mRNA_F-serratus_M_contig1437.3122.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 142 bits (358), Expect = 9.070e-33 Identity = 105/302 (34.77%), Postives = 154/302 (50.99%), Query Frame = 1
Query: 298 ADLRAATRGAIMAG--DTGFVRHLLLQRE--TFVGAKPKLMKDLHLAVKLGNEPIVTLLLRHGAGVNALDSRGRTPLXXXXXXXXXXXXXXXXXXXADMGIIFTDENNYEHCALSFAARMGHEDVMRALIKQGLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGGTALHASAVMRCYDATAALLRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLLTRG--------DGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRAF 1167
A +R A + A+ +G D V+ +L+ + + + LH++ G E V LL GA N LD++GRTPL D + + N + L FAA+ G V+RA+++ G+DVN+ G T+LH AA+ N+ +I++LVE GA +E + T + C++A AL +HGA+++AR+ G TPL ARQAGR G I D+LL G DG ++ V + + ++ER+R L E APADRAWRRRG+LVLCRAF
Sbjct: 48 ASMRVALKEAVDSGHVDESAVKPILVMAKVASLLSESVDSSDQLHVSASQGQEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNR-SYSVLDFAAQKGDACVLRAILQHGVDVNRRTD-GYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDD---DCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEV--VGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAF 342
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 137 bits (346), Expect = 2.240e-31 Identity = 96/260 (36.92%), Postives = 134/260 (51.54%), Query Frame = 1
Query: 412 DLHLAVKLGNEPIVTLLLRHGAGVNALDSRGRTPLXXXXXXXXXXXXXXXXXXXADMGIIFTDENNYEHCALSFAARMGHEDVMRALIKQGLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGGTALHASAVMRCYDATAALLRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLLTRG--------DGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRAF 1167
LH+A G E V LL GA N LD++GRTPL D + + N + L AA+ G V+RA+++ G+DVN+ G T+LH AA+ N+ +I++LVE GA +E + T + + C++A AL +HG++++AR+ G TPL ARQAGR G I D+LL G DG ++ V + + +VER+R L E AP DRAWRRRG LVLCRAF
Sbjct: 41 QLHVAASQGQEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNR-SYSVLDLAAQKGDACVLRAILQHGVDVNRRTD-GYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDD---DCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEV--VGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAF 293
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 110 bits (276), Expect = 1.340e-22 Identity = 82/208 (39.42%), Postives = 115/208 (55.29%), Query Frame = 1
Query: 613 EHCALSFAARMGHEDVMRALIKQGLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGGTALHASAVMRCYDATAAL---LRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLL--------TRGDGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRAFPERVRLGRPRDA 1203
E AL A GH D +R LI+ G DV+ N G+ ALH+A N+ ++++L+ GA+ + +SE+ G T LH +A+ R A L L+HGA V A+ G + L VA +AG+ G +E+ DLLL G+G D + + E+D EE E +RKL APADRAWRRR LVLCRA P++++L R A
Sbjct: 160 EISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARS-MSES--GHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVP--EEDRIPEE--FEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSDRIA 360
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 112 bits (279), Expect = 6.170e-22 Identity = 82/188 (43.62%), Postives = 109/188 (57.98%), Query Frame = 1
Query: 682 GLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGGTALHASAVMRCYDATAALLRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLLTRG--------DGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRA-FPE-RVRLGRPRDAAHAV 1215
G DVN + G+TAL A+ ++ +I++L E GA+IEA+ + G T LH ++ A ALLRHGASV +NA TPLH VA +AG G E+ DLLL RG +GH D++ + E DS E+ V+R+RKL +APADRAWRRRG L+L RA +P RV+ G A A
Sbjct: 547 GGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQAN----GSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTE--ESDSLAED--VDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAA 726
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: D7G0W2_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W2_ECTSI) HSP 1 Score: 102 bits (255), Expect = 1.250e-20 Identity = 95/286 (33.22%), Postives = 134/286 (46.85%), Query Frame = 1
Query: 625 LSFAARMGHEDVMRALIKQGLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGGTALHASAVMRCYDATA-ALLRHGASVKARNA-FGYTPLHGVARQAGRDGALEIADLLLTRG--------DGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRA---WRRRGILVLCRAFPERVRLGRPRDAAHAVEAPVGKEGGSSCTTLDRAQESGRTVFYSEVSEYNGGQKRSAPGPATTAAEDFFCRAVINTLTLAEDGIFRRIVAFL 1443
L + R D+ R ++++G +++S G TALH+A +I++LV GA++EA+++ A T LH +A A AL RHGA V A+ G TPLH A+ + + E D LL G G PLD+++ R D N ER R + AP DRA W RR V+CRA P+RVRL D TT RA+++ + S G + SA D F RA+ + + L EDG+FR+IVAFL
Sbjct: 19 LDCSVRSDGMDLTRQVLQRGAIATESSSDGCTALHWAGWNMNASAIDLLVGAGANLEAKIA-ADAEATPLHLAARQAGNAAVIEALARHGADVHAQETPSGNTPLHVAAQNCTTESSWETVDALLKAGADETRLDCQGQTPLDVLEA-RIAAGDLMGASVNEAERTRSVLVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLTVVDDT----------------TTSPRAKKTMAAAATAVGSGRRGANRDSA---------DNFQRAMRSLIRLKEDGLFRKIVAFL 277
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: D8LH19_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH19_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 4.420e-14 Identity = 71/194 (36.60%), Postives = 89/194 (45.88%), Query Frame = 1
Query: 625 LSFAARMGHEDVMRALIKQGLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGG--------TALHASAVMRCYDAT--AALLRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLLTRGDGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRAFPER 1176
L A + RAL+K G DV + G TALH+AA R +P IE LV GAD+EAR S+ G T LH +A R + A LL+ GA V A + G TPLH VA D + D T ++ E +++L +APADRAWRRRG LVL R ER
Sbjct: 244 LQLACSSREAAMTRALLKHGADVKSCDGFGFTALHWAAYRGKPCVIEALVGAGADLEARSSQVWLPGHRDSHVGLTPLHIAAFFRRSNTPRMALLLQRGADVNAADGHGRTPLHIVAAAPATDSSAADIDFXXXXXXXXXXXXXXXXXXXXX---VVTRSSSAEPLKRLLRRAPADRAWRRRGPLVLSRVRAER 434
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 5.510e-14 Identity = 117/338 (34.62%), Postives = 161/338 (47.63%), Query Frame = 1
Query: 241 SNGEPLRERSANLGGGKNEADLRAATRGAIMAGDTGFVRHLLLQRETFVGAKPKLMKDLHLAVKLGNEPIVTLLLRHGAGVNALDSRGRTPLXXXXXXXXXXXXXXXXXXXADM------GIIFTDENNYEHCALSFAARMGHEDVMRALIKQGLDVNK--ANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGG---GTALHASAVMRCYDATAALLRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLLTRG--------DGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRAFPERVRLGRPR 1197
S E L R + GG N D + I AG + R+ G P LH AV+ G + +V LL GA N D XXXXXXXXXXXXXXXXXXXA+ G + + + ++ A ++GH V++A ++ G+D + + G TALH AA+ NQ ++E+L+E GAD + V G T L A+A +A LLR+GA + G PLH A + G +E+ DLLL G G+ P ++ + D TEE + L +APADRAWRRRG +V+ RA E R+ R
Sbjct: 48 SGNEDLVTRLLDTGGDVNRLDHLGRSTTLISAGAD------VNDRDPAEGCYP-----LHAAVRRGCDRVVADLLAAGAAPNNTDGXXXXXXXXXXXXXXXXXXXXXXXXXAEFTFESCAGYVVIASEVFPNAEINVATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADAD--VESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQ-TPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPD--ATEERAGALV--LLARAPADRAWRRRGWVVMLRARSETERIAAQR 367
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: D7FVI9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI9_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 6.890e-14 Identity = 101/348 (29.02%), Postives = 143/348 (41.09%), Query Frame = 1
Query: 436 GNEPIVTLLLRHGAGVNALDSRGRTPLXXXXXXXXXXXXXXXXXXXADMGIIFTDENNYEHC------ALSFAARMGHEDVMRALI-KQGLDVNKANSRGLTALHYAAVRNQPRSI-EILVENGADIEARVSEAGGGG----TALHASAVMRCYDATAALLRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLLTRGDGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRAFPERVRLGRPRDAAHAVEAPVGKEGGSSCTTLDRAQESGRTVFYSEVSEYNGGQKRSAPGPATTAAEDFFCRAVINTLTLAEDGIFRRIVAFL 1443
G IV LL GA ++ + GRTPL AD+ + + ++C AL FA GH V+ AL+ K GL+++ ++ G TALH A + + I E L+ GAD + R++ G TA H+ + Y L+ HGA V +R FG TPLH + D L LLL G D N N++ D+ +R+L ADRAWRRRG LV+ R ++ G AA A A + GGS GG+ E F + L + E+G+FR +V+FL
Sbjct: 131 GYNEIVIALLNKGADKDSPAANGRTPLMEASRKGHLPVVKTLLNADADVTLAAHGLTDEDYCLGDNCTALHFATAGGHLGVVNALLSKGGLEIDAVDTDGTTALHLAVIMGRSLPIMETLLVAGADPDIRINTGGVQDCPLETACHSKDNIGTYHVCKTLIDHGADVNSRCPFGSTPLHHACDYSQSDAVLR---LLLQAG--------ADENALNDDGDTPG-------VRELL----ADRAWRRRGWLVMLRL--RTLKAGGDGGAAGARSAK--QRGGSG-----------------------GGE------------ESFNLSEAVEWLGVVEEGVFRNVVSFL 417
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: A0A6H5JN15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN15_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 8.890e-14 Identity = 56/148 (37.84%), Postives = 81/148 (54.73%), Query Frame = 1
Query: 457 LLLRHGAGVNALDSRGRTPLXXXXXXXXXXXXXXXXXXXADMGIIFTDENNYEHCALSFAARMGHEDVMRALIKQGLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGGTALHASAVMRCYDATAALLRHGASV 900
LLLR GA V+ LD++GRTP+ D + + + AL AAR GH +VM+ALI+ G+DV+ +S GLTALH AA + +IE L+E GA+I+A+ E G T LH ++ +A +L++H A V
Sbjct: 100 LLLRDGAEVDVLDTKGRTPIHLSAKRGSLSAVQALLAAGGDSSLRYGKGEAFS--ALGLAARGGHVEVMQALIRHGVDVDAPDSNGLTALHSAATGDAVGAIETLMEAGANIDAQGGEDGARYTPLHMASEKGLSEAALSLVKHRADV 245
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 2.310e-13 Identity = 71/219 (32.42%), Postives = 100/219 (45.66%), Query Frame = 1
Query: 604 NNYEHCALSFAARMGHEDVMRALIKQGLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGGTALHASAVMRCYDATAALLRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLLTRG--------DGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRAFPERVRLGRPRDAAHAVEAPVGKE 1236
N ++ L FAA +++R LI G++VN A + G TALH+AA N+ +I++LV GADI+AR G A+ R G++++ LLL G G D + R TE + ER R L +APADRAWRRRG+LVLC A+P+R++LG D A V+ +G E
Sbjct: 167 NEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFG-TALHWAAKANRANAIDVLVGAGADIQAR--NMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRF-----PSTEPGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQLG--GDLAGLVDRVLGLE 375 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1437.3122.1 >prot_F-serratus_M_contig1437.3122.1 ID=prot_F-serratus_M_contig1437.3122.1|Name=mRNA_F-serratus_M_contig1437.3122.1|organism=Fucus serratus male|type=polypeptide|length=411bp MRCLSPLQKSNGEPLRERSANLGGGKNEADLRAATRGAIMAGDTGFVRHLback to top mRNA from alignment at F-serratus_M_contig1437:87159..89346- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1437.3122.1 ID=mRNA_F-serratus_M_contig1437.3122.1|Name=mRNA_F-serratus_M_contig1437.3122.1|organism=Fucus serratus male|type=mRNA|length=2188bp|location=Sequence derived from alignment at F-serratus_M_contig1437:87159..89346- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1437:87159..89346- >mRNA_F-serratus_M_contig1437.3122.1 ID=mRNA_F-serratus_M_contig1437.3122.1|Name=mRNA_F-serratus_M_contig1437.3122.1|organism=Fucus serratus male|type=CDS|length=2466bp|location=Sequence derived from alignment at F-serratus_M_contig1437:87159..89346- (Fucus serratus male)back to top |