prot_F-serratus_M_contig1455.3227.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1455.3227.1
Unique Nameprot_F-serratus_M_contig1455.3227.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length159
Homology
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BLAST of mRNA_F-serratus_M_contig1455.3227.1 vs. uniprot
Match: D7FLT0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLT0_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 2.520e-19
Identity = 57/139 (41.01%), Postives = 86/139 (61.87%), Query Frame = 0 
Query:    1 MRSHVLLLLFLAIMALAHPTFA-------VRRRRGDRKAGQVKGPNQHDKDMIRLRLMKTVSQEM-PDANEEEILQRVDELTEARLKEAFPEFYLPKPQPK-KFSDSDDIWENGTVVRYMARAMMVILAIAGFVAFKEQ 130
            M+S+ LLL  L  +AL  P+ A          R+GD++       +  DK++ ++R  K   QEM  DA+E  +L+RV+E+T+  L+E+FP+ Y P P  + K  DSDD+WENGTVVRY+AR M ++LA AG  A+ ++
Sbjct:    1 MKSYTLLLAALIAIALVCPSCAKGFGRKRTMARQGDQEP-MAATVSTRDKELAKMRAYKAAVQEMGEDADELAMLKRVEEITDKLLRESFPDAYKPAPAKRPKAVDSDDVWENGTVVRYLARVMALLLAAAGLYAWNDK 138
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1455.3227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLT0_ECTSI2.520e-1941.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..127
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..109
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.91
NoneNo IPR availableTMHMMTMhelixcoord: 5..22
NoneNo IPR availableTMHMMTMhelixcoord: 105..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1455contigF-serratus_M_contig1455:9612..17428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1455.3227.1mRNA_F-serratus_M_contig1455.3227.1Fucus serratus malemRNAF-serratus_M_contig1455 9584..18642 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1455.3227.1 ID=prot_F-serratus_M_contig1455.3227.1|Name=mRNA_F-serratus_M_contig1455.3227.1|organism=Fucus serratus male|type=polypeptide|length=159bp
MRSHVLLLLFLAIMALAHPTFAVRRRRGDRKAGQVKGPNQHDKDMIRLRL
MKTVSQEMPDANEEEILQRVDELTEARLKEAFPEFYLPKPQPKKFSDSDD
IWENGTVVRYMARAMMVILAIAGFVAFKEQLMGRETFDGRRIVRATRKKK
DKKDKKDK*
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