+ S R+LTD L +EK LT A++ Sbjct: 290 YKTEMVARLADLIDVWDAVRARKIRRGCRGLNDAGQATMLDVTEILSEKWESFSSQTVIRCWLKANILPREHENALKGKDTRLDREDKEDTAIID------DLCEMVSKMSMPASATDSRSTARVLTDNLFVEKASGLTDAEV 426
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5JV64_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV64_9PHAE) HSP 1 Score: 162 bits (409), Expect = 5.170e-41 Identity = 86/143 (60.14%), Postives = 105/143 (73.43%), Query Frame = 1 Query: 223 YQTEMVANLAELIEDWDTVHVRRFRSGCRGLSDAGQAIMLEVTEILPKKRGGFSTQTVIRCWLKAGIFSSNHENALRRKDMQPDREDKEDTAIIDSTATIDDLCNLVAKITMPTSITDAISMPRILTDILCIEKNPQLTAAKL 651 Y+TEMVA LA+LI+ WD V R+ R GCRGL+DAGQA ML+VTEIL +K FS+QTVIRCWLKA I HENAL+ KD + DREDKEDTAIID DLC +V+K++MP S TD+ S R+LTD L +EK LT A++ Sbjct: 495 YKTEMVARLADLIDVWDAVRARKIRRGCRGLNDAGQATMLDVTEILSEKWESFSSQTVIRCWLKANILPREHENALKGKDTRLDREDKEDTAIID------DLCEMVSKMSMPASATDSRSTARVLTDNLFVEKASGLTDAEV 631
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5KIE7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIE7_9PHAE) HSP 1 Score: 155 bits (392), Expect = 1.190e-40 Identity = 81/139 (58.27%), Postives = 98/139 (70.50%), Query Frame = 1 Query: 223 YQTEMVANLAELIEDWDTVHVRRFRSGCRGLSDAGQAIMLEVTEILPKKRGGFSTQTVIRCWLKAGIFSSNHENALRRKDMQPDREDKEDTAIIDSTATIDDLCNLVAKITMPTSITDAISMPRILTDILCIEKNPQLT 639 Y+TEMVA LA+LIEDWDTV R+F+ GC+GLSDAGQA ML+VTEI +K F QTVI CWLKAGI H N L+ D + DREDK+D AIID LC++V+K+ MP S+T SMPR+LTD L +EK LT Sbjct: 124 YKTEMVARLADLIEDWDTVRARKFQRGCQGLSDAGQATMLDVTEIGSQKWRSFDVQTVITCWLKAGILPREHCNVLKGMDTRVDREDKDDAAIIDG------LCDMVSKMAMPASVTGYRSMPRVLTDNLLVEKGTDLT 256
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE) HSP 1 Score: 157 bits (396), Expect = 1.420e-39 Identity = 81/139 (58.27%), Postives = 97/139 (69.78%), Query Frame = 1 Query: 223 YQTEMVANLAELIEDWDTVHVRRFRSGCRGLSDAGQAIMLEVTEILPKKRGGFSTQTVIRCWLKAGIFSSNHENALRRKDMQPDREDKEDTAIIDSTATIDDLCNLVAKITMPTSITDAISMPRILTDILCIEKNPQLT 639 Y+TEMVA LA+LIEDWDTV R+ + GCRGLSDAGQA ML+VTEI +K F QTVIRCWLKAGI H L+ D + DREDK+D AIID LC++ K++MP S+TD SMPR+LTD L +EK LT Sbjct: 327 YKTEMVARLADLIEDWDTVRARKIQRGCRGLSDAGQATMLDVTEICSQKWRSFDVQTVIRCWLKAGILPREHCKVLKGMDTRLDREDKDDAAIIDG------LCDMATKMSMPASVTDCRSMPRVLTDNLFVEKGTDLT 459
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5KXD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXD1_9PHAE) HSP 1 Score: 146 bits (369), Expect = 3.670e-38 Identity = 77/139 (55.40%), Postives = 97/139 (69.78%), Query Frame = 1 Query: 223 YQTEMVANLAELIEDWDTVHVRRFRSGCRGLSDAGQAIMLEVTEILPKKRGGFSTQTVIRCWLKAGIFSSNHENALRRKDMQPDREDKEDTAIIDSTATIDDLCNLVAKITMPTSITDAISMPRILTDILCIEKNPQLT 639 Y+TEMV LA+LIEDWDTV R+ + CRGL+DAGQA ML+VTEI +K F QTVIRCWLKAGI H N L+ D + DREDK++ AI+D LC++V+K++MP S+TD+ SM R LTD L +EK LT Sbjct: 13 YKTEMVERLADLIEDWDTVRARKIQGECRGLNDAGQATMLDVTEICSQKWRSFDVQTVIRCWLKAGILPREHCNVLKCMDTRLDREDKDNVAIVDG------LCDMVSKMSMPASVTDSRSMLRGLTDDLFVEKGTDLT 145
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5K3T6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T6_9PHAE) HSP 1 Score: 135 bits (340), Expect = 2.490e-35 Identity = 73/126 (57.94%), Postives = 94/126 (74.60%), Query Frame = 3 Query: 651 VRGAITTWLNVEDDLAVLEAEIDMEIQAVENNFANLEVDSASSEDEDGDGRSESCIAPSLTEADVRSRLKEVCYYLYPNGKNGEYRKTLYLPSRSVHSFIHKSRAKRKAREGRETQATLRDLWRNS 1028 VR AI TWL+VEDD +VLE E+ +E++ VE N ANLEVD ASS+DEDG R SC S+TEA VR+ L+ V YLY NGK+GEYR+T L S++VHSF H+++ KR+++E QATLRD+WR S Sbjct: 34 VRKAIKTWLSVEDDPSVLEDEVALELEIVEQNMANLEVD-ASSDDEDGGDRPASCFTSSMTEAQVRASLESVRSYLYANGKDGEYRETQRLLSKTVHSFTHETQVKRRSKERGALQATLRDMWRKS 158
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5K2S0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2S0_9PHAE) HSP 1 Score: 134 bits (336), Expect = 7.000e-35 Identity = 65/124 (52.42%), Postives = 95/124 (76.61%), Query Frame = 3 Query: 651 VRGAITTWLNVEDDLAVLEAEIDMEIQAVENNFANLEV-DSASSEDEDGDGRSESCIAPSLTEADVRSRLKEVCYYLYPNGKNGEYRKTLYLPSRSVHSFIHKSRAKRKAREGRETQATLRDLW 1019 VR A++TWL+VEDD VL E+++E++ V N + + V D SSE+ED DGR ESC+ +++EA+VR RL++V YLY NG++GEY +T+YL S++VHSF H+++ KR+ +EG E QATLRD+W Sbjct: 22 VRSAVSTWLSVEDDEEVLREEVELEMEEVTENMSRVHVEDDVSSEEEDQDGRQESCVTSTISEAEVRPRLEDVRSYLYANGRDGEYSETVYLLSKTVHSFTHETQVKRRTKEGGEVQATLRDVW 145
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5JSR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR4_9PHAE) HSP 1 Score: 144 bits (364), Expect = 1.530e-34 Identity = 76/139 (54.68%), Postives = 94/139 (67.63%), Query Frame = 1 Query: 223 YQTEMVANLAELIEDWDTVHVRRFRSGCRGLSDAGQAIMLEVTEILPKKRGGFSTQTVIRCWLKAGIFSSNHENALRRKDMQPDREDKEDTAIIDSTATIDDLCNLVAKITMPTSITDAISMPRILTDILCIEKNPQLT 639 Y+TEM+A LA+L+EDWDTV R+ + GC GLSDA QA ML+VTEI +K F QT IRCWLKAGI H N L+ D DREDK+D AIID LC++V+ ++MP S+ D SMPR+LTD L +EK LT Sbjct: 13 YKTEMLARLADLVEDWDTVRARKIQRGCWGLSDARQATMLDVTEIYSQKWRSFDVQTGIRCWLKAGILPREHCNVLKGMDTWLDREDKDDAAIIDG------LCDMVSNMSMPASVMDYRSMPRVLTDNLFVEKGTDLT 145 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1026.322.1 >prot_F-serratus_M_contig1026.322.1 ID=prot_F-serratus_M_contig1026.322.1|Name=mRNA_F-serratus_M_contig1026.322.1|organism=Fucus serratus male|type=polypeptide|length=210bp MLAQGRHLFQQSRERPQEEGYATRSRRQGGHGHHRQHGHHRRSLQLGREDback to top mRNA from alignment at F-serratus_M_contig1026:186115..193542+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1026.322.1 ID=mRNA_F-serratus_M_contig1026.322.1|Name=mRNA_F-serratus_M_contig1026.322.1|organism=Fucus serratus male|type=mRNA|length=7428bp|location=Sequence derived from alignment at F-serratus_M_contig1026:186115..193542+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1026:186115..193542+ >mRNA_F-serratus_M_contig1026.322.1 ID=mRNA_F-serratus_M_contig1026.322.1|Name=mRNA_F-serratus_M_contig1026.322.1|organism=Fucus serratus male|type=CDS|length=1260bp|location=Sequence derived from alignment at F-serratus_M_contig1026:186115..193542+ (Fucus serratus male)back to top |